Spla006511.1
Basic Information
- Insect
- Salpingus planirostris
- Gene Symbol
- tfip11
- Assembly
- GCA_949788335.1
- Location
- OX460921.1:64704-79769[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-94 8.4e-91 304.3 10.5 2 275 405 676 404 676 0.98 2 2 0.34 1.2e+03 -1.2 0.0 242 269 688 715 680 724 0.58
Sequence Information
- Coding Sequence
- ATGTCAGAAGACGAAATGGAAAAGTTCGAAATATCGGATTACGATTTAAACAACGAGTTTTTCAGCCGACGACAAAAACTCACCAAGCACCAACAAATTTACGGAGTTTTCGCAGAGGACAGTGACGACGAAGATGACGATCGGAGCAAACGAGGCGGTTTCAAATCGAGAAATAAACCTCAGAACTACACCTCACCGATCGGTTTCATCGCTGGAGGTGTACAACAAGCCGGGAAAAAAGACGAGAATAAACCGCTCAAAAAGGATAGCAGAAGCGCATccgaggatgatgatgatcaagTCCCCATGACGTCGTTCAAGGTGGCGAACAGCTCGAGCGAGTCCGAACAGGACGAGACACCGAGAATGGGATTCGGGGCTCCCAAAGGTCGGACACAGGCCACGGTCACAGAAATCAATGCCGACATTGCCGGGATGAGGATCAAACGCAATTTGGCCGGGGAGAATTTGATGAACAGAGGCGTGGGACAGTGGGAGAAGCACACCAAAGGGATCGGGGCGAAACTGCTTCTCCAAATGGGCTTCCAGCCGGGCAGAGGTCTCGGCAAAGACCTTCAGGGCATTTCGGCACCCGTCGAGGCGCACCTGAGAAAAGGCAGAGGCGCCATCGGCGCTTATGGGCCAGAGAAGGCCGCGAGCATCAGCAAAACGCCCGGAATCGCTCTGGACGCTGTTACACACAAAGAGGGCGAGTCCAAGTGGAAGAAAAACGACAGCTCGAAGAAGAAGACTCGTTACTATTACAGGAGTGTGGATGACGTCATTGAGAAAGGGAAACGTCCAGGAGGATTATTTCGAGGTGCAGCTGGACCGACAAGTGAGTTGAGTAAAGTGAAGGTGATCGACATGACGGGTCCCCAGCAACGCGTTTTGAGCGGTTACCATGCTCTGAGCGGTCTGAAAGCGCCACCCGGTGTCGAACACTACGAGGACGTCGTGCACAAGAAGTGCTCCAATTTCGCCCTGCCCGAAATCCAGCACAACCTCGATCTGCTGGTCGACATGTGCGAACAGGACATCATCAGAATAGACCGAGACACCAGGTTCAATCAGGACCGGATCGTGGCCCTCGAACAGGAAGCCGATTCGCTGGGCGTCCAGGTGAAAACCGAGGATAAGCTCATAGGCGACCTCAAAACGGTCATGGAGATCGTGGAGCAACTGTTGGATCCGTCGCTGGGCCTGTCACTGCTACAGGTCGCCCGGATCTTCAACAATTTACAGGAGTGTCATTACGACGAATACGTGCGATACGAATTGGGCGAGCTGGCTCCCGGTCTGGTCGGGCCTCTGTTGACGTCCGCTTTGGCCAATTGGCAGGCTCTGGCCAATCCGGGCCAGTATGTCGACGTTTTCGGCCAATGGAAGGAGATCTTGATGGATGGGCCGAGGCGACGTGAGATTCTAGAAGATAATAATGTGGGAATACAGCCGTATGATAGTCTCTTATGGCACACTTGGATGCCTGTAATGAGAACGTGCGTTAGCGAGTGGAATCCGCGCGATTGCGATTCGCTGATCACCCTGATCGAGACGTGGAAACCGATTTTGCCACCGTGGATTCTGGACCACGTGTACGATCAGGTCGTGGTGCCCAGGATTCGTGCCGAAGTCGACCTGTGGAATCCGCTCACCGACACCGTGGCCATCCACCTGTGGATCCACCCCTGGATCCCGTTGCTCGACACCAGGCTGCAGGCGTCCGTCTATCCGACGATCCAAGAGAAACTGGGCTCCGCGCTGACCAATTGGCACCCGTCCGACTCGACCGCCAAACCAATGTTGAAACCGTGGCGACGTGTCCTGCCGGACGGAGTTTTCGTGGCGTTCCTGATCAAGCACATCGTGCCGAAATTGCAAATGTGCATGCAACAGCTTGTCATCAATCCACATCAGCAACATCTAGAGGCGTGGTATTGGGTGATGGACTGGAACGACATGTTATCGGTCGGTAACATGACGTTAATACTGGACAAGTTTTTCTTCCCTCGATGGCGGCAAACTTTGGCCATGTGGTTGAACCACAATCCGAACTACACCCAGGTCACAGAGTGGTACTCGGGTTGGAAGAGCATGCTCTCCGAGGAGCTGCTGGCTCAGCCCACAATCAAGGAGAACTTCCACAACGCGCTGGAAATTATGAGTCGGGCGGTGAGCATCGGCCAGCAGCCGGGCGCCAAAGAGTCCATTTCGTACCTGAGTTCGATGGAGAACAACGCACCGAGTGCGGCGCCGCCTCCGCGGGAATCGTTCGCGGAGGCGGTCAGAGCCGTTTCCAAGATACCGCCGCTTTATAAGGACTTGGTGGGCAAACGTTGTGAGGAGCGCGGTATCCTGTTTGTGCCCATTCCGAACAAGTATCACGAGGCCAAACAAGTTTACAGGATCGGAACCAACGGAGTCCAATGCTACATCGACAGGAATGTCGTGTTTTCGGCACAGAATGGCACGAACTGGACCCCAACGTCACTCAATAGATTACTAGATATCGCTTAA
- Protein Sequence
- MSEDEMEKFEISDYDLNNEFFSRRQKLTKHQQIYGVFAEDSDDEDDDRSKRGGFKSRNKPQNYTSPIGFIAGGVQQAGKKDENKPLKKDSRSASEDDDDQVPMTSFKVANSSSESEQDETPRMGFGAPKGRTQATVTEINADIAGMRIKRNLAGENLMNRGVGQWEKHTKGIGAKLLLQMGFQPGRGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKAASISKTPGIALDAVTHKEGESKWKKNDSSKKKTRYYYRSVDDVIEKGKRPGGLFRGAAGPTSELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHYEDVVHKKCSNFALPEIQHNLDLLVDMCEQDIIRIDRDTRFNQDRIVALEQEADSLGVQVKTEDKLIGDLKTVMEIVEQLLDPSLGLSLLQVARIFNNLQECHYDEYVRYELGELAPGLVGPLLTSALANWQALANPGQYVDVFGQWKEILMDGPRRREILEDNNVGIQPYDSLLWHTWMPVMRTCVSEWNPRDCDSLITLIETWKPILPPWILDHVYDQVVVPRIRAEVDLWNPLTDTVAIHLWIHPWIPLLDTRLQASVYPTIQEKLGSALTNWHPSDSTAKPMLKPWRRVLPDGVFVAFLIKHIVPKLQMCMQQLVINPHQQHLEAWYWVMDWNDMLSVGNMTLILDKFFFPRWRQTLAMWLNHNPNYTQVTEWYSGWKSMLSEELLAQPTIKENFHNALEIMSRAVSIGQQPGAKESISYLSSMENNAPSAAPPPRESFAEAVRAVSKIPPLYKDLVGKRCEERGILFVPIPNKYHEAKQVYRIGTNGVQCYIDRNVVFSAQNGTNWTPTSLNRLLDIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01311556;
- 90% Identity
- iTF_01311556;
- 80% Identity
- -