Rpad015348.1
Basic Information
- Insect
- Rhopalosiphum padi
- Gene Symbol
- arid3a
- Assembly
- None
- Location
- scf7180000007978.870103:386546-468522[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-26 5.3e-23 81.8 0.0 2 89 241 326 240 326 0.96
Sequence Information
- Coding Sequence
- ATGCTGAATAGTGAACCTTCGTCTGAGTTAGATAAACAACAGCGCAACGCGCAGACAGAACAAGTGAAGATGGCCGCCACTGAAGCCGGAAGCCCGAGACGACTGGGACTCAATCTCAATCTGTCCGTACAGCCACACGCGACCGCTTATCACTGGCCGCACTCGACAGTGGCCGAAGACACGTCGCCATCCCGGTCCAAGGGCTGCACGGACGAAGATGATGACGACGACGAAGACGATCGTGACATGGACGACCGCGATATGGACGACGATGAAATGATGATGGACTGTCGGCAGGACGAGGATTGTTCGCCCGAGGATGAACAAGACATTTTGGAAATGCAGCGCGAGGAACGCGAAACCCTCAATCAGCTCGCCAGGCAATTGGCATCTGGTTCGCGGCTCATAACCCCGATGCTCCAGCATCTAGTGTACCAACACCCAGGACTATCCGTACAACCGTCACCGATGCACCAACAGCAACTGCAACAGCAGCCGTCCTCCGTGGCCGTGTCATTGACAACGGCCGCGCTCAACAGACACGCGACGGCTGCCGCTGCTGACCTGTCGCCAAAGTCCAGTCACTCGGGTGACGTGCCAATGTCCGGCGGTCGTTCCACTGAAGTTCAGTCACCGTCCGCGGCTCGGAATAACGAGGCGCAGTCATGGACGTTCGAAGAACAGTTCCGACAGTTATATTCGGCGGGCAGCGAATCCGACAGACGGACCTTTCTAGACTCGCTGTTTAGTTTTATGCAAGAACAAGGAACTCCAATTAGTCGTTTACCCATTATGGCCAAGCGCGTGTTGGATCTGTACACCCTGTACAAGTTGGTTGTCCAGAGAGGAGGTATCGTTGCGGTCATCACCAAGAAATTGTGGCAGGAGATCATCAGAGGCCTGGGACTACCTCCTTCTATAACAAGTGCCGCGTTCACGTTACGCACACAATACGTAAAATATTTGTACGCGTACGAGTCACGAATGAACCAGTTCAGTACATTGGACGAGCTGAACATGGCGATAGCGGGCAACCGGCGCGAGGGCCGGCGGAACAAGTCGCTCATGTACTCGGACATGCCGCCTCCACCGCCCGGTCACCTGCACCATCATCACCACAGTCATCACCAGCAAGTGCACGGTGGCCACCCACACTCGATGATGGGCGGGGGCGCTCCATCGCAGGCGTCGCCGCAACAACAGCAGCAACAGCAGCAGCAGCAGCAACAGCCGCCTTCGTCCCATCACCATCACCACTACGCCAACGTGCTGGCCGCCGAAGATCGGTTCCGGCATCTCGCCGCCGCCATCATGGACAATCACCATCACGCGGCCGCCGCTGCAGCTGCCGCCGCGGCCGGCGTCAGTGTCGACCACCCCAGGCTGCGGATGCAATCGTGCAGTCCACCGCAACATCAGCAACAATTGCAATTGCAATCGGAATGCAAGACGTCCGCGGTCGCGTTGCACCAGACACCTCGGTCACCGGCCGCCGCCGGACTACCACCACCGCCACCAATGCCACCATCGTCGCTGTTCAACGGCCACCAGCCGCCGTCGTTCCAACACCTCCATCAGCAGCAACAACAACAAAATCAGTCCAACGCCACCCAGTCCAACAACGAGCAGACCAACAAACAGAGAGAACTACTCAGCATGCTCATGTGGATGGACATTGTCAGAGCGAATCAAACCGCAATCCCGAGACTACCCATTTCAAGTTTGCCATCCAGTCCGTCGGCTGCTGCAGCGGCGGCGGCGGCCGCGTACACGGCGGCCGCGGCGCTGAACCTCACTCCCGCGTACAATAAGGGACAGCAGATGGCCGTGGTCGTCGTGCCGGAACAGAGCGAAGCGCTGAACTTGGGCAAAAAGAGGACGTCGAACAACAACAACAGCGAGGACGAGGACGTGGACGGCGACCGCGCGGACGAGTACGGCGGCTGCAGGCGCGAATCCGTGTCGTCCGCGGCGAAGCGCATCAAAACGGAACTGTCTTCGCCGCCGGTCAGCGGCTGTTCCAGCGACGACGAAAAGGCTGCGGCCAAGGCGACGAGCAACGGTAGCCCGTCGCCGCCGCAACCGTCGGCCGCCGACGACGTCGCGTACCGATCCGACACGAGACGCGGTTCGTCGCCGATCGACGAGGACGTGGTCGAGATGGACATCAACACGTCGCCTTCGGCTGGTTCGTCGGCTAACAACGGCTTGGCGATATCCGTGACGCGCAGAACGAAAAACGGCGTGTACATGGGTCAACTCACCAAGAACAACGCATTGATCAACGGAGGATTGAACAACAACGCAAATCCATTCGTTTTGCACCTAAACGGAGATCTATACACTGGGCAGTTGCAGTTGCAACAGCAGCAGATGGCCAACAACTGA
- Protein Sequence
- MLNSEPSSELDKQQRNAQTEQVKMAATEAGSPRRLGLNLNLSVQPHATAYHWPHSTVAEDTSPSRSKGCTDEDDDDDEDDRDMDDRDMDDDEMMMDCRQDEDCSPEDEQDILEMQREERETLNQLARQLASGSRLITPMLQHLVYQHPGLSVQPSPMHQQQLQQQPSSVAVSLTTAALNRHATAAAADLSPKSSHSGDVPMSGGRSTEVQSPSAARNNEAQSWTFEEQFRQLYSAGSESDRRTFLDSLFSFMQEQGTPISRLPIMAKRVLDLYTLYKLVVQRGGIVAVITKKLWQEIIRGLGLPPSITSAAFTLRTQYVKYLYAYESRMNQFSTLDELNMAIAGNRREGRRNKSLMYSDMPPPPPGHLHHHHHSHHQQVHGGHPHSMMGGGAPSQASPQQQQQQQQQQQQPPSSHHHHHYANVLAAEDRFRHLAAAIMDNHHHAAAAAAAAAAGVSVDHPRLRMQSCSPPQHQQQLQLQSECKTSAVALHQTPRSPAAAGLPPPPPMPPSSLFNGHQPPSFQHLHQQQQQQNQSNATQSNNEQTNKQRELLSMLMWMDIVRANQTAIPRLPISSLPSSPSAAAAAAAAAYTAAAALNLTPAYNKGQQMAVVVVPEQSEALNLGKKRTSNNNNSEDEDVDGDRADEYGGCRRESVSSAAKRIKTELSSPPVSGCSSDDEKAAAKATSNGSPSPPQPSAADDVAYRSDTRRGSSPIDEDVVEMDINTSPSAGSSANNGLAISVTRRTKNGVYMGQLTKNNALINGGLNNNANPFVLHLNGDLYTGQLQLQQQQMANN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00463138;
- 90% Identity
- iTF_00972833; iTF_00463138; iTF_01328393; iTF_01032661; iTF_01303964; iTF_00135092;
- 80% Identity
- -