Msac008949.1
Basic Information
- Insect
- Melanaphis sacchari
- Gene Symbol
- Ci-DRIL1/2
- Assembly
- GCA_002803265.2
- Location
- NW:1986323-2074521[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-26 2.5e-23 81.7 0.0 2 89 244 329 243 329 0.96 2 2 3.4 4.9e+03 -2.6 0.4 67 86 418 438 408 439 0.62
Sequence Information
- Coding Sequence
- ATGCTGAATAGTGAACCGTCGCCTGAGCTAGACAAACAACAGCGCAACGCTCAGACAGAACAAGTGAAGATGGCCGCCACCGAAGCCGGAAGCCCCAGACGGCTGGGACTCAATCTCAACCTGAGCGTACAGCCGCACGCGGCCGCATTTCACTGGCCCCACTCCACAGTGGCCGAAGACACGTCACCATCCCGGTCTAAGGGCTGCacggacgacgacgacgacgacgacgacgaagacGATCGCGACATGGACGACCGTGACATGGACGACGACGACATCATGATGGACTGTCGGCAGGACGAGGATTGTTCGCCCGAGGACGAACAAGACATACTGGAAATGCAGCGCGAGGAACGCGAAACCCTCAATCAGCTTGCCAGACAATTGGCTTCCGGTTCGCGACTGATAACTCCCATGCTCCAACATCTCGTGTACCAACATCCGGGGCTATCCGTACAACCGTCGCCGATGCACCAGCAGCAACTGCAACAGCAGCCGTCCTCCGTGGCCGTGTCGTTGACGACGGCCGCGCTCAGCAGACacgcggcggcggtggcagcGGCCGCTGACCTGTCGCCAAAGTCCAGCCACTCGGGCGACGTGCCAATGTCCGGCGGTCGTTCTACCGACGTGCAGTCGCCGTCCGCGGCCCGGAACAACGAGGCGCAGTCGTGGACGTTCGAAGAGCAGTTCCGACAGtTATACTCGGCGGGCAGTGAATCAGACAGACGGACCTTTCTAGACTCGCTATTCAGTTTCATGCAAGAACAAGGAACCCCAATTAGCCGTCTACCCATCATGGCCAAACGCGTGTTGGATCTGTACACTCTATACAAGTTGGTTGTCCAGAGAGGTGGTATCGTTGCGGTCATCACCAAGAAATTGTGGCAAGAGATCATCCGAGGTCTGGGACTACCTCCTTCAATAACGAGTGCTGCGTTCACATTACGTACACAAtacgttaaatatttgtacgcGTACGAGTCACGAATGAACCAGTTCAGTACGTTGGACGAGCTGAACATGGCCATAGCGGGCAACCGGCGCGAGGGCCGGCGGAACAAGTCGCTCATGTACTCGGACatgccgccgccaccgcccgGCCACATGCACCACCATCACcacggtggcggcggcggcggccatCACCAGCAAGTGCACGGTGGTGGCCACCCGCATCCAATGATGGGCGGGGGCGCTCCGTCGCAGCAGCCGTCGCcgcagcagcaacagcaacagcaccagcagcagcagcagcaccaGCCGCCGTCGTCGCATCACCATCACCACCACTACAATAACGTGTTGGCCGCCGAGGACCGTTTCCGGCACCTGGCCGCCGCCATCATCGACAACCACCATCACGCGGCCGCCGCTGCAGCAGCCGCCGCCGCGGCCGGCGTCAGCGTCGACCACCCCAGGCTGCGGATGCAGTCGTGCAGCCCGCCGCAGCATCAGCAACAGTTGCAACTGCAACCGGAATGCAAGGCGTCCGCGGTCGCGTTGCACCAGACTACGCCCCGGTCGCCGGCCACCGCCGGattgccgccgccgccacccaTGCCGCCGTCGTCTCTGTTCAACGGCCACCAGCCGCCGTCGTTCCAACACCTCCaccaacagcagcagcagcaccagcagcagcagcagcagcagcagcaacaacaacaacaacagtcCAACGCCGCCCAGTCCAACAACGAGCAGACCAACAAACAGAGAGAGCTCCTCAACATGCTCATGTGGATGGACATTGTCAGAGCGAATCAAACCGCAATGCCGAGACTACCCATTTCAAGTTTGCCATCCAGTCCGTCGGCtgctgcggcggcggcggcggcggcggccgcTTACACGGCGGCCGCGGCGCTGAACCTCGCTCCCGCGTACAACAAGGGACAGCAGATGGCCGTGGTCGTCGTGCCGGAACAGAGCGAGGCGCTGAACTTGGGCAAGAAGAGGACGTcgaacaacaacaacagcgaGGACGAAGACGCGGACGGCGACCGGCCGGACGGGCGTGACGGCCGGCGCGAGTCGGTGTCGTCGGCGGCCAAGCGCATCAAGACGGAACGGTCGTCGCCGCCCGTCAGCGGTTGTTCCAGCGACGACGAGAAGCCGTCCGCTGCGGCCAAGGCGACGGCGACCAGCGACGGCAGCCCGTCGTCGCCGCAACCGTCGCCGGCCGCCGAGGACGTCGCGTACCGACCCGACACGAGACGCGGCTCGTCGCCCGTCGACGAGGACGTGGTCGAAATGGATATCAACACGTCGCTTTCGGCTGGCTCGTCTGGTAACAACGGTTTGGCGATTTCTGTTACGCGAAGAACGAAAAATGGCGTGTACATGGGTCAACTCACCAAGAACAACGCATTGATCAACGGAGGATTGAACAACAACGAAAATCCGTTCGTACTGCACCTGAACGGAGATCTGTACACCGGACAGTTGCAGTTGCAACAGCAGCAGGTGGCCAACAACTGA
- Protein Sequence
- MLNSEPSPELDKQQRNAQTEQVKMAATEAGSPRRLGLNLNLSVQPHAAAFHWPHSTVAEDTSPSRSKGCTDDDDDDDDEDDRDMDDRDMDDDDIMMDCRQDEDCSPEDEQDILEMQREERETLNQLARQLASGSRLITPMLQHLVYQHPGLSVQPSPMHQQQLQQQPSSVAVSLTTAALSRHAAAVAAAADLSPKSSHSGDVPMSGGRSTDVQSPSAARNNEAQSWTFEEQFRQLYSAGSESDRRTFLDSLFSFMQEQGTPISRLPIMAKRVLDLYTLYKLVVQRGGIVAVITKKLWQEIIRGLGLPPSITSAAFTLRTQYVKYLYAYESRMNQFSTLDELNMAIAGNRREGRRNKSLMYSDMPPPPPGHMHHHHHGGGGGGHHQQVHGGGHPHPMMGGGAPSQQPSPQQQQQQHQQQQQHQPPSSHHHHHHYNNVLAAEDRFRHLAAAIIDNHHHAAAAAAAAAAAGVSVDHPRLRMQSCSPPQHQQQLQLQPECKASAVALHQTTPRSPATAGLPPPPPMPPSSLFNGHQPPSFQHLHQQQQQHQQQQQQQQQQQQQQSNAAQSNNEQTNKQRELLNMLMWMDIVRANQTAMPRLPISSLPSSPSAAAAAAAAAAAYTAAAALNLAPAYNKGQQMAVVVVPEQSEALNLGKKRTSNNNNSEDEDADGDRPDGRDGRRESVSSAAKRIKTERSSPPVSGCSSDDEKPSAAAKATATSDGSPSSPQPSPAAEDVAYRPDTRRGSSPVDEDVVEMDINTSLSAGSSGNNGLAISVTRRTKNGVYMGQLTKNNALINGGLNNNENPFVLHLNGDLYTGQLQLQQQQVANN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00463138;
- 90% Identity
- iTF_01305325;
- 80% Identity
- -