Sgrm016241.1
Basic Information
- Insect
- Schizaphis graminum
- Gene Symbol
- Ci-DRIL1/2
- Assembly
- GCA_003264975.1
- Location
- QEWZ01001386.1:5618015-5701043[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-26 6.8e-23 81.4 0.0 2 89 241 326 240 326 0.96 2 2 3.9 1.3e+04 -2.8 0.4 69 86 409 428 394 429 0.60
Sequence Information
- Coding Sequence
- ATGCTGAATAGTGAACCTTCGTCTGAGTTAGATAAACAACAGCGCAACGCGCAGACAGAACAAGTGAAGATGGCCGCAACTGAAGCCGGAAGCCCGAGACGACTGGGACTCAATCTCAACCTGAGCGTACAGCCACACGCGGCCGCTTATCACTGGCCGCACTCGACAGTGGCCGAAGACACGTCACCATCCCGGTCCAAGGGCTGCACGGACGAagatgatgacgacgacgaagacgatCGTGACATGGACGACCGCGATATGGACGACGATGAAATGATGATGGACTGTCGGCAGGACGAGGATTGTTCGCCCGAGGACGAACAGGACATTTTGGAAATGCAGcgcGAGGAACGCGAAACCCTCAATCAGCTCGCCAGACAATTGGCATCCGGTTCGCGGCTGATCACCCCAATGCTCCAGCATCTAGTGTACCAACACCCAGGACTATCCGTACAACCGTCACCGATGCACCAACAACAACTGCAACAGCAGCCGTCCTCTGTGGCCGTGTCATTGACAACGGCCGCGCTCAACAGACACGCGACGGCAGCCGCTGCTGACCTGTCGCCAAAGTCCAGTCACTCGGGCGACGTGCCAATGTCCGGCGGTCGTTCCACCGAAGTTCAGTCACCGTCCGCGGCTCGGAATAACGAGGCGCAGTCATGGACGTTCGAAGAACAGTTCCGACAGttATACTCGGCGGGCAGCGAATCCGACAGACGGACATTTCTAGACTCGCTGTTTAGTTTTATGCAAGAACAAGgaacTCCGATTAGTCGTTTACCTATCATGGCCAAACGCGTGTTAGATCTGTACTCCCTGTACAAGTTGGTTGTCCAGAGAGGAGGTATAGTTGCGGTCATCACCAAGAAATTGTGGCAAGAGATCATCCGAGGCCTGGGACTACCTCCTTCTATAACGAGTGCCGCGTTCACGTTACGCACACAaTACGTAAAATATTTGTACGCGTACGAGTCACGGATGAACCAGTTCAGTACATTGGATGAGCTGAATATGGCGATAGCGGGCAACCGGCGCGAGGGCCGGCGGAACAAGTCGCTCATGTACTCGGACATGCCACCTCCACCGCCCGGTCACCTACACCATCATCACCACGGTCATCACCAGCAAGTGCACGGCGGCCACCCACACTCGATGATGGGCGGAGGCGCTCCATCGCAGGCGTCGCcgcaacaacagcaacagcagcagcagcagcagcagcaacagcaacagccgCCTTCGTCCCATCACCATCAACACTACGCCAACGTGCTGGCCGCCGAAGATCGGTTCCGGCATCTCGCCGCCGCCTTCATGGACAATCACCATCACGTGGCCGCCGCTGCAGCTGCCGCCGCGGCCGGCGTCAGTGTCGACCACCCCAGGCTGCGGATGCAATCGTGCAGTCCGCCGCAACACCAGCAACAATTGCAATTGCAATCGGAATGCAAGACGTCCGCGGTCGCGATGCACCAGGCACCTAGGTCACCGGCCGCCGCTGGACTGCCACCACCGCCACCAATGCCACCATCGTCGCTGTTCAATGGCCACCAGCCGCCGTCGTTCCAACACCTCCatcaacagcagcaacaacaaaaTCAGTCCAACGCCGCCACCCAGTCCGCCAACGAGCAGACCAACAAACAGAGAGAATTACTCAGCATGCTAATGTGGATGGACATTGTCAGAGCGAATCAAACGGCAATACCGAGACTACCCATTTCAAGTTTGCCATCCAGTCCGTCGGCTGCTGCGGCGGCAGCGGCTGCGGCGTACACGGCGGCCGCGGCGCTGAACCTCACTCCCGCGTACAACAAGGGACAGCAGATGGCCGTGGTCGTCGTGCCGGAACAGAGCGAAGCGCTGAACTTGGGCAAAAAGAGGACGtcgaacaacaacaacagcgaGGACGAGGACGTGGACGGCGACCGCGCGGAGGACGAGTACGGCGGCTGCGGGCGCGGATCCGTGTCGTCCGCGGCGAAGCGCATCAAAACGGAACGGTCTTCGCCGCCGGTCAGCGGTTGTTCCAGCGACGACGAAAAGGCTGCGGCCAAGGCGACGAGCAACGGTAGCCCGTCGCCGCCGCAACCGTCGGCCGCCGACGACGTCGCGTACCGATCCGACACGAGGCGCGGTTCGCCGCCGGTCGACGAGGACGTGGTCGAGATGGACATCAACACGTCGCCTTCGGCAGGTTCGTCGGCTAACAATGGCTTGGCGATATCCGTGACGCGCAGAACGAAAAACGGCGTGTACATGGGTCAACTCACCAAGAACAACGCATTGATCAACGGAGGATTGAACAACAACGCAAATCCATTCGTTTTGCACCTAAACGGAGATCTATACACTGGGCAGTTGCAGTTGCAACAGCAGCAGATGGCCAACAACTGA
- Protein Sequence
- MLNSEPSSELDKQQRNAQTEQVKMAATEAGSPRRLGLNLNLSVQPHAAAYHWPHSTVAEDTSPSRSKGCTDEDDDDDEDDRDMDDRDMDDDEMMMDCRQDEDCSPEDEQDILEMQREERETLNQLARQLASGSRLITPMLQHLVYQHPGLSVQPSPMHQQQLQQQPSSVAVSLTTAALNRHATAAAADLSPKSSHSGDVPMSGGRSTEVQSPSAARNNEAQSWTFEEQFRQLYSAGSESDRRTFLDSLFSFMQEQGTPISRLPIMAKRVLDLYSLYKLVVQRGGIVAVITKKLWQEIIRGLGLPPSITSAAFTLRTQYVKYLYAYESRMNQFSTLDELNMAIAGNRREGRRNKSLMYSDMPPPPPGHLHHHHHGHHQQVHGGHPHSMMGGGAPSQASPQQQQQQQQQQQQQQQPPSSHHHQHYANVLAAEDRFRHLAAAFMDNHHHVAAAAAAAAAGVSVDHPRLRMQSCSPPQHQQQLQLQSECKTSAVAMHQAPRSPAAAGLPPPPPMPPSSLFNGHQPPSFQHLHQQQQQQNQSNAATQSANEQTNKQRELLSMLMWMDIVRANQTAIPRLPISSLPSSPSAAAAAAAAAYTAAAALNLTPAYNKGQQMAVVVVPEQSEALNLGKKRTSNNNNSEDEDVDGDRAEDEYGGCGRGSVSSAAKRIKTERSSPPVSGCSSDDEKAAAKATSNGSPSPPQPSAADDVAYRSDTRRGSPPVDEDVVEMDINTSPSAGSSANNGLAISVTRRTKNGVYMGQLTKNNALINGGLNNNANPFVLHLNGDLYTGQLQLQQQQMANN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00463138;
- 90% Identity
- iTF_01305325;
- 80% Identity
- -