Rmai007081.1
Basic Information
- Insect
- Rhopalosiphum maidis
- Gene Symbol
- CSRNP3_1
- Assembly
- GCA_003676215.3
- Location
- NC:17640409-17650072[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.5e-98 1e-93 312.7 5.4 1 218 357 564 357 564 0.92
Sequence Information
- Coding Sequence
- atggaatttttaataacaaatgaaTCTGATGAAGTGTCTATATTATCACAAACTGATGAACCTACCAACACCTTACCTCATAATGATCAAATTAAGGATATAAATGTTGCAAAcattaataaagataataaagaaatatctACTGAATCAAAAACTTTATCTGACTGTCTAGTAGATGTCTCAAAATCATTATCAGATTCAGAATGTAGAgttcaaaatatgttatttgataTGAAATCTGAAGAATTGAGTACAAGTTCTGATGAAAAAACCAACATAGATTGCAATATAAAACCTTACAatagtgatataaaaaatgaatgtatgTTTATGCCCTCATCAAATTCAACTTATATCTCCTCTAATGAAACTCAAGTTCTTTCAAGTACAAATGAATCAATATATTcagatgtaaataatatttttactactaaTAAAAAACGAGGATTTTCAATTGAAGAAATCAGTAAAGACGAAACTTCTCAAAATAGCCAAAGCATGTCAACATATTCAAATGATTATACTTGCTTTTTAAGCGAGCAAACAGATGCTACAAGCAATTTAACACCTTTCAAAAGAAGTAATAGCTATTATTTTGATTCTCCTGTAAAaaagttatgtattaataaactacCTATTGATGATAAAACAAATGAAGTGCTTGATAGCATTAACctgtattcaaataaaatattcagtgGATTTACTAGCATTCAGAATGACTTAGAAGTGGATTGTATACAAGATCGTTATGATGGAAGTGACTCTGGATTTGGATCAGAATTAGCAGAAGATAAGAACACTGGCAGCTTAGATGTAGCAGTTTCGACAtcaaatatatcatacaaaacTGATTTTACATTAAACCAAGAATCTAGTTTTGAAGATTTACAAAGAACTTCAAATGAATTTTTGTCAGCAATGGAAGTGTTAAAGCCAAAATTCTCTGACTCTATTCTAGATACAGCACCATTAGAcgttagaaataattatggaAATGTTAAAGGCATTTTAAAACGCAACAAACCTGTCAATTATGGTGTTCTAACATCTGATGTTACAACGGTGAAGAAacgcaaaaatataaattttgcaaATGTAACAGTCTTTTATTTTCCTCGAGTTCAAGGATTTACATGCGTTCCATCTcagggtGGTTCTACTCTTGGCATGACAAGAGTTCATAGCGCTTCACGAGTTTTTTCTCTACCTGAATATATAGCAGAACAGAGAAGAATACGTCGAAACTTAATTCAAATCAGTCAATCCGAGGTTTCTGGTACAAATAGTGATGACAGTGATAGCGATGTAGGAGCAGCAGATGTTTACTCTGAGTCTGATGCTGATGTAGATTCAGATAGCAATGGAAGTTTTTTACaaccTGTACCTACACGACAAAGACGTGCTTTATTGAAGGCAGCTGGTGTTGACAAAATTGATTCATCTGAAAAAGATGACTGCAAGAGCATAAGACTATCCAGGGAATTTTGCGGGTGTTTATGCCGTGGTTTTTGTGACCCAGATACATGCGCATGTTTTCAAGCAGGCATAACATGTCAAGTTGACAGAATGAATTTCCCATGTGGATGCACAGTAGATGGCTGTGGAAATTCTGTTGGTCGTATAGAATTCAATCCAACAAGAGTTAGAAAACATTTCATTCACACCATAATGAGACTTGAAATCAAAAAGAGAGAAGCACAAGAAGAGGAGCACTGTAATAAGTTAGCTATGACATCACCACTTATATCCAATTTTTCCTATCACGATTCCAGACACATACAACCGTATTATCAACCACAGCACTACGaacacaatttaaatgattataactaTCAATCGTTTTTGCCTGTTTATGATAGTAATAACCATATTGCCCCAGAAAGTAGTACACAGAACGATTATCAGCTTAATAATTcgcataatttatatgaaccATACCAGCCATTCCCATCTGCGTTTGTGCCTTTGTCACCAGATAGACCAAGAGGATTGTCTATTATAGACAATAAACCTGAAACGTTCGCAGATTTATTGCAACCATACAGTTTACCGAGTATTGAAAGTACTGATTCGCTTGGTATTCCAAATATTCCAAGTACATTAGTTTCggataatttcaatttagaaACTGAAAATTTAGgggaaatcattaaaaatacaatggtTGAAAGTGTCAATTCTTAA
- Protein Sequence
- MEFLITNESDEVSILSQTDEPTNTLPHNDQIKDINVANINKDNKEISTESKTLSDCLVDVSKSLSDSECRVQNMLFDMKSEELSTSSDEKTNIDCNIKPYNSDIKNECMFMPSSNSTYISSNETQVLSSTNESIYSDVNNIFTTNKKRGFSIEEISKDETSQNSQSMSTYSNDYTCFLSEQTDATSNLTPFKRSNSYYFDSPVKKLCINKLPIDDKTNEVLDSINLYSNKIFSGFTSIQNDLEVDCIQDRYDGSDSGFGSELAEDKNTGSLDVAVSTSNISYKTDFTLNQESSFEDLQRTSNEFLSAMEVLKPKFSDSILDTAPLDVRNNYGNVKGILKRNKPVNYGVLTSDVTTVKKRKNINFANVTVFYFPRVQGFTCVPSQGGSTLGMTRVHSASRVFSLPEYIAEQRRIRRNLIQISQSEVSGTNSDDSDSDVGAADVYSESDADVDSDSNGSFLQPVPTRQRRALLKAAGVDKIDSSEKDDCKSIRLSREFCGCLCRGFCDPDTCACFQAGITCQVDRMNFPCGCTVDGCGNSVGRIEFNPTRVRKHFIHTIMRLEIKKREAQEEEHCNKLAMTSPLISNFSYHDSRHIQPYYQPQHYEHNLNDYNYQSFLPVYDSNNHIAPESSTQNDYQLNNSHNLYEPYQPFPSAFVPLSPDRPRGLSIIDNKPETFADLLQPYSLPSIESTDSLGIPNIPSTLVSDNFNLETENLGEIIKNTMVESVNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01031965;
- 90% Identity
- iTF_01305545; iTF_01304852; iTF_01328628; iTF_00973039; iTF_00134264; iTF_00135317; iTF_00136123;
- 80% Identity
- -