Msac000232.1
Basic Information
- Insect
- Melanaphis sacchari
- Gene Symbol
- CSRNP3
- Assembly
- GCA_002803265.2
- Location
- NW:765199-799835[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.55 6.4e+03 -3.8 0.4 81 107 138 164 119 180 0.52 2 2 5.7e-98 6.6e-94 313.3 5.4 1 218 360 567 360 567 0.92
Sequence Information
- Coding Sequence
- ATGGAATTTTTAATAGCAAATGAATCTGACGAAATCTCAATATTGCCGCAAACTGATGAGCCTACCAACGACAAACCttataatgatgatattaaGCAAACAAATGTTGCAAATAttgataaagttaataatgaaGAAATATGTACTGTATCAAAAACTTTATCTGATTGTTTAGTAGACActccaaaattattatcaaattcagAATGTAGAGTTGAAAACAtgctattcaatattaaatctgAAGAATTTACTGCAAATTCTGATGACAAAACCAGCATAGATTGcaatattaaatcttttaatggTGATatgaagaatttatttataccctCATCAAATTCAACTTATATCTCCTCTAATGAAAATCAAGTTCTTTCAAATACAAATGAATCAACTTAttcagatataaataatatttttactactaaTAAAAAACGAGGGTTTTCAATTGAAGAAATCAGTAAAGATGAAACTTCTCAAAATAGCCAAAGCATGTCAACATATTCAAATGATTATACTTGCTTTTTAAGCGAGCAAACAGATGCTACAAGCAATTTAACGCCTTTCAAAAGAAGTAATAGCTATTATTTTGACTCTCCTGTAAAAAAGTTATGTATTACTAAACTACCTATTGatgataaaacaaatgaaGTGCTTGATAGCATTGAcctgtattcaaataaaaaagatgataaaatattcaatggaTTTACTAGTATTCAAAATGACTTAGAAGTAGATTGTATACAAGATCGTTATGATGGAAGCGACTCTGGATTTGGATCAGAATTAGCAGAAGATAAAAACACTGGCAGCTTAGATGTAGCAGTCTCGTCatcaaatatatcatacaaaacTGATTTTACATCAAACCAAGAATCTAGTTTTGAAGATTTACAAAGAACTTCAAATGAATTTTTGTCGGCAATGGAAGTGTTGAAGCCTAAATTTTCTGATTCTATTCTAGATTCAGGACCATTAGATGTTAGAAGTAATTATGGAATTGTTAAAGGCATTTTAAAACGCAACAAACCAGTCAACTATGGTGTTCTAACATCTGATGTTACAACAGTGAAGAAacgcaaaaatataaattttgcaaATGTAACTGTCTTTTATTTTCCTCGAGTTCAAGGATTTACATGCGTTCCATCtcagggTGGTTCTACTCTTGGCATGACAAGAGTTCACAGCGCATCAAGAGTTTTTTCTCTTCCTGAATATATAGCAGAACAAAGAAGAATACGTCGAAACTTAATTCAACTAAGTCAATCCGAGGTTTCTGGTACAAATAGTGAGGACAGTGATAGTGATGTAGGAGCAGCAGATGTTTACTCTGAATCTGATGCTGATGTTGATTCAGATAGCAATGGAAGTTTTTTACAAcctGTACCTACACGACAAAGACGTGCTCTATTGAAGGCAGCTGGTGTTGACAAAATTGATTCTTCAGAAAAGGATGATTGCAAGAGCATAAGACTATCGAGGGAATTTTGCGGATGTTTATGTCGTGGTTTTTGTGACCCAGATACATGTGCTTGTTTTCAAGCAGGCATAACATGTCAAGTTGACAGAATGAATTTTCCGTGTGGATGTACAGTAGATGGCTGTGGAAATTCTGTTGGTCGCATAGAATTCAATCCAACAAGAGTTCGAAAACATTTCATTCACACTATAATGAgacttgaaataaaaaagagaGAAGCACAAGAAGAGGAGCACTGTAATAAGCTAGCTATGACATCACCACTTATATCCAATTTTTCCTATCATGATTCCAGACACATACAACCGTATTATCAACCACAGCACTATGaacacaatttaaatgattataattatcattcgtTTTTACCTGTTTATGATGGTAATCACGTTACTCCAGAAACTAGTACACAGAACAATTATCAGCTAAATAATTCGCACAATTTATATGAACCGTATCAGCCATTTCCATCTGCGTTTGTGCCTTTATCACAAGATAGATCTAGAGGATTGTCTATTTTAGACAATAAACCTGAAACATTCACGGATTTATTGCAACCATATAGTTTACAGAGTATGGAAAGTACTGATTCACTCGGTATTCCAAATATTCCAAATACATTAGTGTctgatagttttaatttagaaactgaaaatttaggagaaattattaaaaatacaatggtTGAAAgtgtaaattcttaa
- Protein Sequence
- MEFLIANESDEISILPQTDEPTNDKPYNDDIKQTNVANIDKVNNEEICTVSKTLSDCLVDTPKLLSNSECRVENMLFNIKSEEFTANSDDKTSIDCNIKSFNGDMKNLFIPSSNSTYISSNENQVLSNTNESTYSDINNIFTTNKKRGFSIEEISKDETSQNSQSMSTYSNDYTCFLSEQTDATSNLTPFKRSNSYYFDSPVKKLCITKLPIDDKTNEVLDSIDLYSNKKDDKIFNGFTSIQNDLEVDCIQDRYDGSDSGFGSELAEDKNTGSLDVAVSSSNISYKTDFTSNQESSFEDLQRTSNEFLSAMEVLKPKFSDSILDSGPLDVRSNYGIVKGILKRNKPVNYGVLTSDVTTVKKRKNINFANVTVFYFPRVQGFTCVPSQGGSTLGMTRVHSASRVFSLPEYIAEQRRIRRNLIQLSQSEVSGTNSEDSDSDVGAADVYSESDADVDSDSNGSFLQPVPTRQRRALLKAAGVDKIDSSEKDDCKSIRLSREFCGCLCRGFCDPDTCACFQAGITCQVDRMNFPCGCTVDGCGNSVGRIEFNPTRVRKHFIHTIMRLEIKKREAQEEEHCNKLAMTSPLISNFSYHDSRHIQPYYQPQHYEHNLNDYNYHSFLPVYDGNHVTPETSTQNNYQLNNSHNLYEPYQPFPSAFVPLSQDRSRGLSILDNKPETFTDLLQPYSLQSMESTDSLGIPNIPNTLVSDSFNLETENLGEIIKNTMVESVNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01031965;
- 90% Identity
- iTF_01304176;
- 80% Identity
- -