Rpad016222.1
Basic Information
- Insect
- Rhopalosiphum padi
- Gene Symbol
- CSRNP3
- Assembly
- None
- Location
- scf7180000008479.271860:82300-89757[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-45 6.3e-41 141.2 0.0 1 140 422 551 422 553 0.87 2 2 1.9e-32 5.1e-28 99.0 4.2 162 218 552 608 550 608 0.96
Sequence Information
- Coding Sequence
- ATGTGTGCGTGTGCGTACGTACGTGCGTGCGTTTGCGTGTGTGCGTTGGCCCCGGCGACAATTATTATTATTATTATTCGTACCGCCGCCGCCGCCGCCGCCACTACAGCCGCCGAGATTATCAGCCGTCGTCGTGGTGTGCGAGAATCCGTTTCGCCAGCGTTCAGGTATTTAACTATAGCGATGGAATTTTTAATAACAAATGAATCTGATGAAGTGTCTATATTATCACAAACTGATGAACCCACCAACACCTTACCTCATAATGATGAAATTAAGGATATAATTGTTGCAAACATTAATAAAGATAATAAAGAAATATCTACTGAATCAAAAACTTTATCTGACTGTCTAGTAGATGCCTCAAAATCATTATCAGATTCAGAATGTAGAGTTCAAAATATGTTATTTGATATGAAATCTGAAGAATTGAGTACAAGTTCTGATGAAAAAACCAGCATAGATTGCAATATAAAACCTTACAATAGTGATATAAAAAATGTATGTATGTTTATGCCCTCATCAAATTCAACTTATATCTCCTCTAATGAAACTCAAGTTCTTTCAAGTACAAATGAATCAATTTATTCAGATATAAATAATATTTTTACTACTAATAAAAAACGAGGATTTTCAATTGAAGAAATCAGTAAAGATGAAACTTCTCAAAATAGCCAAAGCATGTCAACATATTCAAATGATTATACCTGCTTTTTAAGCGAGCAAACAGATGCTACAAGCAATTTAACACCTTTCAAACGAAGTAATAGCTATTATTTTGATTCTCCTGTAAAAAAGTTATGTATTAATAAACTACCTATTGATGATAAAACAAATGAAGCGCTTGATAGCATTAACCTGTATTCAAATAAAAATGAAAATAAAATATTCAGTGGATTTACTAGCATTCAGAATGACTTAGAAGTGGATTGTATACAAGATCGTTATGATGGAAGTGACTCTGGATTTGGATCAGAATTAGCAGAAGATAAGAACACTAGCAGCTTAGATGTAGCAGTTTCGACATCAAATATATCATACAAAACTGATTTTACATTAAACCAAGAATCTAGTTTTGAAGATTTACAAAGAACTTCAAATGAATTTTTGTCAGCAATGGAAGTGTTGAAGCCAAAATTCTCTGACTCTATTCTAGATACAGCACCATTAGACATTAGAAATAATTATGGAAATGTTAAAGGCATTTTAAAACGCAATAAACCTGTCAATTATGGTGTTCTAACATCTGATGTTACAACGGTGAAGAAACGAAAAAATATAAATTTTGCAAATGTAACAGTCTTTTATTTTCCTCGAGTTCAAGGATTTACATGCGTTCCATCTCAGGGTGGTTCTACTCTTGGCATGACAAGAGTTCATAGCGCTTCACGAGTTTTTTCTTTACCTGAATATATAGCAGAACAGAGAAGAATACGTCGAAACTTAATTCAAATAAGTCAATCCGAGGTTTCTGGTACAAATAGTGATGACAGTGATAGCGATGTAGGAGCAGCAGATGTTTATTCTGAATCTGACGCTGATGTAGACTCAGATAGCAATGGAAGTTTTTTACAACCTGTACCTACACGACAAAGACGTGCTCTATTGAAGGCAGCTGGTGTTGAAAAAATTGATTCATCTGAAAAGGATGACTATACATGCGCATGTTTTCAAGCAGGCATAACATGTCAAGTTGACAGAATGAATTTCCCATGTGGATGCACAGTAGATGGCTGTGGAAATTCTGTTGGTCGTATAGAATTCAATCCAACAAGAGTTCGAAAACATTTCATTCACACCATAATGAGACTTGAAATCAAAAAGAGAGAAGCACAAGAAGAAGAGCACTGTAATAAGTTAGCTATGACATCACCACTTATATCCAATTTTTCCTATCATGATTCCAGACACATACAACCGTATTATCAACCACAGCACTACGAACACAATTTAAATGATTATAATTATCAATCATTTTTGCCTGTTTATGATAGTAATAACCACATTGCCCCAGAAAGTAGTACACAGAACGATTATCAGCTTAATAATTCGCATAATTTATATGAACCATACCAGCCATTCTCATCTGCGTTTGTGCCTTTGTCACCAGATAGACCTAGAGGATTGTCTATTATAGACAATAAACCTGAAACGTTCACAGATTTATTGCAACCATACAGTTTACCGAGTATTGAAAGTACTGATTCGCTTGGTATTCCAAATATTCCAAGTACATTAGTTTCGGATAGTTTCAATTTAGAAACTGAAAATTTAGGGGAAATCATTAAAAATACAATGGTTGAAAGTGTCAATTCTTAA
- Protein Sequence
- MCACAYVRACVCVCALAPATIIIIIIRTAAAAAATTAAEIISRRRGVRESVSPAFRYLTIAMEFLITNESDEVSILSQTDEPTNTLPHNDEIKDIIVANINKDNKEISTESKTLSDCLVDASKSLSDSECRVQNMLFDMKSEELSTSSDEKTSIDCNIKPYNSDIKNVCMFMPSSNSTYISSNETQVLSSTNESIYSDINNIFTTNKKRGFSIEEISKDETSQNSQSMSTYSNDYTCFLSEQTDATSNLTPFKRSNSYYFDSPVKKLCINKLPIDDKTNEALDSINLYSNKNENKIFSGFTSIQNDLEVDCIQDRYDGSDSGFGSELAEDKNTSSLDVAVSTSNISYKTDFTLNQESSFEDLQRTSNEFLSAMEVLKPKFSDSILDTAPLDIRNNYGNVKGILKRNKPVNYGVLTSDVTTVKKRKNINFANVTVFYFPRVQGFTCVPSQGGSTLGMTRVHSASRVFSLPEYIAEQRRIRRNLIQISQSEVSGTNSDDSDSDVGAADVYSESDADVDSDSNGSFLQPVPTRQRRALLKAAGVEKIDSSEKDDYTCACFQAGITCQVDRMNFPCGCTVDGCGNSVGRIEFNPTRVRKHFIHTIMRLEIKKREAQEEEHCNKLAMTSPLISNFSYHDSRHIQPYYQPQHYEHNLNDYNYQSFLPVYDSNNHIAPESSTQNDYQLNNSHNLYEPYQPFSSAFVPLSPDRPRGLSIIDNKPETFTDLLQPYSLPSIESTDSLGIPNIPSTLVSDSFNLETENLGEIIKNTMVESVNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01031965;
- 90% Identity
- iTF_01304176;
- 80% Identity
- -