Rneb046784.1
Basic Information
- Insect
- Rhaphigaster nebulosa
- Gene Symbol
- kn
- Assembly
- GCA_948150685.1
- Location
- OX411309.1:66696560-66712840[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-121 3.3e-117 393.6 0.0 206 391 7 202 5 207 0.98 2 2 6.9e-09 0.00011 22.1 13.2 406 512 196 305 194 323 0.66
Sequence Information
- Coding Sequence
- ATGGAGCTTTTATTGTGTCGTCTGTTCCAGGTCGTAATCTCGACGATGGTATCTGTCGAGGGTCCACTCCTAGCCATCTCGGACAACATGTTCGTCCACAATAACTCCAAGCACGGCAGGAGGGCGAAAAGGATAGACCCTTCGGAAGGTGAATCAGGTCTATACCCACCTTTACCCGTTGCAACACCCTGCATAAAAGCTATCTCGCCAAGTGAAGGCTGGACAAGCGGTGGTTCGACAGTCATCATAATTGGAGACAACTTCTTTGATGGTCTTCAAGTAGTCTTCGGTACGATGCTCGTTTGGAGCGAGCTGATAACCTCCCATGCGATAAGGGTGCAAACGCCACCAAGGCATATACCGGGGGTTGTAGAAGTTACCTTGTCCTACAAGAGCAAGCAGTTCTGTAAGGGTGCGCCTGGCCGTTTCGTATATGTTTCCTTGAATGAGCCCACGATTGACTATGGATTTCAGCGGTTGCAAAAGCTGATACCAAGGCATCCGGGCGATCCGGAAAAGCTTCCCAAGGAAATAATACTGAAAAGAGCAGCAGACTTGGCAGAAGCACTTTATACAATGCAGCCAAGGAACCAACAACTTGCAGCTCCAAGATCGCCTAACAACAACAGCACTACCACTTTCAACTCCTACACTGGCCAGCTGGCTGTGACAGTCCATGAGAACAACGGTCAGTGGACCGAAGAGGAGTACACGAGGGGAGGAGCTGGAAGTGTTTCGCCGAGAGGATACGGTTCCAGCACGAGTACGCCACACTCCAGCAACGGCGGGTACAACAACTCGACGCCGACCTACCCCACGTCTTCCCAGGCTACATCCACGACCCCCGTCATCTTCAACTCCTCCGCACCTAGAGTTGGAAGTCTTGTTTCTTCACCTTTCACCGGAATGAACCCATTTGCTCTTCCGACATGTAATTCACAGAGTTACAGTCCCCTCGTTTCAACACCAAAATGA
- Protein Sequence
- MELLLCRLFQVVISTMVSVEGPLLAISDNMFVHNNSKHGRRAKRIDPSEGESGLYPPLPVATPCIKAISPSEGWTSGGSTVIIIGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYTMQPRNQQLAAPRSPNNNSTTTFNSYTGQLAVTVHENNGQWTEEEYTRGGAGSVSPRGYGSSTSTPHSSNGGYNNSTPTYPTSSQATSTTPVIFNSSAPRVGSLVSSPFTGMNPFALPTCNSQSYSPLVSTPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00372676; iTF_00386084; iTF_01500135; iTF_01309163; iTF_00154295; iTF_00883578; iTF_01365192; iTF_01108172; iTF_01108223; iTF_00930106; iTF_01301374; iTF_01301426;
- 90% Identity
- iTF_01309163;
- 80% Identity
- -