Llin024194.1
Basic Information
- Insect
- Lygus lineolaris
- Gene Symbol
- kn
- Assembly
- GCA_030264115.1
- Location
- JAEMON010000012.1:16729644-16737895[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-98 4.7e-94 316.6 0.0 248 387 43 182 9 184 0.96 2 2 1e-07 0.0011 18.2 7.8 425 510 196 277 186 298 0.60
Sequence Information
- Coding Sequence
- ATGTCCCCGGTGCTATCATCGGCCAAACACTCTCCCGAAGGGCGTCTGCTAAGACGTGTAACGACTCAAGTCGTCTGCCGAGTTCTGGCAGATATGGCTAATGTCACCTGTCTGTACCCTCCTCTACCAGTGGCAACGCCCTGCATCAAAGCCATCTCTCCCAGCGAGGGGTGGACCAGCGGAGGATCCACGGTCATCATCATCGGTGACAACTTCTTCGACGGCCTCCAAGTCGTCTTCGGAACAATGCTCGTCTGGAGCGAGCTCATCACCTCTCATGCCATAAGGGTGCAGACTCCACCGCGGCACATACCTGGAGTGGTGGAGGTCACACTCTCCTACAAGAGTAAGCAGTTCTGCAAAGGGGCTCCTGGGAGATTCGTTTATGTCTCTTTGAACGAACCGACGATTGACTACGGTTTTCAGAGGCTGCAGAAATTAATCCCGAGGCACCCTGGAGACCCCGAAAAATTACCCAAGGAAATAATCCTGAAGAGGGCGGCTGACTTGGCCGAAGCTCTGTACTCGATGCCTCGGAACAACCAGCTCAGCGGACCCCGGTCACCACCACCGAACAATAACACGTCTTTCAACTCGTACTCAGGACAGCTGGCTGTCACAGTACACGAAAATAACGGCCAGTGGACTGAAGAAGAATATGGGAGAGGACAAGCAGGGAGCGTCTCGCCGAGGGGATACGGATCGTCGACGTCGACGCCTCACTCTTCGAACGGCGGCTACAACAGCGCGCCTGGGGCCCCTCCGTACCCTCCAGTCTCTCAACCTACTTCAGgAGTCGGAGGTTTGGTCTCCTCGCCATTCGCCACTATGAACCCCTTCGCTCTTCCCACGTGCAATTCTCAAAGTTATTCCCCCATCGTTGGTCCTTCCTCCAAATAA
- Protein Sequence
- MSPVLSSAKHSPEGRLLRRVTTQVVCRVLADMANVTCLYPPLPVATPCIKAISPSEGWTSGGSTVIIIGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLSGPRSPPPNNNTSFNSYSGQLAVTVHENNGQWTEEEYGRGQAGSVSPRGYGSSTSTPHSSNGGYNSAPGAPPYPPVSQPTSGVGGLVSSPFATMNPFALPTCNSQSYSPIVGPSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01298184;
- 90% Identity
- iTF_01108223;
- 80% Identity
- -