Basic Information

Gene Symbol
kn
Assembly
GCA_031894815.1
Location
JAVIWC010005620.1:2082319-2090812[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.1e-98 6.9e-94 316.5 0.0 248 387 19 158 7 161 0.98
2 2 4.8e-08 0.0011 18.7 7.4 425 511 172 263 162 284 0.59

Sequence Information

Coding Sequence
ATGTCAACCATTAACTCAGGTTTTTTGGCTTTCGCAGGTCTGTACCCGCCTCTCCCTGTGGCGACGCCCTGCATAAAGGCGATTTCTCCCAGCGAGGGCTGGACGAGCGGGGGTTCCACGGTCATCATCATCGGTGACAACTTTTTCGACGGTCTCCAGGTTGTCTTTGGGACGATGCTCGTATGGAGCGAGCTCATCACCTCGCACGCCATCAGGGTCCAGACGCCTCCGAGGCACATACCTGGGGTGGTGGAGGTCACACTCTCCTACAAGAGCAAGCAGTTCTGCAAAGGGGCGCCCGGGagatttgtttatgtttCTCTGAACGAACCAACAATTGACTACGGATTCCAGAGGTTGCAGAAACTCATTCCGAGGCACCCTGGTGACCCCGAAAAATTGCCGAAGGAAATTATTCTGAAGAGGGCCGCGGACCTGGCGGAAGCTCTGTACTCGATGCCTCGGAACAACCAGCTGACCGGTCCCCGAACGCCGCCTCCGAACAACAACACGACGTTCAACTCCTATTCGGGCCAGTTGGCGGTCACGGTTCACGAAAACAACGGCCAATGGACGGAAGAGGAGTACGGACGAGGCCAAGCCGGGAGCGTCTCCCCCAGGGGTTACGGATCGTCGACGTCGACGCCGCACTCGTCCAACGGGGGCTATAACAGCGCGCCCGGGGCACCGCCCTACCCGCCCGTCTCACAGCCGACTTCAGGTACAACCACGATCTTCCATTCCCCTAGAGTTGGAGGTTTGGTTTCGTCGCCGTTCGCCACAATGAACCCCTTCGCCCTACCGACGTGCAATTCTCAAAGTTATTCCCCCATCGTTGGCCCGTCATCCAAATAA
Protein Sequence
MSTINSGFLAFAGLYPPLPVATPCIKAISPSEGWTSGGSTVIIIGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLTGPRTPPPNNNTTFNSYSGQLAVTVHENNGQWTEEEYGRGQAGSVSPRGYGSSTSTPHSSNGGYNSAPGAPPYPPVSQPTSGTTTIFHSPRVGGLVSSPFATMNPFALPTCNSQSYSPIVGPSSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01298184;
90% Identity
iTF_01108223;
80% Identity
-