Rpro000683.1
Basic Information
- Insect
- Rhodnius prolixus
- Gene Symbol
- kn
- Assembly
- None
- Location
- HiC:1702363-1716886[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-98 3.5e-94 316.3 0.0 249 387 10 148 4 151 0.98 2 2 4.1e-08 0.00082 17.9 12.1 425 511 161 250 151 269 0.71
Sequence Information
- Coding Sequence
- ATGATAGGCCTATATCCCCCACTGCCGGTAGCTACGCCCTGTATAAAAGCAATATCGCCCAGCGAAGGTTGGACTAGTGGTGGATCTACGGTCATCATTATTGGAGATAACTTCTTTGACGGCCTACAAGTGGTTTTTGGAACGATGCTCGTCTGGAGTGAGcTGATCACATCTCATGCAATCAGAGTTCAGACACCGCCCAGACATATTCCCGGCGTGGTAGAAGTTACCCTTTCTTACAAGAGTAAACAGTTCTGTAAGGGAGCTCCCGGTCGATTTGTTTATGTCTCTCTGAACGAGCCAACAATAGATTACGGCTTCCAGAGGTTACAGAAACTTATCCCAAGACATCCTGGTGATCCTGAGAAGTTACCAAAAGAAATCATCCTGAAAAGGGCAGCAGATCTAGCGGAAGCTTTGTACAGTATGCCGAGGAATAACCAACTGGGAGCACCCAGAACTCCGCCTCCGAATAATACGTCGTTCAACTCGTATTCAGGACAGCTGGCCGTCACTGTACATGAAAACAATGGACAGTGGACAGAAGAGGAATATGGCAGAGGACAAGCGGGCAGCGTGTCGCCGCGAGGTTACGGCTCTTCGACGTCCACGCCGCACTCCAGTAACGGTGGCTACAACAGCGCGCCGTCCGCCAATTACCCGCCCACCAGCTCCCAGTCAGCCACGGCCATCTTCAACTCTGCTTCCAGAGTTGGAAGTCTGGTGTCGTCCCCATTCGCCACAATGAATCCATTTGGGTTGCCAAATTGCAACTCCCAGGCGTACAGTCCGTTGGTTGGACCTACCTCCAAATAG
- Protein Sequence
- MIGLYPPLPVATPCIKAISPSEGWTSGGSTVIIIGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGAPRTPPPNNTSFNSYSGQLAVTVHENNGQWTEEEYGRGQAGSVSPRGYGSSTSTPHSSNGGYNSAPSANYPPTSSQSATAIFNSASRVGSLVSSPFATMNPFGLPNCNSQAYSPLVGPTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01298184;
- 90% Identity
- iTF_01108223;
- 80% Identity
- iTF_01301374;