Rful021752.1
Basic Information
- Insect
- Rhagonycha fulva
- Gene Symbol
- ARID5B
- Assembly
- GCA_905340355.1
- Location
- HG996556.1:10481386-10484475[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2 1.4e+04 -2.6 0.0 35 51 51 68 46 79 0.81 2 2 4e-24 1.3e-20 74.4 0.0 1 89 164 250 164 250 0.93
Sequence Information
- Coding Sequence
- ATGTTATTATTCTTTTCATTTGAATTAATTAGTGTTATTTGTATTTCAGACTCGAAATATAACACAAAATCGTCAGTAGTTATATTGAGCTACTCAGAGTATTGTCGATATCGTTCAATAATGAAACGATTGGAAGGTGTTGAGGAACAATACTTAAAAAACACAGTAATAAAACTTTTGGGTGGTTTTTCTGCTCCAAATCAAAATACCCGAGTTTTGTTCTGTAGAGATACATTCGAATATCCTGAACTGGAAGGACACGAACTTTTGTGTAATCATTTGGCACCTAAATTAAAAGGAAGGCCTCGAGGTCGTCGAAAAAAGCGTAGTTTGTCTCCAGGATCTGAAAGCAACGAATCGGAATGTTCAGTTTCGAATACAGTTAGCACTACCAAAACTAAAATAATGACTGAAGGTAATCCAAATGGATTCCGATCTGAGTGTGGTATTTCTACTAGGCGTAGTACACGTGCAACTATAGGAAACTCAGAAAACAAAGAATTTATTAATAAATTAATCGCTTTTATGAAAGCGAATCATACGCCAATGGGTCGAATACCATCTTTGGGTTATAAAGAACTGGATCTTCACTCGTTTTTCACGAAAGTTGAAAAATTGGGTGGATACGATGCAGTTACATCGAATAGATTATGGAAATCAATTTTTGATGATCTCAGTGGCAATTACATTAGTACAAGTGCAGCTACCGTTATTAGAAGACATTACGAAAGATTTTTGTTGCCATACGAACGCTATCTTAAAGGAGAAGAGTACAAACCTATCTCGTCAATTAAACGAATTAAATGCAGTTCGGGTAGCGGAAGTGATGCGGAGACCAGCGAGGGTACAAGTTGTAGTGGTAATAGTACACCTGTTCCACAACTCGTTCCGGCTTCTCTTCCCTTCTCATCCGCAGAAAAGGAACACAAAAATTCGAGATTATCGGAAAGCAGCAGTGATAGGGGAAAATTAGAAGCAAAAACTTCGTCCCTTCGAAGTGTACGGTTAAAGTCCGAACGCTTACGAGAAAATTCATCCAAAGAAACGTCACCACCTATAGTAACACAAGAAAACGTAACATATACCGAAAATAACAATAAAATATTAAAAGATGAAAATATAAACAGTAAAATTGAGTTAAAGGGAAACGGTTTAACAGTGGAAGTTATTAATAATAAAAATATTGTGCCAGAAGTAAAGGAAGAGATTGTAAAAGTTGAAGATGAACCCGCTTTGGCGGTTAGTGTACAAAAATTAAGGAAAAGTTTATCGTTAAGTCCGGAAGAAGTTAAGGAGAACATAGCGACGTGCAATACGGATGCGTGTCAAAACAATTCCGACGTTGATCTCACCGAGGTGCCATACAGACCAAAAACGGAACAGATAAAGTCGGAAACGGAAAGTTCCGTTAACAATTCAATATTACATAGTTTTAAGAAGCGCAAATTGGACATTTTAAAAGAAGGTGGATTGGAAGTGACGCCTGTTAAGCCATGTTCGGACGTAAAAGAAGTCAAAGATAATAGGTCTAACGTTACAAACCAACCAGGCGTAGTAACGACGACTGTGGGACAACTTTCCATAACTTTAACGCCAGATAAACAAGAAACTAACGGCGATATACAAAATTTACCGGAGAATGTAACAGGGATGATACGGTCGAATTACAAGACGCCGATTAAGAAAAACGTGACGCCTCTAAAAAATTCGTTTCCATATTTGAACGGCCAATCGCCGCCAATTCCTATTCAGTCAAAATCGATATATTCGTATTCCGAAAAAACCATATATGGAAATCCAAAGGATTATTTCATGCCTCCTCCGCGACCACCACCACAAGTTCCCAAATTTGTGGATACTCCACATAAGCAAACCGGAGGCGATATTTTAGACTTGACAATAAGAAGTCCACAGAAGCCAATAGTGGAAATTATGAGAGTGCCGCAGAGCGCGACGCGCTCAATTGTAAACCATAAAGATTCTTATCATAGGAAGGAATACAAAAATATGGCAGCTTCTTTACCTGTTCTGGACGCAAGAGTAGGTTCTAATTTAGAGATCACTTTGGTAGGTTCACACAACACTCCGCCCCAACAAACAAAACTGCCAGGTCGACCTCCACAGTTCATTCCTGGACAACCACACATGGGCAACATAAATCAAAAGTACGGAAATTACAATATAAATAACAAAAGCATACCCAAACGACCTCCCCCACCTGCAAGTGCATCAGACAACAAAAAAGAAAATGGACGACTACCTTACCAGCACATGACACCTCTACCACCATCCTTTTCATCAGACACCAGGCATAGATCAAATTCCTACAACAGGCATCTACATCAAAAGATTGAAAATCGAACTAAATCATCGACTTCGTCAACGCACCAAACTCCACCAAAATCAAACAACTCCACCCATGTAATGCCCGAATATTTAAACCAACTTTCCATGGCCTCTAAAATGATGCCACCCTATGTGCCCCCAATGGACCCCCTCTACTTTTCGGCGTTTCAAAATTTATACCCACACGGCTCACTTCCCAACATGCAGCCATATTTTCCCGTTCCAACACCTGAACAACTTCAGTTTTATACCGAATTACTAGCCCATAATTCTCAAATGCGATTTCCGTTTCCTTATCCACAAGATTGCAATCCTTCCTTATCAAATGGTACCGCTGAAATCAATAGGTATAAAAAACAATAA
- Protein Sequence
- MLLFFSFELISVICISDSKYNTKSSVVILSYSEYCRYRSIMKRLEGVEEQYLKNTVIKLLGGFSAPNQNTRVLFCRDTFEYPELEGHELLCNHLAPKLKGRPRGRRKKRSLSPGSESNESECSVSNTVSTTKTKIMTEGNPNGFRSECGISTRRSTRATIGNSENKEFINKLIAFMKANHTPMGRIPSLGYKELDLHSFFTKVEKLGGYDAVTSNRLWKSIFDDLSGNYISTSAATVIRRHYERFLLPYERYLKGEEYKPISSIKRIKCSSGSGSDAETSEGTSCSGNSTPVPQLVPASLPFSSAEKEHKNSRLSESSSDRGKLEAKTSSLRSVRLKSERLRENSSKETSPPIVTQENVTYTENNNKILKDENINSKIELKGNGLTVEVINNKNIVPEVKEEIVKVEDEPALAVSVQKLRKSLSLSPEEVKENIATCNTDACQNNSDVDLTEVPYRPKTEQIKSETESSVNNSILHSFKKRKLDILKEGGLEVTPVKPCSDVKEVKDNRSNVTNQPGVVTTTVGQLSITLTPDKQETNGDIQNLPENVTGMIRSNYKTPIKKNVTPLKNSFPYLNGQSPPIPIQSKSIYSYSEKTIYGNPKDYFMPPPRPPPQVPKFVDTPHKQTGGDILDLTIRSPQKPIVEIMRVPQSATRSIVNHKDSYHRKEYKNMAASLPVLDARVGSNLEITLVGSHNTPPQQTKLPGRPPQFIPGQPHMGNINQKYGNYNINNKSIPKRPPPPASASDNKKENGRLPYQHMTPLPPSFSSDTRHRSNSYNRHLHQKIENRTKSSTSSTHQTPPKSNNSTHVMPEYLNQLSMASKMMPPYVPPMDPLYFSAFQNLYPHGSLPNMQPYFPVPTPEQLQFYTELLAHNSQMRFPFPYPQDCNPSLSNGTAEINRYKKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01293358; iTF_00272241; iTF_00267912; iTF_00270830; iTF_00927286; iTF_00269533;
- 90% Identity
- iTF_00272241;
- 80% Identity
- -