Cnig016508.2
Basic Information
- Insect
- Cantharis nigra
- Gene Symbol
- ARID5B
- Assembly
- GCA_958510845.1
- Location
- OY294030.1:34344101-34346941[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7 2.4e+04 -3.4 0.0 36 50 12 27 10 32 0.78 2 2 1.6e-24 6e-21 75.5 0.0 1 89 124 210 124 210 0.93
Sequence Information
- Coding Sequence
- ATGAAACGATTGGAAGGTGTGGAGGAGCAATACTTAAAAAACACAGTAATAAAGCTTTTGGGTGGTTTCTCTGCGCCAAATGAAAATACCCGAGTTTTGTTCTGCAGAGATACATTCGAATATCCCGAACTAGAAGGACACGAACTTTTGTGTAATCACTTGGCGCCCAAATTAAAAGGACGACCCCGAGGTCGTCGAAAAAAGCGTAGTTTATCTCCAGGATCTGAAAGCAATGAATCAGAATGTTCAGTTTCGAATACAGTTAGCACTACCAAAaccAAAATAATGACTGAAGGTAATCCTAATGGATTCCGATCTGAATGTGGTATTTCTACTAGACGTAGTACACGTGCAACTATAGGAAACACAGAAAATAAAgaattcattaataaattaatcgcTTTTATGAAAGCGAATCATACGCCGATGGGTCGAATACCCTCATTGGGTTATAAAGAACTGGATCTTTACTCGTTTTTCACGAAAGTTGAAAAATTGGGTGGATACGATGCAGTTACAACGAATCGATTATGGAAATCCATTTTTGATGATCTCAGTGGCAATTACATTAGTACAAGTGCAGCTACCGTTATTAGAAGACATTACGAAAGatttttgttgCCATACGAACGCTATCTTAAAGGAGAAGAGTACAAACCTATCTCGTCAATTAAGCGAATCAAATGCAGTTCTGGTAGTGGAAGCGATGCGGAAACCAGCGAAGGTACAAGTTGTAGCGGTAATAGTACACCTGTACCCCAACTTGTACCGGCCTCTCTTCCATTCTCATCCACAGAAAAGGAATCCAAAaattcaAGATTATCGGAAAGCAGTAGTGATAGGGGAAAATTTGAAGCAAAAACGTCGTCACTTCGAAGTGTCCGTTTAAAGTCCGAACGCTTACGAGAAAATTCATCCAAAGAAACGTCACcgccaattaaaattcaagaaaacgtaaaatatacagaaaataataataaaatactaaaagaTGAAAATATAAACAGTAACATTGAGTTAAAAGGAAACGGTTTAAcagtggaagttattaataataaaaatattgtgccAGAAGTAAAAGAAGAAATAGTGAATGTTGAAGATGAACCCGCTCTTACGGTTAGTGTACAAAAGTTAGGGAAAACTCAAGCTTTAAGTCCGGAAGAAGTTAAGGAGAATATCGCGACGTGCAATACGGATGCGTGTCAAAACAATTCTGACGTTGATCTCACCGAGGTGCCATACAGACCAAAAACGGAAACGATAGTGGTGGAAACGGAAAGTTCcgttaataattcaatattacaTAGTTTTAAGAAgcgtaaattggacattttaaAAGAGGGTGGCTTGGAAGTGACACCGGTTAAGCCATGTTCTGACGGTAAAGAAGTTAAAGATAGCAATAGGCCTAGCGTTATACACCAACCTGGCGTTGTAACGACGACAGTGGGGCAGCTTTCCATAACTTTAACGCCAGACAAACAAGAAACCAACGGTGATATACAAAATTTACCGGCGAATGTAACGGGAATGATACGATCGAATTACAAAACGCCGATTAAGAAGAACGTGACACCTATGAAAACTTCGTTTCCATATCTAAACGGCCAATCGTCACCAATTCCTATTCAGTCAAAATCGATATATTCGTACTCTGAAAAAACCATATATGGAAATCCTAAGGATTATTTCATGCCTCCCCCGCGACCGCCACCACAAGTTCCCAAATTTGTGGACACTTCTCATAAACAAACCGGAGGAGATATTTTAGACTTGACAATAAGGAGTCCACAAAAGCCAATAGTGGAAATCATGAGAGTGCCGCAGAGCGCAACGCGCTCACTTGTGAATCATAAAGATTCTAATCATAGGAAGGACTACAAAAATATGGCAGCTTCTTTGCCGGTGTTGGACGCCCGAGTTGGTTCAAATTTAGAAATCACTTTGGTAGGTTCACAAAATTCGCCCCAACAAACGAAACTACCAAGTCGACCGCCACAGTTCGTTCCTGGACAAACACTTATGGGCAACATGAATCAAAAGTAcggaaattataatataaacaataaaagtaTATCGAAGCGACCTCCCCAACCAACAGAAAACAAGAAAGAAAATGGACGATTACCTTACCAACACATGACTCCTCTACCGTCGTCTTTTGCAACCGACAACCGGCATAGGTCTAATTCCTTCAATAGGCATTTAcaccaaaaaattgaaaatcgaacTAAATCATCGAGTGGTTCAATGCAACATCAAAATGCACCTAAATCAAACAACTCCTCCTCCCATTTAATGCCCGAATATCTGAACCAACTTTCGATGGCTTCAAAAATGATGCCTCCTTACGTACCGCCAATGGATCCCATGTACTTTTCggcttttcaaaatttatacccACATGGTTCACTTCCCAACATGCAACCTTACTTTCCCGTTCCAACACCGGAACAACTTCAGTTTTATACCGAGTTATTAGCCCACAATTCGCAAATGCGATTTCCGTTTCCTTATCCACAAGATTGCAATCCTTCATTATCAAATGGCACAGCTGAAATCaataggtataaaaaacaataa
- Protein Sequence
- MKRLEGVEEQYLKNTVIKLLGGFSAPNENTRVLFCRDTFEYPELEGHELLCNHLAPKLKGRPRGRRKKRSLSPGSESNESECSVSNTVSTTKTKIMTEGNPNGFRSECGISTRRSTRATIGNTENKEFINKLIAFMKANHTPMGRIPSLGYKELDLYSFFTKVEKLGGYDAVTTNRLWKSIFDDLSGNYISTSAATVIRRHYERFLLPYERYLKGEEYKPISSIKRIKCSSGSGSDAETSEGTSCSGNSTPVPQLVPASLPFSSTEKESKNSRLSESSSDRGKFEAKTSSLRSVRLKSERLRENSSKETSPPIKIQENVKYTENNNKILKDENINSNIELKGNGLTVEVINNKNIVPEVKEEIVNVEDEPALTVSVQKLGKTQALSPEEVKENIATCNTDACQNNSDVDLTEVPYRPKTETIVVETESSVNNSILHSFKKRKLDILKEGGLEVTPVKPCSDGKEVKDSNRPSVIHQPGVVTTTVGQLSITLTPDKQETNGDIQNLPANVTGMIRSNYKTPIKKNVTPMKTSFPYLNGQSSPIPIQSKSIYSYSEKTIYGNPKDYFMPPPRPPPQVPKFVDTSHKQTGGDILDLTIRSPQKPIVEIMRVPQSATRSLVNHKDSNHRKDYKNMAASLPVLDARVGSNLEITLVGSQNSPQQTKLPSRPPQFVPGQTLMGNMNQKYGNYNINNKSISKRPPQPTENKKENGRLPYQHMTPLPSSFATDNRHRSNSFNRHLHQKIENRTKSSSGSMQHQNAPKSNNSSSHLMPEYLNQLSMASKMMPPYVPPMDPMYFSAFQNLYPHGSLPNMQPYFPVPTPEQLQFYTELLAHNSQMRFPFPYPQDCNPSLSNGTAEINRYKKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01291257;
- 90% Identity
- iTF_00272241;
- 80% Identity
- -