Rlut008927.1
Basic Information
- Insect
- Rhagonycha lutea
- Gene Symbol
- ARID5B
- Assembly
- GCA_958510855.1
- Location
- OY294037.1:13137351-13140276[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5 1.8e+04 -2.8 0.0 36 51 12 28 8 37 0.81 2 2 3.8e-24 1.4e-20 74.5 0.0 1 89 124 210 124 210 0.93
Sequence Information
- Coding Sequence
- ATGAAACGATTGGAAGGCGTTGAAGAGCAATACTTAAAAAACACAGTAATAAAACTTTTGGGTGGTTTTTCTGCCCCAAATCAAAATACCCGAGTTTTGTTCTGTAGAGATACATTCGAATATCCTGAACTGGAAGGACACGAACTTTTGTGTAATCATTTGGCACCTAAATTAAAAGGAAGGCCTCGAGGTCGACGAAAAAAGCGTAGTTTGTCTCCAGGATCTGAAAGCAACGAATCCGAATGTTCAGTTTCGAATACAGTTAGCACTACCAAAACTAAAATAATGACTGAAGGTAATCCAAATGGATTCCGATCTGAGTGTGGTATTTCCACTAGGCGTAGTACACGTGCAACTATAGGAAACTCAgaaaataaagaatttattaacaaattaatcgCTTTCATGAAAGCGAATCATACGCCAATGGGTCGAATACCATCCTTGGGTTATAAAGAACTGGATCTTCACTCGTTTTTCACGAAAGTTGAAAAATTGGGTGGATACGATGCAGTTACATCGAATAGATTATGGAAATCAATTTTTGATGATCTCAGTGGCAATTACATTAGTACAAGTGCAGCTACCGTTATTAGAAGACATTACGAAAGaTTTTTGTTGCCATACGAACGCTATCTTAAAGGAGAAGAGTACAAACCTATCTCGTCAATTAAGCGAATTAAATGCAGTTCGGGTAGTGGAAGTGATGCGGAGACCAGCGAAGGTACAAGTTGTAGTGGTAATAGTACACCTGTTCCACAACTCGTTCCGGCTTCTCTTCCCTTCTCATCCACAGAAAAGGAACACAAAaattcGAGATTATCGGAAAGCAGTAGTGATAGGGGAAAACTAGAAGCAAAAACTTCGTCCCTTCGAAGTGTACGGTTAAAGTCCGAACGCTTACGAGAAAATTCATCCAAAGAAACGTCACCACCTTTAATAACACAAGAAAACGTAACATAtaccgaaaataacaataaaatattaaaagatgaaaatataAACAGTAAAATTGAGTTAAAGGGAAACGGTTTAACAGTGgaagttattaataataaaaatattgtgccAGAAGTAAAGGAAGAGATTGTGACAGTTGAAGATAAACCCGCTCTGACGGTTAGTGTACAAAAATTAAGGAAAAGTCTATCATTAAGTCCGGAAGAAGTTAAGGAGAACATAGCGACGTGCAATACGGATGCGTGTCAAAACAATTCCGACGTTGATCTCACCGAGGTGCCATACAGACCAAAAACGGAAACGAAGTCGGAAACGGAAAGTTCCGTTAACAATTCAATATTACATAGTTTTAAGAAGCGCAAATTGGACATTTTAAAAGAAGGTGGTTTGGAAGTGACGCCTGTTAAGCCATGTTCTGACGTTAAAGAAGTCAAAGATAATAGGTCTAACATTATAAACCAACCAGGCGTAGTATCGACGACAGTGGGACAACTTTCCATAACTTTAACGCCAGATAAACAAGAATCTAACGGTGATATACAAAATTTACCAGCAAATGTAACGGGGATGATACGGTCGAATTATAAGACGCCGATTAAGAAAAACGTGACGCCTATAAAAAATTCCTTTCCATATTTGAACGGCCAATCGCCGCCAATTCCTATGCAGTCAAAATCGATATATTCGTATTCCGAAAAAACCATATATGGAAATCCAAAGGATTACTTCATGCCTCCTCCGCGACCACCACCACAAGTTCCCAAATTTGTGGATACTCCTCATAAACAAACCGGAGGCGATATTTTAGACTTGACAATAAGAAGTCCACAGAAGCCAATAGTGGAAATTATGAGAGTGCCGCAGAGCGCGACACGCTCACTTGTAAACCATAAAGATTCTTATCATAGGAAGGAATACAAAAATATGGCAGCTTCCTTACCCGTGCTGGACGCAAGAGTAGGTTCAAATTTAGAAATCACTTTGGTAGGTTCACACAACACGCCGCCCCAACAAACAAAACTACCAGGTCGTCCGCCACAATTCATTCCTGGACAAACACATATGGGCAACATAAATCAAAAGTACGGaaattacaatataaataacaaaagcATACCAAAACGACCTCCCCCACCTACAAGTACACCAGACAAcaaaaaagaaaatggaagaCTACCTTACCAGCACATGACACCTCTACCCCCATCCTTTTCATCAGACAACAGGCATAGATCAAATTCCTACAACAGGCATTTACATCAAAAGATTGAAAATCGACCTAAATCATCGACTTCTTCAACACACCCAACTCCACCAAAATCAAACTCCACCCATCTAATGCCCGAATATTTAAACCAACTTTCCATGGCTTCTAAAATGATGCCACCCTACGTACCCCCAATGGACCCCCTCTACTTTTCGGCGTTTCAAAATTTATACCCACATGGCTCACTTCCCAACATGCAGCCGTATTTTCCCGTTCCAACACCTGAAcaacttcaattttataccgAATTACTAGCCCACAATTCCCAAATGCGATTTCCCTTTCCGTATCCACAAGATTGCAATCCTTCCTTATCAAATGGCACCGCTGAAATCAATAGGtataaaaaacaataa
- Protein Sequence
- MKRLEGVEEQYLKNTVIKLLGGFSAPNQNTRVLFCRDTFEYPELEGHELLCNHLAPKLKGRPRGRRKKRSLSPGSESNESECSVSNTVSTTKTKIMTEGNPNGFRSECGISTRRSTRATIGNSENKEFINKLIAFMKANHTPMGRIPSLGYKELDLHSFFTKVEKLGGYDAVTSNRLWKSIFDDLSGNYISTSAATVIRRHYERFLLPYERYLKGEEYKPISSIKRIKCSSGSGSDAETSEGTSCSGNSTPVPQLVPASLPFSSTEKEHKNSRLSESSSDRGKLEAKTSSLRSVRLKSERLRENSSKETSPPLITQENVTYTENNNKILKDENINSKIELKGNGLTVEVINNKNIVPEVKEEIVTVEDKPALTVSVQKLRKSLSLSPEEVKENIATCNTDACQNNSDVDLTEVPYRPKTETKSETESSVNNSILHSFKKRKLDILKEGGLEVTPVKPCSDVKEVKDNRSNIINQPGVVSTTVGQLSITLTPDKQESNGDIQNLPANVTGMIRSNYKTPIKKNVTPIKNSFPYLNGQSPPIPMQSKSIYSYSEKTIYGNPKDYFMPPPRPPPQVPKFVDTPHKQTGGDILDLTIRSPQKPIVEIMRVPQSATRSLVNHKDSYHRKEYKNMAASLPVLDARVGSNLEITLVGSHNTPPQQTKLPGRPPQFIPGQTHMGNINQKYGNYNINNKSIPKRPPPPTSTPDNKKENGRLPYQHMTPLPPSFSSDNRHRSNSYNRHLHQKIENRPKSSTSSTHPTPPKSNSTHLMPEYLNQLSMASKMMPPYVPPMDPLYFSAFQNLYPHGSLPNMQPYFPVPTPEQLQFYTELLAHNSQMRFPFPYPQDCNPSLSNGTAEINRYKKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01291257;
- 90% Identity
- iTF_00272241;
- 80% Identity
- -