Rmor035395.1
Basic Information
- Insect
- Rhagium mordax
- Gene Symbol
- tfip11
- Assembly
- GCA_963680705.1
- Location
- OY796660.1:71133581-71138953[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-96 7.3e-92 309.7 14.6 1 275 407 678 407 678 0.98 2 2 0.16 3.5e+03 -0.8 0.2 157 189 690 721 681 732 0.54
Sequence Information
- Coding Sequence
- ATGTCGGAAGACGAAATGGAGAAGTTTGAAATTACGGATTACGATCTGGAAAACGAATTTAACCCACAcagaattagaaaaaaaaatagtaaacatCATCAGATATATGGCATCTGGGCTGATGATAGTGATAGTGAAGAGACAGAGAAGAAATCATTCGCGTATAAGATTAACAAGCGACCCAAAAACTATACGACTCATATTGGATTTGTAGCAGGTGGAGTTCAACAGGCAGGAAAAAAAGACAAAGGAAAGGCGAATGTTAAGAAGGAAAAAGACGAATCGGATGATGAACTACCCACTACGTCTTTTAAAACACGTGATAGCTCGGACGAGTCCGAGGAAGAAGTCCCAAGAGCAGGATTTGGCGCTGGAAAACTTAAGAAAAAACCTACACAGTCTACTGTCACTGAAATAACTGGCGATATAGCAGGTTTAAGACGCAAGAATACCTTAAATCCGTCACTAATAAACCAAGGAGTGGGTAACTGGGAAAAGCATACCAAGGGAATTGGGGCAAAGCTTCTTCTTCAAATGGGTTTCCAACCTGGTAAAGGTTTAGGAAAAGATTTGCAAGGTATTTCTGCTCCAGTAGAGGCACATTTAAGAAAGGGAAGGGGTGCTATTGGAGCTTACGGACCGGAGAAACCCGCaagtattccaaaaataaaagaaAAGGTGAAGGGAGAGAGGGGTGACGGCGATTATGACGATTCCAAGAAAGGAGAATCTAAGTGGAAGAAAAATGATTCTTTAAAGAAGAAAACGAGATATTATTATCGAAGCGTAGATGATGTTATTGAAAAAGGTAAACGTCCTGGAGCTTATAGAAATTTGGGATCCGCAAGTGAACTCAGTAAAGTCAAGGTGATAGACATGACTGGTCCGCAGCAGAGAGTACTAAGTGGATACCATGCCCTTAGCGGATTAAAAGCGCCTCCCGGGGTGGAACATTTTGAGGACGTTGTGCATAAAAAGTGTTCCAATTTTGCGCTACCAGAAATTCAACACAACCTGGATTTGTTAGTAGATATGTGTGAGCAgGATATTATAAGAATAGATAGAAATACTAGATACAATGAAGACAAAATTATAGCTTTAAAACAAGAAGAAAGTGCTTTACGAGACGTAATAAGAAAGGAAGATATTCTAATCGATAATTTAAACCAAGTTATGGATATTGTTAACAAACTTATGGATCCCACTCAAGGCTATTCTCTAGGGCAGATAGCAAATATTTTCAGGAATTTACAGGAGGAACATTACGATGAATACTGCAAATACGAACTAGGAGAATTTGCGCCGGTCTTAATCGATCCCCTTTTAACATCCGCGTTAGCTAACTGGAATCCATTATCTCAGCCGAATCAGTATACAGATGTTTTTGGACAGTGGCAGCATATCTTGGACAAGCCCAGGCAACGTGGGAATCTAGAAGGTAATAATATGGGAATACAGCCATATGATAGTCTCATATGGCATACTTGGATGCCTGTTATGAGAACTTGTGTTAGTGCTTGGAATCCTCATGATTGCGACACGTTAATTACTCTGGTAGAGACATGGAAACCACTTCTTCCACAATGGATTGTAGACAACATTTTTGATCAGCTCATAATGCCAAAACTACTTACCGAAGTTAATACTTGGAATCCGCTTACTGACACGACACCAATTCACATTTGGATTCACCCGTGGATTCCTCTGctagattCCAGACTACAGGCTACGATATACCCAATTATTCAAGAAAAGTTAGGAACAGCCTTAAGCAATTGGCACCCGTCGGATGTATCGGCGAAATTAATGCTCCAACCATGGCAACGGGCTCTTTCGCCAGGAGCATTTGTTGCTTTTCTCCTTAAGCACATCGTACCTAAattgcaaatttgcatgcagtCTCTTGTAATAAACCCCCACCAACAACATTTagATCCTTGGTACTGGGTGATGGACTGGAATAGTATGCTCTCCGTTCCAAATATGACGCTCATTTTAGACAAGTTTTTCTTTCCGAGATGGCTGCAAACACTCGCTATGTGGTTGAATCACAATCCAAACTATTCGCAAGTCACAGAGTGGTATTCTGGATGGAAAAGGATGCTATCCGAGGAGCTACTAAGTCAACCAACTATTAAAGAAAATTTTCACAAAGCGCTCGATATGATGAATAGAGCAATCAACATAGCTCAACAACCAGGTGCCAAGGAGTCTATATCATATCTTAAAAATATGGAGGCTAATGGTCTTACTAATGGTCCACTGCCATCCCAACCACCTAGAGTCGAGAGCCTGGCAGAAGCAGTGAGAACAGCGGCTAAAATTCCGCAAGGGTTTAAGGACCTGGTTACAAAAAGATGCGAAGAGAGAGGCATTATATTTGTGCCAATTCGAAATAAATATCACGAGGCTAAACAAGTTTATCGAATTGGATCAAATGGTGTACAGTGTTACATAGACaggaatgttattttttattcacagaATAACTCGACCTGGATACCAACCTCCCTCAATAAGTTGCTGGATATTgcataa
- Protein Sequence
- MSEDEMEKFEITDYDLENEFNPHRIRKKNSKHHQIYGIWADDSDSEETEKKSFAYKINKRPKNYTTHIGFVAGGVQQAGKKDKGKANVKKEKDESDDELPTTSFKTRDSSDESEEEVPRAGFGAGKLKKKPTQSTVTEITGDIAGLRRKNTLNPSLINQGVGNWEKHTKGIGAKLLLQMGFQPGKGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKPASIPKIKEKVKGERGDGDYDDSKKGESKWKKNDSLKKKTRYYYRSVDDVIEKGKRPGAYRNLGSASELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHFEDVVHKKCSNFALPEIQHNLDLLVDMCEQDIIRIDRNTRYNEDKIIALKQEESALRDVIRKEDILIDNLNQVMDIVNKLMDPTQGYSLGQIANIFRNLQEEHYDEYCKYELGEFAPVLIDPLLTSALANWNPLSQPNQYTDVFGQWQHILDKPRQRGNLEGNNMGIQPYDSLIWHTWMPVMRTCVSAWNPHDCDTLITLVETWKPLLPQWIVDNIFDQLIMPKLLTEVNTWNPLTDTTPIHIWIHPWIPLLDSRLQATIYPIIQEKLGTALSNWHPSDVSAKLMLQPWQRALSPGAFVAFLLKHIVPKLQICMQSLVINPHQQHLDPWYWVMDWNSMLSVPNMTLILDKFFFPRWLQTLAMWLNHNPNYSQVTEWYSGWKRMLSEELLSQPTIKENFHKALDMMNRAINIAQQPGAKESISYLKNMEANGLTNGPLPSQPPRVESLAEAVRTAAKIPQGFKDLVTKRCEERGIIFVPIRNKYHEAKQVYRIGSNGVQCYIDRNVIFYSQNNSTWIPTSLNKLLDIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00886019; iTF_00755634; iTF_01014485; iTF_01310520; iTF_00722042; iTF_01226912;
- 90% Identity
- iTF_00886019;
- 80% Identity
- -