Rluc030567.1
Basic Information
- Insect
- Reticulitermes lucifugus
- Gene Symbol
- ttk
- Assembly
- GCA_026260175.1
- Location
- JAKCWW010009032.1:11223-17498[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2e-15 4.9e-13 49.9 0.1 2 105 20 118 19 122 0.92 2 3 4.5e-18 1.9e-15 57.7 0.0 6 101 144 240 139 244 0.88 3 3 1.1e-13 4.7e-11 43.5 1.2 1 84 288 368 288 378 0.87
Sequence Information
- Coding Sequence
- ATGCAGTTTCAAGCCGTCCAATGGGAGGATCACTTTGATCACTTGGTGACAACACTGAAGGACTTTATGTTACTAAACATATTAACTGACACTACTCTTGTGACAGGAAATCTCAAAGTGCCAGTGCATCGGGTGATAATATCATGTTACAGTTCCTATCTAAAACAGTTACTGACTAATGAAATTCAAAACTGTTATATATTGATTTGTGACACTGAGGAATCACTTCTGCAAGTTCTTGTTAGTTACATCTATACTGGTGTAACTTCAGTTCCTATATCCAGTTTGAATGACTGGTACAAAATGTCCAAATTGCTGAGATTAGATGGTGTATTAGAGGCTGCCAGAAATGATTGTTCTGAAGACGTGGCTTATTTTATGTGGCCACGACACGAAGAAATGGTTCTCCAGTATCTTTGGCGATCTCGGTCTGATCCAGCAGAGTGTGATGTCATTTTAGTGACGGACAGTTTGTCACAGACTTTTGCACATTCTTGCATTTTGGGTGCATGCAGTAAACATTTGCTCAACATTTTCCTCAGGCATAATGAAAGGAAGAAAAAGAAGCCATATGTGTTGATTCTTCAGAATGTCAGAAGTGAAGATCTTGAGGCTGTTCTTGAGTTCTGTTACAGAGGAACTGTTTCTGTATTTGAAGGAAACATTAGTTCCATTTATGACACAGCTGAACTATTAGGCGTTCAGAATCTTTGTAGCAAACTGATTTCTATAGATCCTATGATCAAAAAAATGTCTGAAATAAATGGAACGAACTATATTGCATCAAATGTTATCAGTAGGATAAAGGCTTGTCATTTCTCGTCCCAACAGAATGAACATGCTCTGCAACTCCAAAATGTCTTCCAACACTTTTTTGAGTATGAAGACTTGGTTGATATAACATTACTCAAAGGCAAACAGAGCTTCACAGCTCACATTGCTGTATTAAGTGCTTTTAGCATGTACTTTAAAAACCTTACCAAATGTCTTCAACATAACATGAAAGATGCTTTTGTACTCGTCAAAGACTTGCAGACTCAGCATGTACAGGCTTTTCTAGATTATATATACAAAGGAATGGCAGAGTTTGCAGGGACTGCAGAGGTGTTTTGTGAGGTCATGTCAGACTGGATTGATTTCAGTGTGTTGTCAATTTTTGAGTCAGAAACATGTCATCTTCTAACTAATGCAACATCTGTAATGAAGCAGAAGGCAGAATTTACTGAATCACTGGAAGAACAGAACATTTTTCATTCTGATGACATTCTCTGCCCAAATATGCAACAAGAAGAAATTCTAGAGAAAGGTGAAACTACGCAGCAAGGAGATTGCACTGAAAGTGGACAAAATTCCAGAAACCTAGAGAATGTTATCATTTTGGAAATGTCTCCTATAACCACAGAAGCATTGGAAGAAGTGGAACCGTTTGAAGGGAGTGGAGATGAGAAAACAATTGAAAGACCTATGAAACAAGACTGGAAGAACTTGAAAAATGAGTGTCAAATGAATGTTGAGGATGACCTAGCAGACAGAAGCACAGTGTCAGATGAAGATGGAGCAATAGAAGGAGCAGATGTAGAGGCAGCAGAAAACAGACCGCATAAGAGATGGAGAGAAAGGGATTCTGTTTTAACATGTTATACATGTAATGAAAGTTTTGAATCACGGAAAATGCTGAGGGAGCATTTGATCATTCATCCAAATGGGAGAGTTATGAAGTGCAGTTACTGCGGGAAGGGATTTGATAGACCAAGTCAGATGGAACTTCATATTCGCATACATACAGGTTCTAAACCATTTTCTTGTAAACAGTGTGGCCATGCTTTTGCAGCAAAGAGTGCACTTCGGAAACACATTGATATTCATGCGAAGgataagggcaaaatgtttgagtgtgctgtatgtaacaagtcattttcaagaaaggaatacctggaggaacatatcaggacacatactggcaacaaaccatttgagtgttcgatatgccacaagacttttgttggccgcactggtctgaaccaccacaggaaaacgcatgCAGATGCCTGCGAGAAGAAAGATTCTGTGTGTGAAGTGTGTGGGAAGAGCTTCACACGCCACGCTCTGTGGACTCATGTCAAGTCACACGAAAAGACCCACTGCTGCCACCATTGCAACAAGTGCTTCTCTACTGCTTCTGCATTACGAGTTCATATAACAGGCACACACCTTGGATGCAGGAGTTATCAGTGTGAAAGATGTGGCAAAGGTTTCATACAAAAGAACCATCTGATCCGCCACATGAAGGTACATGACAACACAAGAGATGTGCCGAATACAAAGCCATTTCTGTGCGGAAAGTGCCCACGAACATTTAAAACCAAAACCAAACTTCAGTCACACGCACGGGTAGAACATATAGAACCAGGAGACCGTCCCTACTCTTGTGAGATCTGCAACAAACGGTTTGCAGGTCGCAGCACAGTTATCTACCATCGCCGCGCacacacaggtgaacgtccacatggttgttcaacttgtggcaagaaattcatgcgtccagatgctctgcgccaacacatgatgtgtcatactggtgagcgtcgacatcagtgctctgtttgtagcagaaagtttgcgACCAGAAGTACTCTGAACAAACATGTTGAATCGCATAAGGAAACAACTGAGAAAGAAACATCTTTCAGCTGTGATGTGTGTCATAAAGGTTTTCAGTCTGAAACACAGCTGTTATTACATTCTCGAGTGCATAACAGCTGTAGACCTTTACAGTGTCATGTCTGTCACAAATCATTCCGTTACCAGGACAGTCTAACAAAACATCTAAACATTCATAATGTTGCACAAGATGACACTCCTAATAATGAGTTATCATGCATATATTCTTTTCAAATTTGTGGACAGACATTTGAATTGAATAGCCATACCAAGGAAACTGAAGACCACAGCTGCAGAAATGTAAACGTCATTCACAGTACTGACAAAGATGTTGTGCAACATTCCCTCCAAGAGTACAGCATTACTCCTGCATTTGTAAACAGCAGCATCTGTATAAGAGATGTGAACAAGGCCACTGTGGCTGTCTCCCAGTGTCGCCCCTACAGCATAACAATTGACAGCAACCTATGCTGCAATACTGATGCTCAAAACGCAAACATTTTACCTGAAGTTGGCAACATTGATTCATCCACAGACTTGCCACTCCCACTAACCTCTCTCCATTCTTTGACACATCCACACCATGGATTAGATCTGCATTCAGTGATTAGTTTGACATCCTCACATGTTCATGAACAAGAAACTCATCATCATATTGAAATGGTTGGTAATCCTCCTGTGCCATACACTGAACCACTGTTTACAGATAACTGCAGTCAGATTTCTCAAGAAAACAGCAAGCAGAAAATGAGTCAGGATTCAGGCAGAGTGTACAGTAAGGTAGAAACATGA
- Protein Sequence
- MQFQAVQWEDHFDHLVTTLKDFMLLNILTDTTLVTGNLKVPVHRVIISCYSSYLKQLLTNEIQNCYILICDTEESLLQVLVSYIYTGVTSVPISSLNDWYKMSKLLRLDGVLEAARNDCSEDVAYFMWPRHEEMVLQYLWRSRSDPAECDVILVTDSLSQTFAHSCILGACSKHLLNIFLRHNERKKKKPYVLILQNVRSEDLEAVLEFCYRGTVSVFEGNISSIYDTAELLGVQNLCSKLISIDPMIKKMSEINGTNYIASNVISRIKACHFSSQQNEHALQLQNVFQHFFEYEDLVDITLLKGKQSFTAHIAVLSAFSMYFKNLTKCLQHNMKDAFVLVKDLQTQHVQAFLDYIYKGMAEFAGTAEVFCEVMSDWIDFSVLSIFESETCHLLTNATSVMKQKAEFTESLEEQNIFHSDDILCPNMQQEEILEKGETTQQGDCTESGQNSRNLENVIILEMSPITTEALEEVEPFEGSGDEKTIERPMKQDWKNLKNECQMNVEDDLADRSTVSDEDGAIEGADVEAAENRPHKRWRERDSVLTCYTCNESFESRKMLREHLIIHPNGRVMKCSYCGKGFDRPSQMELHIRIHTGSKPFSCKQCGHAFAAKSALRKHIDIHAKDKGKMFECAVCNKSFSRKEYLEEHIRTHTGNKPFECSICHKTFVGRTGLNHHRKTHADACEKKDSVCEVCGKSFTRHALWTHVKSHEKTHCCHHCNKCFSTASALRVHITGTHLGCRSYQCERCGKGFIQKNHLIRHMKVHDNTRDVPNTKPFLCGKCPRTFKTKTKLQSHARVEHIEPGDRPYSCEICNKRFAGRSTVIYHRRAHTGERPHGCSTCGKKFMRPDALRQHMMCHTGERRHQCSVCSRKFATRSTLNKHVESHKETTEKETSFSCDVCHKGFQSETQLLLHSRVHNSCRPLQCHVCHKSFRYQDSLTKHLNIHNVAQDDTPNNELSCIYSFQICGQTFELNSHTKETEDHSCRNVNVIHSTDKDVVQHSLQEYSITPAFVNSSICIRDVNKATVAVSQCRPYSITIDSNLCCNTDAQNANILPEVGNIDSSTDLPLPLTSLHSLTHPHHGLDLHSVISLTSSHVHEQETHHHIEMVGNPPVPYTEPLFTDNCSQISQENSKQKMSQDSGRVYSKVET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01289138; iTF_00370380; iTF_00370282;
- 90% Identity
- iTF_01289138;
- 80% Identity
- iTF_01289138;