Basic Information

Insect: Reticulitermes lucifugus
Gene Symbol: ttk
Assembly: GCA_026260175.1
Location: JAKCWW010009032.1:11223-17498[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00076 0.076 14.2 0.5 2 23 545 566 544 566 0.96

2 14 1.4e-06 0.00014 22.9 0.2 2 23 573 594 572 594 0.98

3 14 3.2e-05 0.0032 18.5 0.6 1 23 600 622 600 622 0.97

4 14 1.2e-07 1.2e-05 26.2 0.6 1 23 630 652 630 652 0.98

5 14 9e-05 0.009 17.1 4.8 1 23 658 680 658 680 0.98

6 14 0.0002 0.02 16.0 0.8 2 23 690 710 689 710 0.96

7 14 0.00053 0.053 14.7 9.7 1 23 714 737 714 737 0.92

8 14 2.1e-07 2.1e-05 25.4 1.9 1 23 743 765 743 765 0.99

9 14 4.7e-05 0.0046 18.0 1.1 1 23 777 800 777 800 0.94

10 14 0.00031 0.031 15.4 0.5 1 23 808 830 808 830 0.98

11 14 0.00034 0.034 15.3 1.8 3 21 838 856 837 858 0.96

12 14 4.7e-05 0.0047 18.0 2.7 1 23 864 886 864 886 0.97

13 14 0.0012 0.12 13.5 1.4 1 23 896 918 896 918 0.98

14 14 3.6e-06 0.00036 21.5 4.9 2 23 925 946 924 946 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00076	0.076	14.2	0.5	2	23	545	566	544	566	0.96
2	14	1.4e-06	0.00014	22.9	0.2	2	23	573	594	572	594	0.98
3	14	3.2e-05	0.0032	18.5	0.6	1	23	600	622	600	622	0.97
4	14	1.2e-07	1.2e-05	26.2	0.6	1	23	630	652	630	652	0.98
5	14	9e-05	0.009	17.1	4.8	1	23	658	680	658	680	0.98
6	14	0.0002	0.02	16.0	0.8	2	23	690	710	689	710	0.96
7	14	0.00053	0.053	14.7	9.7	1	23	714	737	714	737	0.92
8	14	2.1e-07	2.1e-05	25.4	1.9	1	23	743	765	743	765	0.99
9	14	4.7e-05	0.0046	18.0	1.1	1	23	777	800	777	800	0.94
10	14	0.00031	0.031	15.4	0.5	1	23	808	830	808	830	0.98
11	14	0.00034	0.034	15.3	1.8	3	21	838	856	837	858	0.96
12	14	4.7e-05	0.0047	18.0	2.7	1	23	864	886	864	886	0.97
13	14	0.0012	0.12	13.5	1.4	1	23	896	918	896	918	0.98
14	14	3.6e-06	0.00036	21.5	4.9	2	23	925	946	924	946	0.97

Sequence Information

Coding Sequence: ATGCAGTTTCAAGCCGTCCAATGGGAGGATCACTTTGATCACTTGGTGACAACACTGAAGGACTTTATGTTACTAAACATATTAACTGACACTACTCTTGTGACAGGAAATCTCAAAGTGCCAGTGCATCGGGTGATAATATCATGTTACAGTTCCTATCTAAAACAGTTACTGACTAATGAAATTCAAAACTGTTATATATTGATTTGTGACACTGAGGAATCACTTCTGCAAGTTCTTGTTAGTTACATCTATACTGGTGTAACTTCAGTTCCTATATCCAGTTTGAATGACTGGTACAAAATGTCCAAATTGCTGAGATTAGATGGTGTATTAGAGGCTGCCAGAAATGATTGTTCTGAAGACGTGGCTTATTTTATGTGGCCACGACACGAAGAAATGGTTCTCCAGTATCTTTGGCGATCTCGGTCTGATCCAGCAGAGTGTGATGTCATTTTAGTGACGGACAGTTTGTCACAGACTTTTGCACATTCTTGCATTTTGGGTGCATGCAGTAAACATTTGCTCAACATTTTCCTCAGGCATAATGAAAGGAAGAAAAAGAAGCCATATGTGTTGATTCTTCAGAATGTCAGAAGTGAAGATCTTGAGGCTGTTCTTGAGTTCTGTTACAGAGGAACTGTTTCTGTATTTGAAGGAAACATTAGTTCCATTTATGACACAGCTGAACTATTAGGCGTTCAGAATCTTTGTAGCAAACTGATTTCTATAGATCCTATGATCAAAAAAATGTCTGAAATAAATGGAACGAACTATATTGCATCAAATGTTATCAGTAGGATAAAGGCTTGTCATTTCTCGTCCCAACAGAATGAACATGCTCTGCAACTCCAAAATGTCTTCCAACACTTTTTTGAGTATGAAGACTTGGTTGATATAACATTACTCAAAGGCAAACAGAGCTTCACAGCTCACATTGCTGTATTAAGTGCTTTTAGCATGTACTTTAAAAACCTTACCAAATGTCTTCAACATAACATGAAAGATGCTTTTGTACTCGTCAAAGACTTGCAGACTCAGCATGTACAGGCTTTTCTAGATTATATATACAAAGGAATGGCAGAGTTTGCAGGGACTGCAGAGGTGTTTTGTGAGGTCATGTCAGACTGGATTGATTTCAGTGTGTTGTCAATTTTTGAGTCAGAAACATGTCATCTTCTAACTAATGCAACATCTGTAATGAAGCAGAAGGCAGAATTTACTGAATCACTGGAAGAACAGAACATTTTTCATTCTGATGACATTCTCTGCCCAAATATGCAACAAGAAGAAATTCTAGAGAAAGGTGAAACTACGCAGCAAGGAGATTGCACTGAAAGTGGACAAAATTCCAGAAACCTAGAGAATGTTATCATTTTGGAAATGTCTCCTATAACCACAGAAGCATTGGAAGAAGTGGAACCGTTTGAAGGGAGTGGAGATGAGAAAACAATTGAAAGACCTATGAAACAAGACTGGAAGAACTTGAAAAATGAGTGTCAAATGAATGTTGAGGATGACCTAGCAGACAGAAGCACAGTGTCAGATGAAGATGGAGCAATAGAAGGAGCAGATGTAGAGGCAGCAGAAAACAGACCGCATAAGAGATGGAGAGAAAGGGATTCTGTTTTAACATGTTATACATGTAATGAAAGTTTTGAATCACGGAAAATGCTGAGGGAGCATTTGATCATTCATCCAAATGGGAGAGTTATGAAGTGCAGTTACTGCGGGAAGGGATTTGATAGACCAAGTCAGATGGAACTTCATATTCGCATACATACAGGTTCTAAACCATTTTCTTGTAAACAGTGTGGCCATGCTTTTGCAGCAAAGAGTGCACTTCGGAAACACATTGATATTCATGCGAAGgataagggcaaaatgtttgagtgtgctgtatgtaacaagtcattttcaagaaaggaatacctggaggaacatatcaggacacatactggcaacaaaccatttgagtgttcgatatgccacaagacttttgttggccgcactggtctgaaccaccacaggaaaacgcatgCAGATGCCTGCGAGAAGAAAGATTCTGTGTGTGAAGTGTGTGGGAAGAGCTTCACACGCCACGCTCTGTGGACTCATGTCAAGTCACACGAAAAGACCCACTGCTGCCACCATTGCAACAAGTGCTTCTCTACTGCTTCTGCATTACGAGTTCATATAACAGGCACACACCTTGGATGCAGGAGTTATCAGTGTGAAAGATGTGGCAAAGGTTTCATACAAAAGAACCATCTGATCCGCCACATGAAGGTACATGACAACACAAGAGATGTGCCGAATACAAAGCCATTTCTGTGCGGAAAGTGCCCACGAACATTTAAAACCAAAACCAAACTTCAGTCACACGCACGGGTAGAACATATAGAACCAGGAGACCGTCCCTACTCTTGTGAGATCTGCAACAAACGGTTTGCAGGTCGCAGCACAGTTATCTACCATCGCCGCGCacacacaggtgaacgtccacatggttgttcaacttgtggcaagaaattcatgcgtccagatgctctgcgccaacacatgatgtgtcatactggtgagcgtcgacatcagtgctctgtttgtagcagaaagtttgcgACCAGAAGTACTCTGAACAAACATGTTGAATCGCATAAGGAAACAACTGAGAAAGAAACATCTTTCAGCTGTGATGTGTGTCATAAAGGTTTTCAGTCTGAAACACAGCTGTTATTACATTCTCGAGTGCATAACAGCTGTAGACCTTTACAGTGTCATGTCTGTCACAAATCATTCCGTTACCAGGACAGTCTAACAAAACATCTAAACATTCATAATGTTGCACAAGATGACACTCCTAATAATGAGTTATCATGCATATATTCTTTTCAAATTTGTGGACAGACATTTGAATTGAATAGCCATACCAAGGAAACTGAAGACCACAGCTGCAGAAATGTAAACGTCATTCACAGTACTGACAAAGATGTTGTGCAACATTCCCTCCAAGAGTACAGCATTACTCCTGCATTTGTAAACAGCAGCATCTGTATAAGAGATGTGAACAAGGCCACTGTGGCTGTCTCCCAGTGTCGCCCCTACAGCATAACAATTGACAGCAACCTATGCTGCAATACTGATGCTCAAAACGCAAACATTTTACCTGAAGTTGGCAACATTGATTCATCCACAGACTTGCCACTCCCACTAACCTCTCTCCATTCTTTGACACATCCACACCATGGATTAGATCTGCATTCAGTGATTAGTTTGACATCCTCACATGTTCATGAACAAGAAACTCATCATCATATTGAAATGGTTGGTAATCCTCCTGTGCCATACACTGAACCACTGTTTACAGATAACTGCAGTCAGATTTCTCAAGAAAACAGCAAGCAGAAAATGAGTCAGGATTCAGGCAGAGTGTACAGTAAGGTAGAAACATGA
Protein Sequence: MQFQAVQWEDHFDHLVTTLKDFMLLNILTDTTLVTGNLKVPVHRVIISCYSSYLKQLLTNEIQNCYILICDTEESLLQVLVSYIYTGVTSVPISSLNDWYKMSKLLRLDGVLEAARNDCSEDVAYFMWPRHEEMVLQYLWRSRSDPAECDVILVTDSLSQTFAHSCILGACSKHLLNIFLRHNERKKKKPYVLILQNVRSEDLEAVLEFCYRGTVSVFEGNISSIYDTAELLGVQNLCSKLISIDPMIKKMSEINGTNYIASNVISRIKACHFSSQQNEHALQLQNVFQHFFEYEDLVDITLLKGKQSFTAHIAVLSAFSMYFKNLTKCLQHNMKDAFVLVKDLQTQHVQAFLDYIYKGMAEFAGTAEVFCEVMSDWIDFSVLSIFESETCHLLTNATSVMKQKAEFTESLEEQNIFHSDDILCPNMQQEEILEKGETTQQGDCTESGQNSRNLENVIILEMSPITTEALEEVEPFEGSGDEKTIERPMKQDWKNLKNECQMNVEDDLADRSTVSDEDGAIEGADVEAAENRPHKRWRERDSVLTCYTCNESFESRKMLREHLIIHPNGRVMKCSYCGKGFDRPSQMELHIRIHTGSKPFSCKQCGHAFAAKSALRKHIDIHAKDKGKMFECAVCNKSFSRKEYLEEHIRTHTGNKPFECSICHKTFVGRTGLNHHRKTHADACEKKDSVCEVCGKSFTRHALWTHVKSHEKTHCCHHCNKCFSTASALRVHITGTHLGCRSYQCERCGKGFIQKNHLIRHMKVHDNTRDVPNTKPFLCGKCPRTFKTKTKLQSHARVEHIEPGDRPYSCEICNKRFAGRSTVIYHRRAHTGERPHGCSTCGKKFMRPDALRQHMMCHTGERRHQCSVCSRKFATRSTLNKHVESHKETTEKETSFSCDVCHKGFQSETQLLLHSRVHNSCRPLQCHVCHKSFRYQDSLTKHLNIHNVAQDDTPNNELSCIYSFQICGQTFELNSHTKETEDHSCRNVNVIHSTDKDVVQHSLQEYSITPAFVNSSICIRDVNKATVAVSQCRPYSITIDSNLCCNTDAQNANILPEVGNIDSSTDLPLPLTSLHSLTHPHHGLDLHSVISLTSSHVHEQETHHHIEMVGNPPVPYTEPLFTDNCSQISQENSKQKMSQDSGRVYSKVET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01289056;
90% Identity: iTF_01289056;
80% Identity: iTF_01289056;