Rluc007751.1
Basic Information
- Insect
- Reticulitermes lucifugus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_026260175.1
- Location
- JAKCWW010003243.1:32913-49532[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-114 1.9e-109 366.3 36.1 1 300 27 337 27 337 0.91 2 2 0.09 2.7e+03 -1.9 6.3 133 166 369 402 343 412 0.53
Sequence Information
- Coding Sequence
- ATGACACCTGCAGCCAGTCTGTCCTCATCAGAAGAAATAGCAAAAGGCTCACAGGTTCATCGAAGGTGGAATACTCGAGCCGAGGCTCGGCTAGCAGCAAGAAGACAAGCAAGAGCTGAAGCACGGGAAATTCGCATGCGGGAACTAGAAAGGCAACAGAAGGAAATAGAGGAGAATGCTGACAGTGTGTATGATATGTACAGAGATCCATCAGGTCGCTCTGCAAGAGTTGCTGCTACTGTCAGCAGCACGAGGAGCACTTCACTTGGAGGAACAAACAGTTATCAGTCAAGTCGCCGCAGTTCAGAGGATTCACTTGAGGAAGGCATTAGCCTCCGAGATGTGCGGCAAGAGCTGAAAGAGGTGGAAGAAAAGTTCCGAAAAGCAATGATACAGACCGCGCAGCTGGACAATGAGAAGTCATCACTCACATACCAAGTGGAACTGCTGAAAGATCGGCTGGAGGATCTGGAGGAGGCTCATTCGCAGTTACAACGTGAACACAGAGATAAATGTAGGGAGCATGACCAACTGAAGCGAATGACTGCAAAACTGAAGGAGGATCTCCAGATTTACAAAGCTGAACTGGAAGAGAGAGATCGTCTCATACAGGAACAAGGCCTTACGATAGTGGGAGATGATCAAGTATCCAGTGAAGAAGAGAGTAACACTGCAGAGGATGGTCATAGTAGTATGCCTAGACAGACACCAAGGAGAGTGCTTGTGTCAGTTGAGTCTGCAGAACTTTTGCAAACTGCTGGAGGAGGCTCGTTAGATGTCAGACTGCGGAAGTTTGCTGAAGAAAAAAATGAGCTTCAGGACCAGATACGGCATCTAAAATTAGAACTGGAGGAGGAGAGAAGTAGACACAAGTCAGACAGACAACGAGGGTCTAACAGTGTTAGTCTCAATGGGCCAGACACAGACCTGTTGGATATTCAGAGAGAAGCCAACAAACAACTGGGAGACTACAAGTTCAAACTTCAGAAAGCAGAACAAGATGTGTCAACATTGCAGGCCAGTGTGGCACGCTTAGAAAGTCAAGTTATAAGATACAAATCTGCGTCAGAGACGGCAGAGAAGGTTGAAGATGAACTTAAAGTGGAGAAGAGAAAATTGCAGAGGGAGCTGCGTGAATCACAGGCACGAGTGGAAGAACTGGAAACTTCCAATACACACTTGCAGCGGAGGCTTGACAAGTTGAAAAATGCCAAGTCTGCACTTCTTAAAGAACTTTGA
- Protein Sequence
- MTPAASLSSSEEIAKGSQVHRRWNTRAEARLAARRQARAEAREIRMRELERQQKEIEENADSVYDMYRDPSGRSARVAATVSSTRSTSLGGTNSYQSSRRSSEDSLEEGISLRDVRQELKEVEEKFRKAMIQTAQLDNEKSSLTYQVELLKDRLEDLEEAHSQLQREHRDKCREHDQLKRMTAKLKEDLQIYKAELEERDRLIQEQGLTIVGDDQVSSEEESNTAEDGHSSMPRQTPRRVLVSVESAELLQTAGGGSLDVRLRKFAEEKNELQDQIRHLKLELEEERSRHKSDRQRGSNSVSLNGPDTDLLDIQREANKQLGDYKFKLQKAEQDVSTLQASVARLESQVIRYKSASETAEKVEDELKVEKRKLQRELRESQARVEELETSNTHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00370223; iTF_00209817;
- 90% Identity
- -
- 80% Identity
- -