Basic Information

Gene Symbol
hang
Assembly
GCA_029041755.1
Location
JAQOWM010000253.1:414610-426740[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.0035 0.33 12.0 2.1 3 23 231 252 230 252 0.96
2 25 0.54 51 5.2 3.6 2 22 325 345 324 345 0.93
3 25 0.36 34 5.7 0.8 3 21 355 373 354 374 0.95
4 25 1.2 1.2e+02 4.0 0.7 3 23 415 436 413 436 0.91
5 25 1.7 1.6e+02 3.6 0.4 2 19 449 466 449 469 0.91
6 25 0.67 64 4.9 0.2 2 22 477 497 476 499 0.87
7 25 0.0004 0.038 15.0 0.8 3 23 539 560 537 560 0.95
8 25 0.00069 0.065 14.3 0.1 1 23 568 591 568 591 0.98
9 25 0.32 30 5.9 0.4 1 23 607 630 607 630 0.95
10 25 0.071 6.7 7.9 0.2 1 23 633 655 633 655 0.97
11 25 0.0011 0.1 13.7 1.8 1 23 661 684 661 684 0.96
12 25 0.00015 0.014 16.3 0.8 2 23 769 791 768 791 0.96
13 25 0.023 2.1 9.5 3.1 2 23 818 840 817 840 0.96
14 25 0.014 1.4 10.1 0.5 2 23 849 871 848 871 0.95
15 25 1.1e-05 0.001 20.0 2.0 1 23 910 933 910 933 0.97
16 25 0.00092 0.087 13.9 1.1 2 23 961 982 960 982 0.97
17 25 0.0015 0.14 13.2 1.1 2 23 991 1013 990 1013 0.96
18 25 5.2e-05 0.0049 17.8 1.0 2 23 1021 1042 1020 1042 0.97
19 25 0.0035 0.33 12.1 4.6 2 23 1079 1100 1078 1100 0.97
20 25 0.001 0.097 13.7 0.6 1 23 1147 1169 1147 1169 0.93
21 25 0.011 1 10.5 0.2 2 23 1205 1227 1205 1227 0.91
22 25 0.045 4.3 8.6 0.6 2 23 1250 1271 1249 1271 0.94
23 25 1.3e-05 0.0012 19.7 0.4 3 23 1285 1305 1285 1305 0.99
24 25 0.0001 0.0094 16.9 2.2 1 23 1406 1428 1406 1428 0.97
25 25 0.011 1 10.5 1.7 2 23 1530 1552 1529 1552 0.93

Sequence Information

Coding Sequence
ATGAGCGATGATGTATTAAAAAGAATAGCACGCAGTGGCGGATGTCGATTATGTCTCGCTCCCGATTCAGAATGTGTTCCAATTTTTGCAACAGCTGCGGCTGACAAGGAACcactttcaaataaaattctttcatGTGTTGGCATTAAGATATTGCCAGCGGATCGAATGTCAAATCGTGCTTGTCATGCGTGCATTAGTTTTCTAAATTCATGGCAAAGTTTCAAGAATCGTTGTTATGCCGCACAAAAGAAGCAACAAAATTTCCTCGATTTATTGTTAGCCAAAGAGCGGGCAAAGCAAAAACTTGAACAAGATCGACAACGCCAACTGCAACATGGCAAATCATCATTGGCCGATGATCAGcaaagaattttgaaaaatgcccTACTCAATTCCACAATGCGATCGAACACAATGAATAATTCAAGCATTGATATTAGTTTCATAAAAGAAGAACCAGAAGACATAAGCAGTGACATCGATGACATGGATAATGTTGATCCAACACAATTTCTCGCTCaggaaaatgatgatgatatggATACTGATGAACAACCGCCAATTTTGGCTTCACTTGGACTCACACACATCAGTCATAACACAGACAATGGAAATGATCATTTGGATGATCCATATGGTCAActgaatgtaaataatttagcAGCTGGAGGACGATCACAAGCCAATTGCACCATTTGTcatatgcaattttcaaatcgagCAAATGCACGTCGACATGAGCGAAACATTCACGGTATTCGAATATCAATGCAAGGTACACAGACAATTATTCAGGCAAAAGATAGACCCGAGATCTCAATAACAGCaccaatgaaattgaaacgaCCAATTGATGCGCCAGCAGTTTATGATTATACAAAACCTGAACTCTATCGAACCTATTTAACTGAACCACGAGTAAATTTCATTCGACGTCACATGGAATTTTTGGAACAATATCAAACAATGACCTGCAAATGTTGCAACAAACAATTTCCCACCTATAAATTTTTCATGGCACACATGCGCAAAAAGTATGATACACTATCACGAAATTTATGctttaaatgtttgaaacaATTCCAAACGAAACCACAATTTATTGCCCATTTGAAGAAACGCAACTGTTTGAATTTGTATCGTGTATTTATGGCAGATGATACAATTACAAAAGAACCATTACCAAATGCACCGATACGTCATGGATCAAAGGAAATTATCGCCAATAAAACGTATGGTTGTCGCTTGTGCACCGATACATTTAGACTAAAATCCGATTTCCGTACGCATGTTATTGAAACGCATAGCGATGCACAGAAACGCGAAGTGGCTGGCAGCAATTCATGCGGATATTGTAATATGGAATTTGAAGATACTAACGAACGTCGACGACATTTTAGTAATGTTGAGTGTATGGTATTTTTGGTATGCGGAACATgcgaagaaaaattcaattcacatcCTGAATACATTGAACATGTTTATGCAACGCATATACCATCAGCCAATGCAACgccaattaaaaatgaatttttattggaCGATGAAAATGGTTTGCTTGCCGAAGATCCAACACCATCAACACAATCCAAAGCTCGAAGTCCGCAAAATTGTACGGTTTGCGGTAAacaatataataattattacaaTGTATTACGTCACATGGAATCAAAGCATCCCGATCAAGTACCAACAACGTATCGTTGTGATCGATGTGAAATTGGTTATCCACGTCAAGTTGAATTACGTGAACATATGCTTCGTGTACATAATGAGCGCCTCAAATTTGATGCTATTAAAATGAAACGTGAACAATTTACATGCCGTGAATGCAAATCATTATTTGATAGCAAAGACGCTTGGTTAACACATCAAATGGATGAACATTCAAAgttttattgcaataaatgCGATGAAGAAACTGATATAAAGGAAGATTTTTTGACACATATTGCCTCACATTCAGATGccaaatcatttaaatgccCATTTTGTCAACATTCATTCAGTTCAGAACGTGGATTTGAAACTCATTTATCGGTCGTTCATAATATGACAAAAGAAGAAGTGATCGAAAATAGTAATCTTGATAATagtgatttcaatgaattaccAGTCGAATGTGCTGTTGAAATAAATGGTGAAGATGATACGGATAACGAAGATATGAACGATGCTGATGATTTGGATGGCAATgatgttgatattgatgaaacaCTTGAAGCACCAAATAAACGTATTAAACTTGATACGgatgcaaatgaaacaaatttatcaaataatgaaaattcattgagcACAACGTGTCGCGTTTGTAAGGAATCATTTGCAACGCGAGTTTTATTGATGCAACACATGCGAAATTCACATAGTTCAGTATCAAAATTGCCATCATTAATTGCTTCACCACATATGACCGTCCAAACGCATAATGTCAATAATCGGCTACGTTGTCGTATTTGCCAAAAACGAATTCACACCAAAAATGGATATAAACGTCATATGCTCACCGTACACAATGTCAAGGattgtgtttttattaaatgcacACTTTGCCCATCAGAATTCAGCAATGATAAAGGCTTAAAAGTTCATATGTTCCGGACACACAATATTACCGTGCAACAAATGCAAGCCGATGAAAGTTTGGTACCAATTCCAAAACAAGAATCAACATCACCAACACCAACTCCGGTTGTGCCAAGAACcgattcaaaacaaatgtttgaatgtaACATTTGCCATACGGTATTCCGCAGTCGTGATCTATTGAAGTCACATCGCAAAATTGTGCACAGCCTTAATGACAgTTTGAATGAATCGGACTTGCTGGAACCAATGAACGAAGAAGGTCCCTATACTGGTGAATCATGGTGGCAGTGTCGTTTCTGCAATGAATCATTCAATGCAAGCAAAAAATTGACCATTCATATGAACAGCCACAGTGAATATGacaacaaagaaacaaaatgcaaagaTTGTGGAAATGTTTATGGAACACGTAAATCACTTTGGGTGCATCGTCAAAAGAAACATCCACGATTGCCAAATCCATCGCCATGTGAATTATGCGATAAAACATTCTTTGATAAAACTGAactattttatcatttaaaaacacattcaaatgatgatgtttTCTCACATTTGCAAGCAATGCAAGAGCAACTTGAAGCCGAACAAGAAAGCCGTCAAAAGCAAGAACAATCGAATGATGGTCAAGAAAATTTATCGTGTCATATTTGCAATCAACGTTTCCATGATAAGCGTGTACTTAGCAAACATCTTCGTGTGCATGAACAAAAGCAaagtgaaaattcatttagtaATTCAGCCCTTGCGGCCATGTTGGCTGATACAAATATTAGTACAGATGAAAATCTTGGTGAATACAGTTATCCAACGTACAAAGGTCAAATGGTTGAAAATGGTGAATTTGCATGTGATATGTGTCCAAAGAAATTTTCGCATGTAAATGCATTGAAAGTGCATCGTGGTTGGCATTTCCGTTCACCGGATGGTCGACAAATTACCGACAGCAATAGCATTTGGCGTCCAGATGTTGgcagcaataataaaaataaacgttCACGAGCTGCAAATCCACCCGTTTGCCCATTTTGTAAATCAACATTTGCCAGTGGAAATAATTTACGGCGTCACATTGTTGAAGTGCATAAACGAAACGAAGCGAAAATGATGCGCGAAAATGGCACCGaaacaacatttattgaaaaagaatgtGAATGTCAATCATGCGGTATTACATTTAATACACGACCAGAATGGGTTGAACATAAAATATCACATGCACGTACAATGAAACCATCGACCACCTACGAATGGGGATGTGAAATTTGCGGTAAAGTGTTTACACGCAAAGAACGTTTACTTGTTCATATGACATCGCATATGAATGGTGGCGAAGATGAGATTAATCAACGAAAAGCCGAAATGGGTTTTGAAAGTAATTCACAAAGTTCGATGTCATCATTatcacaacaacaatcacaaGAGGCAAATAGCGTACGAAAAACGTACAACAATCCAAAATCAGTGTCATTGTTAAAACAACCATCGTTGTTAAAACAATCATTACAAGGTGATTCAGTGCAGTATGAAGAGAAACCAATAATCAAGTCCGAATCGGTTGCATCACTCGATTTAGATGAAGAACATTCAGAATCGAATGAACCAGAGGATGAACAAAGTCATTCATGTGATTTATGCGATCTATTTTTCAAGAGTGCCAAGGAACTTCGACAGCATATTAAAAGCCACATTGAATCGATTGGTGGTCAAGCTGATGAATCAAATATGGATGATGAACATTACGATGATGGTGATGGCAGTGATATAGAGGATCAGTATGAAGTTGAGGAAGGTGTCGATGAAGAAATTGGCGAAGAAGAAATGGGCGACATGGTCGAAGAAGATTTCGAAGATGATGTTGACGAAGACGAGCCCGTCGAAGAGCGAACACCCGAAGTAACCGGTTTCAATTGTCGGCTGTGTGGATCAAGTAGCGAGTCACACATTGATATGATCAAATGTATGGAAAGCCATAAAGTAAAAACGAATATACAATGTGAACAATGTCAATTATATTTCACGAACAACAATCAATTAGAGACTCACGAAATGCTTTGCCATCCGCAAGAGGATTTTGATGAAGATAGTGATTAA
Protein Sequence
MSDDVLKRIARSGGCRLCLAPDSECVPIFATAAADKEPLSNKILSCVGIKILPADRMSNRACHACISFLNSWQSFKNRCYAAQKKQQNFLDLLLAKERAKQKLEQDRQRQLQHGKSSLADDQQRILKNALLNSTMRSNTMNNSSIDISFIKEEPEDISSDIDDMDNVDPTQFLAQENDDDMDTDEQPPILASLGLTHISHNTDNGNDHLDDPYGQLNVNNLAAGGRSQANCTICHMQFSNRANARRHERNIHGIRISMQGTQTIIQAKDRPEISITAPMKLKRPIDAPAVYDYTKPELYRTYLTEPRVNFIRRHMEFLEQYQTMTCKCCNKQFPTYKFFMAHMRKKYDTLSRNLCFKCLKQFQTKPQFIAHLKKRNCLNLYRVFMADDTITKEPLPNAPIRHGSKEIIANKTYGCRLCTDTFRLKSDFRTHVIETHSDAQKREVAGSNSCGYCNMEFEDTNERRRHFSNVECMVFLVCGTCEEKFNSHPEYIEHVYATHIPSANATPIKNEFLLDDENGLLAEDPTPSTQSKARSPQNCTVCGKQYNNYYNVLRHMESKHPDQVPTTYRCDRCEIGYPRQVELREHMLRVHNERLKFDAIKMKREQFTCRECKSLFDSKDAWLTHQMDEHSKFYCNKCDEETDIKEDFLTHIASHSDAKSFKCPFCQHSFSSERGFETHLSVVHNMTKEEVIENSNLDNSDFNELPVECAVEINGEDDTDNEDMNDADDLDGNDVDIDETLEAPNKRIKLDTDANETNLSNNENSLSTTCRVCKESFATRVLLMQHMRNSHSSVSKLPSLIASPHMTVQTHNVNNRLRCRICQKRIHTKNGYKRHMLTVHNVKDCVFIKCTLCPSEFSNDKGLKVHMFRTHNITVQQMQADESLVPIPKQESTSPTPTPVVPRTDSKQMFECNICHTVFRSRDLLKSHRKIVHSLNDSLNESDLLEPMNEEGPYTGESWWQCRFCNESFNASKKLTIHMNSHSEYDNKETKCKDCGNVYGTRKSLWVHRQKKHPRLPNPSPCELCDKTFFDKTELFYHLKTHSNDDVFSHLQAMQEQLEAEQESRQKQEQSNDGQENLSCHICNQRFHDKRVLSKHLRVHEQKQSENSFSNSALAAMLADTNISTDENLGEYSYPTYKGQMVENGEFACDMCPKKFSHVNALKVHRGWHFRSPDGRQITDSNSIWRPDVGSNNKNKRSRAANPPVCPFCKSTFASGNNLRRHIVEVHKRNEAKMMRENGTETTFIEKECECQSCGITFNTRPEWVEHKISHARTMKPSTTYEWGCEICGKVFTRKERLLVHMTSHMNGGEDEINQRKAEMGFESNSQSSMSSLSQQQSQEANSVRKTYNNPKSVSLLKQPSLLKQSLQGDSVQYEEKPIIKSESVASLDLDEEHSESNEPEDEQSHSCDLCDLFFKSAKELRQHIKSHIESIGGQADESNMDDEHYDDGDGSDIEDQYEVEEGVDEEIGEEEMGDMVEEDFEDDVDEDEPVEERTPEVTGFNCRLCGSSSESHIDMIKCMESHKVKTNIQCEQCQLYFTNNNQLETHEMLCHPQEDFDEDSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
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