Basic Information

Insect: Sitodiplosis mosellana
Gene Symbol: hang
Assembly: GCA_009176505.1
Location: VUAH01000029.1:2337832-2351292[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0032 0.19 12.4 2.1 2 23 233 255 233 255 0.95

2 25 0.62 37 5.2 3.6 2 22 327 347 326 347 0.93

3 25 0.41 25 5.7 0.8 3 21 357 375 356 376 0.95

4 25 0.072 4.3 8.1 0.7 3 22 417 436 415 438 0.89

5 25 1.8 1.1e+02 3.7 0.2 3 19 452 468 451 471 0.93

6 25 0.55 33 5.3 0.2 2 23 479 501 478 501 0.88

7 25 0.00046 0.028 15.0 0.8 3 23 541 562 539 562 0.95

8 25 0.0008 0.048 14.3 0.1 1 23 570 593 570 593 0.98

9 25 0.041 2.4 8.9 0.2 1 23 609 632 609 632 0.91

10 25 0.12 7.1 7.4 0.2 3 23 637 657 635 657 0.98

11 25 0.00038 0.023 15.3 1.0 1 23 663 686 663 686 0.96

12 25 9.5e-05 0.0057 17.2 1.7 2 23 772 794 771 794 0.96

13 25 0.1 6.1 7.6 2.3 2 23 821 843 820 843 0.93

14 25 0.017 0.99 10.1 0.5 2 23 852 874 851 874 0.95

15 25 4.2e-05 0.0025 18.3 1.8 1 23 913 936 913 936 0.96

16 25 0.0011 0.064 13.9 1.1 2 23 965 986 964 986 0.97

17 25 0.0017 0.1 13.2 1.1 2 23 995 1017 994 1017 0.96

18 25 6e-05 0.0036 17.8 1.0 2 23 1025 1046 1024 1046 0.97

19 25 0.0089 0.53 11.0 4.9 2 23 1083 1104 1082 1104 0.97

20 25 0.0012 0.071 13.7 0.6 1 23 1151 1173 1151 1173 0.93

21 25 0.0017 0.1 13.2 0.1 2 23 1209 1231 1209 1231 0.91

22 25 0.052 3.1 8.5 0.6 2 23 1254 1275 1253 1275 0.94

23 25 1.5e-05 0.00087 19.7 0.4 3 23 1289 1309 1289 1309 0.99

24 25 0.0007 0.042 14.4 1.8 1 23 1408 1430 1408 1430 0.98

25 25 0.021 1.3 9.8 2.3 2 23 1543 1565 1542 1565 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0032	0.19	12.4	2.1	2	23	233	255	233	255	0.95
2	25	0.62	37	5.2	3.6	2	22	327	347	326	347	0.93
3	25	0.41	25	5.7	0.8	3	21	357	375	356	376	0.95
4	25	0.072	4.3	8.1	0.7	3	22	417	436	415	438	0.89
5	25	1.8	1.1e+02	3.7	0.2	3	19	452	468	451	471	0.93
6	25	0.55	33	5.3	0.2	2	23	479	501	478	501	0.88
7	25	0.00046	0.028	15.0	0.8	3	23	541	562	539	562	0.95
8	25	0.0008	0.048	14.3	0.1	1	23	570	593	570	593	0.98
9	25	0.041	2.4	8.9	0.2	1	23	609	632	609	632	0.91
10	25	0.12	7.1	7.4	0.2	3	23	637	657	635	657	0.98
11	25	0.00038	0.023	15.3	1.0	1	23	663	686	663	686	0.96
12	25	9.5e-05	0.0057	17.2	1.7	2	23	772	794	771	794	0.96
13	25	0.1	6.1	7.6	2.3	2	23	821	843	820	843	0.93
14	25	0.017	0.99	10.1	0.5	2	23	852	874	851	874	0.95
15	25	4.2e-05	0.0025	18.3	1.8	1	23	913	936	913	936	0.96
16	25	0.0011	0.064	13.9	1.1	2	23	965	986	964	986	0.97
17	25	0.0017	0.1	13.2	1.1	2	23	995	1017	994	1017	0.96
18	25	6e-05	0.0036	17.8	1.0	2	23	1025	1046	1024	1046	0.97
19	25	0.0089	0.53	11.0	4.9	2	23	1083	1104	1082	1104	0.97
20	25	0.0012	0.071	13.7	0.6	1	23	1151	1173	1151	1173	0.93
21	25	0.0017	0.1	13.2	0.1	2	23	1209	1231	1209	1231	0.91
22	25	0.052	3.1	8.5	0.6	2	23	1254	1275	1253	1275	0.94
23	25	1.5e-05	0.00087	19.7	0.4	3	23	1289	1309	1289	1309	0.99
24	25	0.0007	0.042	14.4	1.8	1	23	1408	1430	1408	1430	0.98
25	25	0.021	1.3	9.8	2.3	2	23	1543	1565	1542	1565	0.93

Sequence Information

Coding Sequence: ATGACCGATGATGTATTGAAGAGAATAGCTCGCAGTGGCGGATGTCGATTATGTCTCGCTCCCGATTCGGAATGTGTTCCCATTTTTGCGACAGCTGCTGCTGACAAGGAGCCACtctcaaataaaattctttcATGTGTCAGCATTAAGATACTGCCAGCGGATCGGATGTCAAATCGAGTATGCCATGCGTGCATCAGTTTTCTAAATTCATGGCAAAGTTTCAAGAATCGTTGCTATGCCGCACagaagaagcaacaaaattTCATCGATCTATTGTTGGCCAAAGAGCGTGCAAAGCAAAAAGCCGAAAATGACCGTAAGCGCCAACTGCAACCAGGCAAGGTAGCACCGGTCGCCATCGTCGACGACCAGCAAAGAATCCTGAAAAACGCTTTACTTAATTCCACAATGCGATCGAACGCAGTGAACAACTCATCTATCGATGTTAGCTTCATCAAAGAAGAACCAGAAGATATAACAAGCGATATCGATGATATGGACAATATGGATCCGACACAATTCTTAGCTCAGGAAAACGACGAAGAGCTGGAAAATGATGAGCATCCACCGATTTTAGCGTCTCTTGGGCTCACACACATCAATCACCAAAACACAGACAATGGCACTGATCAAATGGATGATTCACTTGGTCAGCAGAAtgtaaataattcaataacAGGACGATCGCAAGCCAGCTGCACCATTTGTCACATGCAATTCTCAAATCGAGCGAATGCACGTCGACACGAGCGAAATATTCACGGCATTCGGATATCGTTACAGGGCTCAAACACAGTTCAGCCAAAAGATAAGCTAGAGATCTCAATAGCTGCACCCATTAAATTGAAGCGCCCGCTTGATGTACCAACCATTTACGATTACACCAAACCCGAACAGTTCCGACACTTTTTGACCGAGCCACGGTTGAATTTCATTCGGCGTCATCTGGAATTTCTGGAACAGTATCAAACGATGACTTGCAAGTGCTGCAACAAACAATTTCCCacatacaaatttttcatgGCACACATGCGCAAAAAGTATGATACGCTATCGCGAAATTTGTGCTTCAAGTGCTTGAAACAATTCCAGACGAAGCCACAATTTATTGCACATTTGAAGAAACGAAACTGCTTGAATTTGTATCGCGTATTTATGGCCGATGACACCATATTAAAAGAACCATTGCCAAATGCACCGATTCGATATGGATCGAAGGAAATTATTGCGAATAAAACGTATGGCTGTCGCTTGTGCACCGAAACATTTAGGCTAAAATCGGATTTTCGCACGCATGTGGTTGAAACACACAGCGATGCACAGAAACGTGAAGTTGCCGGCAGCAATGCATGCGGCTATTGCAGCACCGAATTCGAAGATGCCAACGAACGTCGTCGTCATTTCAGCAATGTTGAGTGTATGGTATTCTTGGTGTGCGGAACGTGTGAAGAGAAATTCAATACGCATCCCGAATACATTGAACACGTTTATGCAACCCATATTGCAACGGCAAATGAAACtccaattaaaaatgaatttttgttggaaGACGAGAATGGTTTGCTGGTCGAGGATCCAACGCCATCGTCACAATCGAAAGCAAGAAGTCCGCAAAATTGCACCGTCTGTGGTAAACAGTATAATAATTACTATAACGTTTTGCGCCATATGGAATCGAAGCATCCCGATCAAGTGCCAACTACATATCGCTGTGATCGCTGTGAGATTGGATACCCTCGGCAAGTTGAATTGCGTGAGCACATGCTTCGTGTGCACAATGAGCGCCTTAAATTCGATGCCATCAAGCAGAAACGTGAACAGTTCACATGTCGTGAATGCAAAGCCGCATTCGACAGCAAAGACACATGGGTGACACATCAAGGGGAAGAGCATTTCAAATTCGGTTGCAACCAATGCGATGAGGAAGTCGAAAAGAAGGAAGACTTTTTGACACATCTTGCAACACACTCGGAAGCAAAGTCATTCAAATGTCCGGTTTGCCAGCATTCGTTCAGCTCGGAACGTGGATTTGAAACACATTTGTCGGTCGTTCACAATATGACCAAAGAAGAAGTGGCCGATAATAATTTGGAGAGCAGTGATTTCGGTGAACTTCCGGTCGAATGTGCTGTGGAAATAAATGGTGAAGACGAGTCAGACAACGAGAACATGCACGATGGTGGTGAAGATTTGGATGGTAACGATGCGGATATCGATGAAACACTTGAACCTCCGGCCAAACGAATTAAACTTGAGACCacgattgaaaatgatttgaattcgTCGAACAATGAGATTTCGTTGAGCACAACATGCCGCATTTGCAAAGAAACATTCACTTCAAGGGCATTTTTAATGCAACACATGCGAAGTTCGCATAGCTCAGTTCCGAAACTGCCATCGCTCACCGCTTCACCTCATGTCACCGTCCAAACACATAACGTCAACAATCGGCTACGCTGTCGCATCTGCCAGAAACGTATtcacaccaaaaatggttACAAACGTCACATGCTCGACGTGCACAATGTGAAGGATTGCGTATTCATAAAGTGTACGTTGTGTCCATCGGAATTCAGCAATGATAAGGGTTTGAAAGTGCACATGTTTCGAACACACAACATAACCGTGCAGCAAATGCAAGCCGACGAAAGTTTGGTGCCAATCCCAAAACAAGAATCCACTTCACCGACACTAACTCCAGTTGTGCCGAAAACGGAACCAaagcaaatgtttgaatgcaaCATATGTCACACAGTTTATCGTAATCGAGATCAATTAAAATCACATCGAAGCATCGTGCATAAGATAAATGACAGTGACTTGAACGAAACAAATCTACTAGAGACAATGGCCGAGGAGAATACGTATTCGGGCGAATCGTGGTGGCAATGCCGATTCTGCAACGAATCATTCAACGCAAGCAAAAAGTTGACCATTCACATGAACAGCCACAGCGAATACGATAACAAAGAAACCAAATGCAAGGATTGTGGAAATGTGTACGGAACGCGTAAATCACTTTGGGTGCATCGTCAAAAGAAACATCCTCGATTGCCAAATCCATCGCCGTGTGAACTGTGCGATAAGACATTCTTTGATAAAACGGAACTTTTCTATCATTTGAAGACTCATTCAAACGACGATGTATTCTCGCACTTGCAAGCGATGCAAGAGCAGTTGGAGGCCGAACAAGAGAGTCGTCAAAAGCAAGAGCAAGCCGGTGAAGGTCAAGAGAATCTTTCGTGCCATATTTGCAATCAACAATTCCATGATAAACGTGTGCTCAGCAAACATCTTCGTATGCATgagcaaaagcaaaatgaaagcTCATTCAATAATTCGGCACTCGCAGCAATGCTGGCCGACACAAATATCAGTACCGATGAAAATCTTGGCGAATACAGTTACCCATCGTACAAAGGCCAAATGGTTGAGAACGGTGAATTTGCGTGCGACATGTGTCCAAAGAAATTTTCACATGTTAATGCGTTGAAAGTTCATCGTGGTTGGCATTTCCGTTCGCCCGACGGACGTCAAATCACTGACAGCAATAGCATTTGGCGTCCAGACGTGGGTAGTAACAACAGAAATAAACGCTCCAGAGCATCCAATCCACCCGTTTGCCCGTATTGCAATTCAACATTTGCCAGCGGCAACAATTTGCGTCGTCACATTGTCGAGGTGCATAAACGAAACGAGGCAAAGCTGATGCGCGAAAATGGTATCGAAACAACATTCATCGAAAAAGAATGTGAATGTCAGTCTTGCGGTATAACATTTAACACGCGACCAGAATGGGTGGAACACAAGATATCGCATGCTCGAACAATGAAACCATCGACCACCTATGAATGGGGCTGTGAGATTTGTGGCAAAGTGTTCACTCGCAAAGAACGGTTACTGGTTCACATGACATCGCATATGAATGGTGGCGAAGAAGAGATCGCACAGAGAAAGGCAGAAATGGGATTTGAGAGCAATTCGCAGAGTTCGATGTCTTCGTTGTCACAGCTAGATAGCGTTCGCAAGTATGAAAGTAAATCATTGCTCAAGCAGCCGTCTCTTCTCAAGCAATCATTACAAGGAAAGCCATCGCAGTCAGCAGAGAATGATGACGGAAAGTTGCATAAGGCAGACTCAGATGGATCGATGGATTTGGATGGAGAAGAACCATCGAATTTTAATGAGCaggatgatgaagaagaagagcaaaGCTATTCATGCGATTTGTGCGATCAAGAATGCAAGAGTGCCAAGGAACTGCGACAGCATGTTAAGAGCCACATTGAGTCGATTGGCGGGCAAGCCGAGGAATCAAACATAGACGATGAACAGTACGACGACGGTGATGGCAGCGAAGTGGCTGAAAATGACGATGGAATTGAGGATCATTATGAAGTCGACGACGGTATCGACGAAGAAATGGGTGAAGAGGAAATGGTTGAGGAGGGTGACATGGTTGAAGAGGATTTCGAAGACGATGAAGTTGACGAAGGCGAACCCGCCGAAGAACGAACAGCCAATGTAACCGGTTTCAATTGTAGGCTTTGTGGATCGAGCAGCGCATCACACATCGATATGATCAAATGCATGGAAGGCCACAAAGTGAAAACGAGTACACAATGCGAACAATGTCAATTATATTTCACGAACAACAATCAATTAGAAACCCACGAGATGCTTTGCCATCCGCAAGAGGACTTCGATGAAGATAGTGATTAA
Protein Sequence: MTDDVLKRIARSGGCRLCLAPDSECVPIFATAAADKEPLSNKILSCVSIKILPADRMSNRVCHACISFLNSWQSFKNRCYAAQKKQQNFIDLLLAKERAKQKAENDRKRQLQPGKVAPVAIVDDQQRILKNALLNSTMRSNAVNNSSIDVSFIKEEPEDITSDIDDMDNMDPTQFLAQENDEELENDEHPPILASLGLTHINHQNTDNGTDQMDDSLGQQNVNNSITGRSQASCTICHMQFSNRANARRHERNIHGIRISLQGSNTVQPKDKLEISIAAPIKLKRPLDVPTIYDYTKPEQFRHFLTEPRLNFIRRHLEFLEQYQTMTCKCCNKQFPTYKFFMAHMRKKYDTLSRNLCFKCLKQFQTKPQFIAHLKKRNCLNLYRVFMADDTILKEPLPNAPIRYGSKEIIANKTYGCRLCTETFRLKSDFRTHVVETHSDAQKREVAGSNACGYCSTEFEDANERRRHFSNVECMVFLVCGTCEEKFNTHPEYIEHVYATHIATANETPIKNEFLLEDENGLLVEDPTPSSQSKARSPQNCTVCGKQYNNYYNVLRHMESKHPDQVPTTYRCDRCEIGYPRQVELREHMLRVHNERLKFDAIKQKREQFTCRECKAAFDSKDTWVTHQGEEHFKFGCNQCDEEVEKKEDFLTHLATHSEAKSFKCPVCQHSFSSERGFETHLSVVHNMTKEEVADNNLESSDFGELPVECAVEINGEDESDNENMHDGGEDLDGNDADIDETLEPPAKRIKLETTIENDLNSSNNEISLSTTCRICKETFTSRAFLMQHMRSSHSSVPKLPSLTASPHVTVQTHNVNNRLRCRICQKRIHTKNGYKRHMLDVHNVKDCVFIKCTLCPSEFSNDKGLKVHMFRTHNITVQQMQADESLVPIPKQESTSPTLTPVVPKTEPKQMFECNICHTVYRNRDQLKSHRSIVHKINDSDLNETNLLETMAEENTYSGESWWQCRFCNESFNASKKLTIHMNSHSEYDNKETKCKDCGNVYGTRKSLWVHRQKKHPRLPNPSPCELCDKTFFDKTELFYHLKTHSNDDVFSHLQAMQEQLEAEQESRQKQEQAGEGQENLSCHICNQQFHDKRVLSKHLRMHEQKQNESSFNNSALAAMLADTNISTDENLGEYSYPSYKGQMVENGEFACDMCPKKFSHVNALKVHRGWHFRSPDGRQITDSNSIWRPDVGSNNRNKRSRASNPPVCPYCNSTFASGNNLRRHIVEVHKRNEAKLMRENGIETTFIEKECECQSCGITFNTRPEWVEHKISHARTMKPSTTYEWGCEICGKVFTRKERLLVHMTSHMNGGEEEIAQRKAEMGFESNSQSSMSSLSQLDSVRKYESKSLLKQPSLLKQSLQGKPSQSAENDDGKLHKADSDGSMDLDGEEPSNFNEQDDEEEEQSYSCDLCDQECKSAKELRQHVKSHIESIGGQAEESNIDDEQYDDGDGSEVAENDDGIEDHYEVDDGIDEEMGEEEMVEEGDMVEEDFEDDEVDEGEPAEERTANVTGFNCRLCGSSSASHIDMIKCMEGHKVKTSTQCEQCQLYFTNNNQLETHEMLCHPQEDFDEDSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01288415;
90% Identity: -
80% Identity: -