Basic Information

Insect: Pyrausta purpuralis
Gene Symbol: -
Assembly: GCA_963924145.1
Location: OZ001670.1:2942373-2944265[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00046 32 6.6 0.1 26 48 99 121 96 126 0.91

2 11 0.073 5.1e+03 -0.4 0.1 23 35 126 138 121 151 0.74

3 11 0.056 3.9e+03 -0.1 0.0 22 46 184 208 180 211 0.83

4 11 0.0043 3e+02 3.5 0.0 23 48 214 239 207 242 0.89

5 11 0.0061 4.2e+02 3.0 0.1 27 51 248 272 246 274 0.93

6 11 3.4e-05 2.3 10.3 0.1 25 48 274 297 272 300 0.89

7 11 0.053 3.7e+03 0.0 0.1 25 48 342 365 333 366 0.77

8 11 6e-09 0.00042 22.3 0.1 20 48 365 393 362 400 0.93

9 11 0.063 4.3e+03 -0.2 0.2 24 48 399 423 393 427 0.84

10 11 0.24 1.7e+04 -2.1 0.1 27 48 458 479 449 482 0.82

11 11 0.26 1.8e+04 -2.2 0.0 26 44 543 561 537 563 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00046	32	6.6	0.1	26	48	99	121	96	126	0.91
2	11	0.073	5.1e+03	-0.4	0.1	23	35	126	138	121	151	0.74
3	11	0.056	3.9e+03	-0.1	0.0	22	46	184	208	180	211	0.83
4	11	0.0043	3e+02	3.5	0.0	23	48	214	239	207	242	0.89
5	11	0.0061	4.2e+02	3.0	0.1	27	51	248	272	246	274	0.93
6	11	3.4e-05	2.3	10.3	0.1	25	48	274	297	272	300	0.89
7	11	0.053	3.7e+03	0.0	0.1	25	48	342	365	333	366	0.77
8	11	6e-09	0.00042	22.3	0.1	20	48	365	393	362	400	0.93
9	11	0.063	4.3e+03	-0.2	0.2	24	48	399	423	393	427	0.84
10	11	0.24	1.7e+04	-2.1	0.1	27	48	458	479	449	482	0.82
11	11	0.26	1.8e+04	-2.2	0.0	26	44	543	561	537	563	0.86

Sequence Information

Coding Sequence: atggaCACTAATCCAGAacaaatttttgtcaaaccagAAATAAACATAGAAGTTGAAATCCAGCCACTCAATGAAGTCACAACTGAACGTATAGATATAAAAACAGAACCATTAGATGTTAATTCTGAAGGCAAAGCGGTAGACAATTTGGTCATCAAACCAGAACTACcattacaatattttgatgacttcCAAAGGTCACAGGAAGAGGAGTCATCATCCACTGAAGTCAGACCAAAAAGATCGATAGAAATTGAAGGAAAAGTGTATAAGAAtggaaaaataaatagattgcAGTGTCCTCAATGTagtaatacatttaaaaatcgaGCAAATCTTAGGTCACACTTAAAATTTGTACATTCCACAGATGATGACGCAGTTGATTGCGATATATGTTACAGAACATTCAAATCACTACTCCATTTGTATTCACATAAGAGTTCTGTGCATGCTGGAGAAATGCAAGTGAATTGTGATTACTGTGACAAAACGTttgcaaataaaaagaaattaaacaaCCACATATTTTACTGCCATCCAGACACAGAGGAAGATGTTAACTGTGAAGTTTGTGCAAAGGTTTTCAAATCTAAGTACCGTTTAAAAGTTCATATGAAGCAGGTGCATCCGGAAGGACAAACTGTTAACTGTCCAGATTGTAATAAAGAATTCAAGAATAGTATGTTACTGCAGCGACACATAAAATGGGCACACCCGACTGATGGATTAATATACCGTTGTCCAGAATGCAACAGGGTTTTACCTTCAATAGATGGATACCGACGTCATATGAAAGCAGTGCATGGCGCCAAAAAGGTTACATGTGAAGTATGCTACAAAGTCCTTAAGACTAATGGCAGTTTGAATCGCCATATGGCAACAGTACACAGTTCAGTCAAAACTGAaagaaaaaagtataaaactgGGGATTTACAATGCAGTGAATGCGataaaaaatttacaacaaatacAGCTTTGCTCTGGCATTATGAAAAGTTTCATTCAGAAAATAAACTGGAAACCTCATGCCATGCTTGCGCTAAAGAGTTCTGTGATCAAAACAGTTTGAAGCGTCACATGGAAACGGTACATTCTGAACAAAGTGCTACGTGTGATATTTGCTTCAAAACGTATAAGTCTGCTATGAATTTGCAGCGGCATATTAAAATAACTCATGCACCTCCAGAAGCTGCAAAGAAATgtgaaatatgccaaaagacgttCAAATGCTCAATGCACTTGAAAATTCATAACAATGTTGTCCATTCCAAAGACGGTGAATACGCTTGTGATATTTGCAATAAAGTCTATTCCTCAAAAAAATACATGCTGAAACACAAAAAGACTCACAATAAAAAGGTTTACCCTTGCACCATGTGTCCTAAACTTTTCAAATCGACAAATGATGTAACGAGACACATCAAAAGAGTGCATATGAAGAACGGAGACCAAATACTAGATCAGGATGATACAAGCCAAGAAAATTCTGTTTACGGTGAAGAGACTAGCTGTGTCAAATGCGGTTTAGTTTTCACTAATGATGAAGAATTGCATTCTCATATAATAACTTGTAGCGTAAAAGAAGAATATCCCGATACTGGTGTTAACATACAACATAGTTTCAGCTGTCCTAATTGTGGTCAGTTGTTCAAGGATAATTTAGAACTACAATCCCATTTGTCAAGCTGCAGCCAAATGAAGATAGAACCGGACAATGGaagtatttatattcataatgataACAGTATGGAAGAAAATGCATGTACCAAATGTGGTGAGATGTTTGATGATGACACAGAACTGCACTCTCACAGAATACATTGTGGGAATGAGGTTAAAAATACTGTTGTTAAAATTGAACTTGAGGAAATAAATGATGATTCATATTGA
Protein Sequence: MDTNPEQIFVKPEINIEVEIQPLNEVTTERIDIKTEPLDVNSEGKAVDNLVIKPELPLQYFDDFQRSQEEESSSTEVRPKRSIEIEGKVYKNGKINRLQCPQCSNTFKNRANLRSHLKFVHSTDDDAVDCDICYRTFKSLLHLYSHKSSVHAGEMQVNCDYCDKTFANKKKLNNHIFYCHPDTEEDVNCEVCAKVFKSKYRLKVHMKQVHPEGQTVNCPDCNKEFKNSMLLQRHIKWAHPTDGLIYRCPECNRVLPSIDGYRRHMKAVHGAKKVTCEVCYKVLKTNGSLNRHMATVHSSVKTERKKYKTGDLQCSECDKKFTTNTALLWHYEKFHSENKLETSCHACAKEFCDQNSLKRHMETVHSEQSATCDICFKTYKSAMNLQRHIKITHAPPEAAKKCEICQKTFKCSMHLKIHNNVVHSKDGEYACDICNKVYSSKKYMLKHKKTHNKKVYPCTMCPKLFKSTNDVTRHIKRVHMKNGDQILDQDDTSQENSVYGEETSCVKCGLVFTNDEELHSHIITCSVKEEYPDTGVNIQHSFSCPNCGQLFKDNLELQSHLSSCSQMKIEPDNGSIYIHNDNSMEENACTKCGEMFDDDTELHSHRIHCGNEVKNTVVKIELEEINDDSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01279843;
90% Identity: iTF_01282604;
80% Identity: iTF_01282604;