Basic Information

Gene Symbol
ZFX
Assembly
GCA_012977825.2
Location
Scaffold:2718830-2724348[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.5 1.4e+02 3.2 0.1 3 23 16 36 15 36 0.94
2 15 2.7 2.5e+02 2.4 2.7 1 19 993 1011 993 1016 0.75
3 15 0.00063 0.059 13.8 3.5 2 23 1101 1123 1100 1123 0.97
4 15 0.0022 0.21 12.1 0.3 2 23 1136 1157 1136 1157 0.98
5 15 1.6e-05 0.0015 18.9 2.3 2 23 1160 1181 1159 1181 0.97
6 15 0.019 1.8 9.2 0.4 1 23 1187 1209 1187 1209 0.95
7 15 2.2e-05 0.0021 18.4 4.5 2 23 1216 1237 1215 1238 0.95
8 15 0.098 9.2 6.9 3.7 5 23 1251 1269 1250 1269 0.97
9 15 2e-05 0.0019 18.6 1.5 3 23 1276 1297 1275 1297 0.97
10 15 0.009 0.85 10.2 0.3 2 23 1313 1333 1312 1333 0.97
11 15 6e-05 0.0056 17.0 0.7 1 20 1339 1358 1339 1361 0.92
12 15 2.3e-05 0.0022 18.3 0.8 1 23 1369 1391 1369 1391 0.99
13 15 0.0021 0.2 12.2 3.2 1 23 1397 1419 1397 1419 0.97
14 15 2.1e-06 0.0002 21.6 3.9 1 23 1425 1447 1425 1447 0.99
15 15 0.00027 0.025 15.0 7.2 1 23 1453 1475 1453 1476 0.96

Sequence Information

Coding Sequence
ATGTCCCCGGGAGGATCAAACGGCGGCGGTGGTGGGGCAGTGGCCTGTCCGGTTTGCACGCTGTACCTACGCGAGGGTATCAGTCTGCAAAAGCACTTGGACACCCATCCAAAGGAGCAGGTGATAGAAGCCCTGATCAGGGCGAGTGGCGCGGGTGGCGCTTCGGCTCTCCTCAGTCAGGCTTGTGCACCACAGCCACAGCAGCAGCCTCCGGCGCCCGCGCCGACGCCCACGCCGAGTCCTGGTGCGAACCAGCAACAGCAGCAAACGCCAGCACCTTCGCCGTCACCACATGTTCCTCACGCCCAGTCGCCTTATCCGATTGGGCCAATCTATGAGTGCCCGCCGATCAACGCCATGATACCGCCGCCCCAGTTCGCGTCGTTTAGCTATCAGCAGTTTGTTAATAATGGTACAATGATGATACCCGCGCAGTACGCAATGGCTCAAGCGCAGGCTCCTCCAACAAGTCAGATGATGCAGATGCTGTACAGTCCGTATGGCATGTACCATCAGCAGCAGATTCCGACGGTTCAAATGATCTCGGCCCCGCCAGCACCGATGATGCCAACTTCGACGACGACGATGCCGACGACGGTACCGGCCGTGACGACTCGCATGAGGCCGGCCACAAGCACGAGTAACATCACGATTACTGAGGCACCTACGACGACGCCGATGTTGGCATCGCCACCGAGAACGACGAGCTGCGTGCAGCAACAACAACAGCCCCAACCCCAACCCCAGCCGCAGCAGCTTGACGTCGAGCAGTCGCCTAAACAGCAGCCAACACAGATCATTCATGAGATCATACCAGGACCTGATCGAATTCTGCCGGATTTGGAGATGCCTTCGTCGCCCGAGCCGACGAACGTCGAGACCGAGCATGAAGAGGGTCACATTGAACATAGAGAACAGCAGACTCAGAATACTTGCGCCCAGGAGGAGCAGCGCTGCGTTGATCAATATCAGAGTGAGAGTCCACCAACTTTAATCAGTAATTCCCGCGATGACACTACTGATGATGACAAGACTGAAAGGATTCTACCAGATATTGAGGATAACGAAGGAATCGAATCGCTAATAGATAGAACTACAGAGAACAGGGTAGAAAGTCACAATGACACCGAAAGGCAGGTGGCAGAATCTGTGGAGCACATGGAAGTCGTGATGCATGAAGAACACGCAAAAGAGGAGTCCGTAGAAAATATTCAATGTAGTGAAATACTAGAGAATTCTAGGGAGATCAAAGATAAGTCTAATGACGAGCAAACCGTATGTGACACCGTAGAGCCCCAAGATCTGACGGTCGAGGAAAGTCGAATCAATAATAGTATCCATAAACCTGAAGTCGAGCAAATTGATAGAATGTTAGATAATATGGAATCCGAATTTAGCAATGTAGAGCTGGACAACAAAGTTGTTGATGAGGTACATAACGAAAAGCCTCAAGAAGAAATTCAAGACGCCTTATTGGAAGAACCCGGTGATAAGCATACCGAGGATGACGAGAACACAAGTGTATCGTATCATAAAAATAGTCCAGAGCCCATCGAATGTAAGATTATCCATGCTCATGAAGATACAGACGTGTCCTCCGTTGCCTCCTCGGACTCTATTCATTGCGACTTGGAAATCAAAAAGATCATGACCTCGTCCTATCACTACAAGTGCTCGCATTCTCTACCGACCTCGCCAGTAAGCAAAAAGCACTTCTACCGGTCACTTTCTCGCGCCTCCCAGCGCTCGGACTTTGATCATTCGAACGAAAATCTTTGCTCGTACCCAGTGGGTTTTGAGGCTACCTCACTGCAAGATTACCTCAAAACCAATTACAACGACGAGGACATGGAATTAGAAGAGCCTGTGCCGCACTCCTATATGAAGCAGAACAGTGAAATCATTGCGGAACGTGCTCATTCTCACACACCTCTTTCTGCAAGCATGAGCGGTGTATCAGTACTAAAAGCGCGTCGTAGCAAAGTTCCAACTTCTCCAGTTTCTGTTCGATCAGGTTTCTCTTACGGACACATGGACGAAGAAGATGAGGAAGAAGATGAGGAAGACTCAGATGCCGAAAGCTGCGACAGCTGTCCTGACGAAAAAGATGAAGATGACGAAGATCTGGATGAGGAAGAAGAGAGATTACTGATGGAGCACAAAACCATAGAACGCGTTGATGTGAAAGAAAACTTTCATGAAGAATGCAAAGCCGAGATTATTCTAAAGCAGCAGCCACAACAGGAACAACCCGCGGATTTCCGAGCTCAGAGTCTTATGGTTGAACATTATCCAACCAGCCAATTCCCACTGGATAGTCATCACTCGTCGACTACACAGCAACAACAATCAACCGTCGTTTCAATGCATCACGAGACTTATCCTCTGTCGGCAGAAATATCACAAAATCCATTCAATATGACTGAATGCGTGGACCCGATGACCAGTACGGACTCGAAGAGCTACTCAAGTTCCAGCAAGTTGACGATGCAGAAACCAACGACTGAACTATTAAACATTAGCGAGGATGCGCACGCGGGTCCCATTAACGTTTTCGAAATCGAAGAGCCACCGATTTATGTACCAAGTTCCTTTATCAGCGAGTCATCGCAAAAAGCCGTGAGTGGCACGAGCCACCAGTCGATGTCGAGCAGCGAGAATGGCGCTGGCAACGACGAAGAGGTCAAGAGCGTGAATATGAGGGCAGACGAGACGATGCCACCTAGAGGTGAATTGTCGGAACAGGAGAGCAACGGTTGTACTGAACAGTCAGCCTGGCAGCTCTACATGGGACAAGACTCATCGCGCATGTCGACGTCCTACGATCTGATGGCGCGCGAGAGTTGGGAGGAGTCGGAGGGCTCAGATCACGAGGACAACAACGGAGGCCCTCTCCTGGACAGCCGTTCTCTTGCCACTCATTTCACCGCAAGTCTCTTTCCCGACCGCGATCGTAAAACGCCGACACGACGTATCTTTAAGTGCTCCCACTGTCCAGAAGAGTTCGAGTGCCCCAAAGAACGCCGTGTTCACAGTACAATGGTACACAAAGAGGCTGGTCCATCAGGGTGTAGCAACGACAATATAGATAACCAGCAAGAGCTGAAAGACATCAAGTTGCTCGACGGTCGCGCTAATGTTTTCGAAGATATGTTCTTGCCAAGTAGTCTGCAGCAGGCTTACCTTCATCAACAACCACCGCTGCTTCACCAACTTCAACCACCTCAACACTCGAGCTCTGCCAAGGCCGATACCGATCCTAAGATGGACGTCCAACATCTGTCGACCGTGACCGAAGTTACATGCACTCTGTGTAATCAACGTTTCAGCAGCGAAAAGTCACTGCAGATGCATCACAGGCGCATGCACGCAGCGGAACCTGCGAAACGCGTGCGTGAAAACGCCAAGTGTCAAATCTGCAGCGAGGAGTTCACTTCTGTTGCTAGCTTCAATCTTCATCTGAAGATTCACCCTCTTGAGTGCGGACAGTGCGGCAAGTACTTCTATCGCAAACAAAATTTCAAGCTTCACATGAAGCGACATCTTGGTATAAAACCATTCCCCTGTACGCTCTGCGACAAGGCCTTCCTAACCAAGCAAAAGCTCGACGAACATACAAACGGCCATACTGGCAATGCTCCCGTCAAGTGTAACCTCTGCAATGAGACCTTCAGGCGGTACTCTAATCTTACGCAACACAAAAATCGTCACCATCTGAACATCAAAAAGAAGCTCAAAGATTACATATGCCATTGCGGTGAGGTCTTCCATACGAAGAAGAAGCTTGCATGGCACAAGGAAACCCACGATGAGAAACCCAAGGCCTGTACCTACTGCAACGAGCGTTTCATTCACATGGCTAGCCTGACCCGGCATATGCGTCGTGCCCATAACCGTCGCTTCGTTCCCGATGCGCAGCGCGAGAGCGAAAACGTTGAGTGCCCCATCTGCAAATGTATTTATCTGAGGTCCTCGCTGGCCGTGCACATGCGCGTACACAACGGCGAACGACCCTACGAGTGCCAGGTTTGCTCCAAAGCTTTCAGCACCAAATGGAATTTACAGCTGCACAAGTGGACGCACGCAGCACGTAGTACCAAACCGTTCAAGTGCAATCAATGTAGCGCCGCGTTTTATCGAAACAGTGACTACACGGCCCACATTAATTCTCACCGAAACGTAAGGCCGTACACGTGCAACTACTGCGGTGCCCAGTTCATCAGGAAATACAATTGTCTACGACACGTTAAGGAGCATGAGGAGAACAAAGCGTATACCTGCGACATCTGCAATAAGACCTTCCACAGATCGTACTATCTCAAAGAGCATCTACGGGTGCACTCGGGAGCGCGACCTTATACCTGCCACATCTGCGGCAAATCGAGCAGCACAAAGTCCAATCATAATAAGCACGTCAGGATTCATCACGCGCGTGAGCCTGTAAATACGGAGAATTAA
Protein Sequence
MSPGGSNGGGGGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIRASGAGGASALLSQACAPQPQQQPPAPAPTPTPSPGANQQQQQTPAPSPSPHVPHAQSPYPIGPIYECPPINAMIPPPQFASFSYQQFVNNGTMMIPAQYAMAQAQAPPTSQMMQMLYSPYGMYHQQQIPTVQMISAPPAPMMPTSTTTMPTTVPAVTTRMRPATSTSNITITEAPTTTPMLASPPRTTSCVQQQQQPQPQPQPQQLDVEQSPKQQPTQIIHEIIPGPDRILPDLEMPSSPEPTNVETEHEEGHIEHREQQTQNTCAQEEQRCVDQYQSESPPTLISNSRDDTTDDDKTERILPDIEDNEGIESLIDRTTENRVESHNDTERQVAESVEHMEVVMHEEHAKEESVENIQCSEILENSREIKDKSNDEQTVCDTVEPQDLTVEESRINNSIHKPEVEQIDRMLDNMESEFSNVELDNKVVDEVHNEKPQEEIQDALLEEPGDKHTEDDENTSVSYHKNSPEPIECKIIHAHEDTDVSSVASSDSIHCDLEIKKIMTSSYHYKCSHSLPTSPVSKKHFYRSLSRASQRSDFDHSNENLCSYPVGFEATSLQDYLKTNYNDEDMELEEPVPHSYMKQNSEIIAERAHSHTPLSASMSGVSVLKARRSKVPTSPVSVRSGFSYGHMDEEDEEEDEEDSDAESCDSCPDEKDEDDEDLDEEEERLLMEHKTIERVDVKENFHEECKAEIILKQQPQQEQPADFRAQSLMVEHYPTSQFPLDSHHSSTTQQQQSTVVSMHHETYPLSAEISQNPFNMTECVDPMTSTDSKSYSSSSKLTMQKPTTELLNISEDAHAGPINVFEIEEPPIYVPSSFISESSQKAVSGTSHQSMSSSENGAGNDEEVKSVNMRADETMPPRGELSEQESNGCTEQSAWQLYMGQDSSRMSTSYDLMARESWEESEGSDHEDNNGGPLLDSRSLATHFTASLFPDRDRKTPTRRIFKCSHCPEEFECPKERRVHSTMVHKEAGPSGCSNDNIDNQQELKDIKLLDGRANVFEDMFLPSSLQQAYLHQQPPLLHQLQPPQHSSSAKADTDPKMDVQHLSTVTEVTCTLCNQRFSSEKSLQMHHRRMHAAEPAKRVRENAKCQICSEEFTSVASFNLHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTLCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRNSDYTAHINSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDICNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2