Basic Information

Gene Symbol
ZFX
Assembly
GCA_018906965.1
Location
JACCIB010000004.1:8228645-8233617[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.9 3e+02 3.2 0.1 3 23 25 45 24 45 0.94
2 15 1.2 1.9e+02 3.8 2.9 1 20 1032 1051 1032 1055 0.76
3 15 0.00087 0.14 13.7 3.4 2 23 1140 1162 1139 1162 0.97
4 15 0.0021 0.33 12.5 0.2 2 23 1175 1196 1174 1196 0.97
5 15 2.1e-05 0.0033 18.8 2.3 2 23 1199 1220 1198 1220 0.97
6 15 0.025 3.9 9.1 0.4 1 23 1226 1248 1226 1248 0.95
7 15 2.9e-05 0.0045 18.4 4.5 2 23 1255 1276 1254 1277 0.95
8 15 0.13 20 6.9 3.7 5 23 1290 1308 1289 1308 0.97
9 15 2.6e-05 0.0041 18.5 1.5 3 23 1315 1336 1314 1336 0.97
10 15 0.012 1.9 10.2 0.3 2 23 1352 1372 1351 1372 0.97
11 15 7.8e-05 0.012 17.0 0.7 1 20 1378 1397 1378 1400 0.92
12 15 3.1e-05 0.0048 18.3 0.8 1 23 1408 1430 1408 1430 0.99
13 15 0.0027 0.43 12.2 3.2 1 23 1436 1458 1436 1458 0.97
14 15 2.8e-06 0.00044 21.6 3.9 1 23 1464 1486 1464 1486 0.99
15 15 0.00035 0.056 14.9 7.2 1 23 1492 1514 1492 1515 0.96

Sequence Information

Coding Sequence
ATGGATCTCAGCTCAGCCGTGAGTGCAATGTCTCCGGGAGGCTCGAGTGGCGGAGCTGGTGGAGCAGTGGCCTGCCCGGTCTGCACGCTATACCTGCGCGAGGGCATCAGTCTGCAGAAGCACTTGGATACTCACCCGAAGGAGCAGGTGATAGAAGCCCTGATAAGGGCTAGCGGAGCTGGCGGCACCTCGGCACTCCTCAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCCGGCGCCTGCGCCGACGCCCACGCCGAGCCCTGGTGCAAACCAGCAGCAGCAGCCGCCCCCGCCGCAGCAGCAACCGCCAGCCGCCTCGCCGTCACCACATGTTCCTCACGCTCAGTCGCCTTATCCGATTGGGCCCATCTTCGAGTGCCCGCCGATCAACGCCATGATACCGCCGCCCCAGTTCGCCTCGTTCAGCTACCAGCAGTTCGTTAATAATGGTACAATGATGATACCCGCGCAGTACGCGATGGCCCAAGCGCAGGCTCCTCCGACAAATCAAATGATGCAGATGCTGTACAGTCCGTATGGTATGTACCATCAACAGCAGATCCCCACGGTTCAAATGATCTCGGCTCCGCCAGCTATGATGCCAACTTCGACGACGACTATGCCAACGACGGTGCCGGCAGTCACGACGCGCATGAGGCCGGCCACGAGTACGAGTAACATCACGATCACCGAGACACCGACGACAACGCCAATTCCTGTATCGCCAACGAGAACGACGAGTTGCGTGCAGCCGCAACAACAGCAGGCTCAACCCCAGAGCCAACCGCAGCAGCTTGACGTAGAGCCACCCAAACAGCTCCCTCCGCAGATCATTCATAAGATCATACCAGGACCGGATCGTATATTGCCGGATCTGGAGATGCCCCCGTCGCCCGAGCCGACGCAGGTCGAGCCCGAACACGAAGAGGGCGATGTAGAAAATAGAGAACAGCAGACTCAAAGCACTTGTGCTCATCAGGAAGAGCAGCGCAACGTTGATCAATATCAGAGTGAGAGTCCACCAACTATGAGCAGTAATACCTGTGACGACACTGCTGATGATGACAAGACTGAAAGGATTCTACCGGATATTGAAGATAACGAAGAAATTGAATCGCTCTTAGTTAGAAGAATAGAGGACAGGGTAGAGACTCACTATGATACCGAAAGACCAGCGAACAGGGTAGAGACTCACAATGATACAGAACGACCAGCATCAGCATCTGTTGAACAGATGGAAGTCGTGACAAGCGAAGAAGATGCAAAGAAGGATTTGGAGGAAATTGTTCAATGTAGTGAGAAATTAGACAATTCTGCGGAGCTCACAGATAAACCTAGTGACGACCAAGTCGTCTGTGACATCGTAGAGCCCCAAAATTTAACTACTGAAGAAAGTCGTATCGATAGCATTGTTCATAAACCTGAAATCGCTCAAATTGACAGAATGTTAGATAATATAGAATCGGAATTCAACAACGTAGAATTAAACAGTAAAGTCGTAGACGAGGCACAGATTGAAAAACCTCAGGAAGAAGTTCAAGATGCCTTATTGGAAGAACCTGTTGAAAAACATACCGAGGATGACGACAACACAAGCGTATTATATCATAAAAATAGTGCTGAACCAATTGAATGTAAAATTATTCATGCTCACGAAGATACAGACGTATCTTCAGTAGCTTCATCTGATTCCATTCACTGTGACATGGAAATCCAGAAGATTATTACCTCATCCTATCATTACAAGTGCTCACAGTCTCTACCGACCTCACCTATTAGTAAAAAGCACTTCTACCGGTCACTTTCTCGAGCTTCCCAACGCTCAGACTTCGATCATTCGAATGAGAATCTATGTCCGTACCCGGTAGGTTTCGAAGCTACCTCCCTGCAGGATTATCTAAAAACCAATTTCAATGATGAGGATATGGAACTCGAAGAGCCTGTGCCTCACTCTTACATGAAGCAGAGCAGTGAAATTATTGCGGATCGTGCAAATTCTCATACACCTCTTTCTATAAACATGAGTGGTGTATCTGTACTGAAAGCACGCCGTAGTAAAATTCCAATCTCTCCGCTTTCTGTGCGATCTGGTTTTTCCTATGGTCATATGGAGGAAGAAGATGAGGAAGAAGACGAGGAAGACTCGGATGTTGAAAGCTGCGATAGCTGTCCGGACGACAAAGACGAGGATGATGAGGATTTGGATGAGGAAGACGATCGATTACTGATGGAGCAAAAGGCCATAGAACGTGTTGACGTAAAAGAAAACTTGCGCGAAGATTGTAAAGCTGTGATAGCAGCCGAAATTATGCTTAAGCAGCAACAGCTGGAACAGCCAGCAGATTTTCGAGCTCAGAGTCTCATGGCTGAACACTATCCAACTGGTCAATTTCCACTTGATGGTCACCATCCGTCGTCTACGCAGCAACAGCAATCGACCATTGTTTCAATGCATCATGAGACCTATCCTTTGTCAGCGGAAATATCACAAAATCCATTCAATATGGCGGAATGTGTCGACCCAATGACTAGCACGGATTCAAAGAGCTTCTCTAGTTCAAGCAAGTCAACGCATCAAATGCAGAAACCAACGACTGAACTTTTAAATATAAGCGAGGACGCTCATGCTGGTCCCATTAATGTTTTTGAAATCGAAGAGCCACCTATTTATGTACCAAGTTCCTTTATCAGCGAGTCATCGCAAAAAGCCGTGAGTGGTACGAGCCACCAGTCAATGTCCAGCAGCGAAAATGGTGCTGGTAACGATGAAGAGGTCAAAAGCGTAAATATGAGGGCGGATGAGACGATGCCACCTAGGGGTGAACTATCCGAACAAGAGAGCAATGGTTGTACTGAACAGTCAGCTTGGCAGCTCTATATGGGACATGACTCATCGCGTATGTCGACGTCTTACGATCTGATGGCGCGCGAGAGTTGGGAGGAATCGGAAGGTTCGGATCGCGAGGACAATAACGGAGGTCCCCTCCTGGACAGCCGTTCTCTTGCCACCCATTTCACCGCCAGTCTCTTTCCTGACCGCGATCGCAAAACGCCCACTCGACGTATCTTCAAGTGTACGCATTGCCCGGAAGTATTCGAATGCCCCAAAGAACGTCGTGTTCATAGTACAATGTTACATAAAGAAGCTGGTCCCTCGGGGTACAGCAACGACAATACGGATAATCAGCCGGAACTAAAAGATATCAAGCTTCTCGATGGTCGCGCTAACGTTTTCGAAGATATGTTCATGCCGGGGAGTCTACAGCAAGCATATCTTCATCAGCAGCCCCCGTTACTTCATCAGCTTCAACCGCCTCAGCACTCGAGTTCTGCAAAGGTCGATGCCAATCCTAAGATTGACGCGCAACATCTGTCAGTCGCTAACGAGGTCACTTGCAGTCTGTGCAATCAACGTTTCAGTAGTGAAAAGTCATTACAGATGCATCACAGGCGCATGCATGCGACTGAACCTGTGAAACGCGTGCGCGAAAACGTCAAATGTCAAATCTGCAGCGAGGAGTTCACCTCTGTTGCCAGCTTCAACCTTCATTTGAAGATACATCCCCTGGAATGCGGACAGTGCGGCAAGTACTTCTATCGAAAGCAGAATTTCAAGCTTCACATGAAGCGCCATCTTGGTATAAAGCCATTTCCCTGCACGCTTTGTGATAAAGCCTTTCTTACCAAACAAAAACTCGACGAACACACGAACGGTCATACTGGCAATGCTCCTGTCAAATGCAATCTCTGCAATGAAACTTTCAGGCGGTACTCTAATCTAACACAACACAAAAATCGGCATCATCTTAATATCAAAAAGAAGCTGAAAGACTATATATGTCATTGCGGTGAAGTCTTCCACACAAAGAAGAAGCTCGCATGGCATAAGGAAACCCATGATGAGAAACCGAAGGCCTGTACCTACTGCAACGAGCGTTTCATCCACATGGCTAGCCTGACCCGTCACATGCGCCGTGCCCACAACCGCCGTTTCGTTCCTGATGCCCAGCGCGAGAATGAAAACGTTGAATGCCCCATTTGCAAGTGTATTTACTTGAGGTCCTCGCTAGCGGTCCACATGCGCGTGCACAATGGTGAACGACCGTACGAGTGTCAGGTCTGCTCCAAAGCTTTCAGCACCAAGTGGAACCTGCAGTTACACAAGTGGACGCATGCAGCACGTAGTACTAAGCCGTTCAAGTGCAATCAATGTAGCGCCGCATTTTATCGGAACAGTGACTATACAGCTCACATTAATTCTCACCGGAACGTCAGGCCGTACACGTGCAACTATTGCGGTGCTCAGTTTATCAGGAAATATAATTGCCTGCGGCACGTTAAGGAGCACGAAGAAAATAAAGCGTACACTTGCGATATTTGCAACAAAACTTTCCATAGGTCGTATTATCTCAAAGAGCATCTACGGGTGCACTCAGGGGCACGCCCCTACACTTGTCACATTTGCGGCAAATCGAGTAGCACAAAGTCCAATCATAATAAGCACGTCAGGATTCATCACGCGCGCGAGCCTGTAAATACGGAGAATTAA
Protein Sequence
MDLSSAVSAMSPGGSSGGAGGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIRASGAGGTSALLSXXXXXXXXXXXXXXXXPPAPAPTPTPSPGANQQQQPPPPQQQPPAASPSPHVPHAQSPYPIGPIFECPPINAMIPPPQFASFSYQQFVNNGTMMIPAQYAMAQAQAPPTNQMMQMLYSPYGMYHQQQIPTVQMISAPPAMMPTSTTTMPTTVPAVTTRMRPATSTSNITITETPTTTPIPVSPTRTTSCVQPQQQQAQPQSQPQQLDVEPPKQLPPQIIHKIIPGPDRILPDLEMPPSPEPTQVEPEHEEGDVENREQQTQSTCAHQEEQRNVDQYQSESPPTMSSNTCDDTADDDKTERILPDIEDNEEIESLLVRRIEDRVETHYDTERPANRVETHNDTERPASASVEQMEVVTSEEDAKKDLEEIVQCSEKLDNSAELTDKPSDDQVVCDIVEPQNLTTEESRIDSIVHKPEIAQIDRMLDNIESEFNNVELNSKVVDEAQIEKPQEEVQDALLEEPVEKHTEDDDNTSVLYHKNSAEPIECKIIHAHEDTDVSSVASSDSIHCDMEIQKIITSSYHYKCSQSLPTSPISKKHFYRSLSRASQRSDFDHSNENLCPYPVGFEATSLQDYLKTNFNDEDMELEEPVPHSYMKQSSEIIADRANSHTPLSINMSGVSVLKARRSKIPISPLSVRSGFSYGHMEEEDEEEDEEDSDVESCDSCPDDKDEDDEDLDEEDDRLLMEQKAIERVDVKENLREDCKAVIAAEIMLKQQQLEQPADFRAQSLMAEHYPTGQFPLDGHHPSSTQQQQSTIVSMHHETYPLSAEISQNPFNMAECVDPMTSTDSKSFSSSSKSTHQMQKPTTELLNISEDAHAGPINVFEIEEPPIYVPSSFISESSQKAVSGTSHQSMSSSENGAGNDEEVKSVNMRADETMPPRGELSEQESNGCTEQSAWQLYMGHDSSRMSTSYDLMARESWEESEGSDREDNNGGPLLDSRSLATHFTASLFPDRDRKTPTRRIFKCTHCPEVFECPKERRVHSTMLHKEAGPSGYSNDNTDNQPELKDIKLLDGRANVFEDMFMPGSLQQAYLHQQPPLLHQLQPPQHSSSAKVDANPKIDAQHLSVANEVTCSLCNQRFSSEKSLQMHHRRMHATEPVKRVRENVKCQICSEEFTSVASFNLHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTLCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRNSDYTAHINSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDICNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01274744;
90% Identity
-
80% Identity
-