Ppup010938.1
Basic Information
- Insect
- Pteromalus puparum
- Gene Symbol
- -
- Assembly
- GCA_012977825.2
- Location
- Scaffold:675893-692188[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 5.9e-06 0.00055 20.2 1.0 1 23 225 247 225 247 0.98 2 31 0.0025 0.24 11.9 1.9 1 23 270 293 270 293 0.96 3 31 0.00041 0.038 14.4 0.5 2 23 300 322 299 322 0.96 4 31 0.00068 0.064 13.7 0.9 1 21 342 362 342 363 0.94 5 31 0.0025 0.24 11.9 0.1 2 23 474 495 473 495 0.96 6 31 0.014 1.3 9.6 0.3 1 23 501 524 501 524 0.91 7 31 0.00011 0.01 16.2 0.1 1 23 593 616 593 616 0.96 8 31 0.0075 0.7 10.4 0.4 1 23 622 645 622 645 0.96 9 31 0.11 11 6.7 1.5 1 23 658 680 658 680 0.97 10 31 8e-05 0.0075 16.7 0.3 3 23 725 746 724 746 0.96 11 31 0.94 88 3.8 0.5 2 23 806 829 805 829 0.93 12 31 2.9 2.7e+02 2.3 0.0 2 23 838 860 838 860 0.84 13 31 0.069 6.5 7.4 0.1 2 23 867 889 866 889 0.93 14 31 1.2e-05 0.0011 19.2 1.2 1 23 897 919 897 919 0.98 15 31 0.12 11 6.7 0.1 2 23 969 992 968 992 0.95 16 31 0.0002 0.018 15.4 3.3 1 23 995 1018 995 1018 0.97 17 31 0.016 1.5 9.4 0.5 2 23 1025 1047 1024 1047 0.95 18 31 0.00066 0.062 13.8 4.8 1 21 1088 1108 1088 1109 0.94 19 31 0.0025 0.24 11.9 1.8 2 23 1123 1144 1122 1145 0.93 20 31 0.81 77 4.0 3.1 1 23 1148 1170 1148 1171 0.95 21 31 0.009 0.84 10.2 1.9 2 23 1178 1201 1177 1201 0.94 22 31 0.9 85 3.9 0.2 2 23 1209 1231 1209 1231 0.95 23 31 3.4 3.2e+02 2.1 0.0 2 23 1238 1260 1237 1260 0.87 24 31 0.21 20 5.9 2.7 2 23 1269 1291 1269 1291 0.96 25 31 0.25 23 5.7 0.8 2 23 1297 1319 1297 1319 0.93 26 31 0.11 9.9 6.8 0.5 1 23 1387 1410 1387 1410 0.96 27 31 0.0028 0.26 11.8 1.8 1 21 1440 1460 1440 1461 0.94 28 31 0.3 28 5.4 1.9 2 23 1551 1573 1550 1573 0.94 29 31 0.63 59 4.4 0.4 2 23 1580 1602 1579 1602 0.95 30 31 0.16 15 6.3 1.8 1 23 1613 1635 1613 1635 0.97 31 31 0.036 3.4 8.3 0.1 1 20 1642 1661 1642 1663 0.94
Sequence Information
- Coding Sequence
- ATGGAGCAGAGGGAGAAGAAGTACGATGAGCTTTGCAGGCTCTGCGCCTCGTACGATGCCGTCAAGATGGACATCTTCGGTGAGGATGGCAAGCAGCGACAGCTCGTCGAAAAGATACAGACTTTACTGCCGTTCAAGATCGCTGAAGATGACCGACTGCCGAAATGCCTTTGCTACAGATGCATGTACAATTTGGAGAGTTTCTACAACTTTAGAACGGCCTGCGTCAACGCGATCGCTATGCTGGAGAGATGTTTGCCACCGGTTGATACGACGAAGGTGGAGATCAAACAAGAGAACAACGATTCGTCCGAGCCGTATTCGGAGCTGAGGATGGAGCTGTTGAAGGACAAAGACACAGGAAACGGTTCCGGTGGAGGTATGTCGATGCTCATACCCGAGGCGCCAGTCGTCAATCCAAACGCGGCCCTCGGCACACCTCCAAGACTCAAGTCAGACGGTGAACCCGACAACGAGGAGATCAGAGACTCCGCTGCTGACGATGAACGTCTGGACGATCACGATAAGTCGGACGAGTACTATATGGACATGGAGACGAACCCAAGCGACTTCCTGGAAATGAGCGCGCTGGTACCGGAAGAAGAGAACGTCCTTCCAACCCAGCAGCAGAATTCCGGCGTCTTCCAGCATCGTAACGAGCAACACGAGGTCTACGTTTGCTCACTCTGCAACAAGGCTTTCAGCTCGAAAGGACATCTGTCGCTGCACGCGAGGATACACGTCGGCGCTGGAGACGTCATTGGCGAAAAAGTCATCACTGACGATCACACCTCCTACAAGAGGCCTTACCAGTGTGACCTTTGCAACAAGTCCTATTCCACGGCGAAGCATCGCTGGGGACACGTTTCCACCACTCACAGGGGTCACCCAGCAGTGACGTGCGGCTACTGCTCGCGCATCTACTCGACGCGCACGAACCTCGAGGAACACGTAAAGTCGCGCCACGCTGGTCAGCCACCGCCGCCAGAAAGCCCGGCCCCCTACGTCCAGCCAGATTCGCGACATCAGTGCAAGACCTGCCCGAAGATGTACACCAACATTACCGATCTCAATAAGCACAGTCGCGTTTGCCTGGGCGAACAGCAGCGCAAAGAGCAGGCCAATAACAGTTTCAATCCTCAGAACTTCGGTAAGAGAAATGCCATGTCCAAGCTTAAAAATGCCTTGGACCCGGCGTCCGATTTATCCAGCATCGATTCAGACTACGAGAACAAAGATTACAGGAGCGCGGAAGCGAAACTTGCCAAAAATCCTCAGTTAACCATCCTCAAGCAGGCCCTCATTAAGGGTGACAGCGCGAAGAAGGAGTACGAGGAGAGGCAGAAAATGCTTAGTAAATCAAAGAAACAGGCTAATGCTAGTAATAGAGAAGGAATGGATCCTGACGTGAAGAGATGGTACTGCGAGGTCTGCCCGCTGAACTTTGCGACGGTCGACGAGTTGAGACAGCACGAAAAGTCCCACGACGCCGATAAGCCTTACATATGCATTCTTTGCGAGAAGGACTTTGTTCTAAAATCGTCCCTCAGCAGGCACATACTCTCGTCTCACGGGGTCGATCCCACACCGCTAGTCGAGAGCGACAAATGTCTGAAGAAATCCGTACAGGAGGCGAACATGCAACCGCCACTTATCAAAGTGGAACCGAACGTTACCAAAGAAAACTCTTCGTCGCCATTTTCTGCTGATAATATGGACAATGACGAAGACGAGCACGAGAACGGCAACGACAACATGCTGGAGATTGAGACGGTCTTCGTCTGCGAGATATGCACGCGCGACTTCAACGACCGCGCCTCACTATGGCTGCACATCCGCGCTACTCACAAAGAGTACGCGGCATTCGCTTGTGGCGTCTGTCTGAAAATCTGCTCAGACAACGCCCAACTGCTAAATCACGTGAACATGTATCACGGAGGTAACAAACTACTGATGTCCGAGCAGCGCAGGTACAGCTGCACGATATGCGGTCGACAGCACGACTCCCGCAAGAAACTCATCACCCACGTGTCCATACACAATATTGATCCTAGCTACGATCCTGCAAACTTTGTGCAACTCAATACCAATTACTATAATGAAAATGTGAATAGTAACGAAGGTGGCAACGAGTTGATTATGGATTGCGATGATGAGAGTGAAAAGGCTGATTGTTACATCTGCTACAAGAGATTCCCGAACGAAGACCAGCTCATCCGACACCAGAGGAATGCGCACAAGTCCGAACAGTTGGTTGAGGTAGGTGGCAATGGCGGAGTTCCCGGTCAAAACGGTACCGGAAATCGCGCACAGTACCACCTATTCTTCGTTTGCGAGCTTTGCGGAAGTTCACATCCGAGCAAGTGGGAGAGATGGCTGCACGTCAGCAGTATGCACGGCAACGAACTTGTTATACGGTGTGAACGCGACGACTGCGCCAAAATCTTCGCTACGAAAGCTCTGCGCAACGAGCACGCGCAGCATCATCAGTTGCAAGGTGCTTCACCTAACACTTGCGAGATCTGCGGAAAGCTCTGGGGCAGCCGAGTCGACTACTGGAAGCACGTGATGGGTGTCCACGCAGATACGGTACCTCTCATCTGCGGTGTCTGTCTCAAGGTCTTCCCTGACGTGATGCAGCTCAGTCAACACGTCAAGCTAAAGCACTGGCCGTTGACCAATGGTGACTTCAGCTGCGACATCTGCGGAAGACCGTACTCCAACAAGAGCAAAATGTCGAGGCATAGGAAGATTCACGGACTCGATGGAGAAGTTTACAATCCATCGGCTACTAACAGTAGTTTGATAATTAATGACGCTTCGAGTGAAATGATAGGTCTTCCAATGCCCTTAAGCCTGGACAACGGTATGCCTCAACCGATCGAACCAGTCTCGCTCGACTTGAGCTGTGAGATGTGCGGTGACCTGAAGTTCAATACCTTGGAAGACCTGGGCAATCATCGCCGCATGGCCCACAGCCTCTTTCCCTGTGACCTCTGCAACAAATGTTACGGCCGTACCTCTCACCTCTGGAAACACGTGAATCGCGTGCACAAGGGTCACGAAGACGTGACGTGTCGCTTCTGCCTCAAAACCAGCGCTTCGAAGGATCACTTGGCCGCTCACATTGCCAAGATACACAGATACGAACCGGATGTGAAGAACGAAATGGATATAAAGCGCGATAATATGGTCTACAAGAACAGTAGTAGTAATTACTATCACATGGCTGCGGCTCAGTCGCCCGAGGAGGACGGTCTGCACTTCTGCGAAAAGTGCAACAAATCCTTCCACAAACGGTACCTTTTACGTCGTCACATGAAGGGATGCCAGAACTATCGCAAAGATCCGGCTGCTCTTCTAACACGTTGTCGCGCTTGCGAGCGCATATTCAAGGACCGAGCTAGTCTGCAGAAACACATTGAAAATCACCATAGCTCGTACGAGTGTCATCTTTGCAAGGAGACGATCACCTCGAAGCTTGGTATTATGACGCACAATCGTATGCATCACATGCATCACCCGGACCTCACCTGCGAGCTTGAGCACTGCCGTAAGTTGTTCAGGACAAAGGAGGATTTGGAGTTGCATCGCAAGGATCATCAGCATCTCGGAACCCCGAACGTATGCGATTTCTGTGGAGATACGGTCGAGAACAAACTGAAGCTCAAGATGCACATTCTGAGTCTGCACAGGAACGAGATTGGGGTCTCGTGTGGAGTTTGTTTGATACCGATGAAGGACCCCAAGGATCTCAAGAAGCACGTTGAAGACGTGCATGAGAGCATTTTGCTGAGACCCAATACCTGTCAGGTCTGCGGCAAGCAGTATGCCTCCAAGTGGAAAGCCTTTGATCACACGAAAAAGTGCCACGGCAAGGTCTTCCGCACGTGTAAGCAGTGCTTGGCAGTCTTCACCTCGGACGAGGATCTTCGCTACCATTACGAGCACATTCACAACATTCCTAAAGACCAGCTTGACGCGTTCCAGTACCGGCTCGAAGTCGCCGGTAATAAGATGGACGACTACGATTTGGGTGCGCTCGAAGTCGTTGTCAAGGAGGAACCCGAGGATCTTGATTTTGACTGCGACGCCTTTGACGACGATACCAATGGAAACTCGAATGATTCCAAACGTAGGCGCTCGATCACAGATACCTTCGACTGCGAGATGTGTCCAGAGATATTCTTGAATCACGAGCTGCTGTCGTCGCACTACAGGAACGTTCACAATACAGATCCTGAAAGGATGTTCAAGAGGATCAAACTGGATCCTTCGAGCAGCAACCCTAAGAAAAATATGCGCGAAAGGGAGAACTACGAGTGCAAGAACTGTCAGAAGCAGTTCTGCACCAAGGCGCTTTACATGAGCCACGTAAACGCCTGCACCCGTAAATCTGTGCCTACGTCAATTCTAGAAGCTCACTTGAAGAATAACAATCAGATCAAGCGCGAAGAACCCGAACCCATTGTCTGCGAGACAAATCTGAACATCCCGGACTTCAACCTATTCGAGGACATCAACATGCAGCTGTCAGGCCAAAAGCCCGTGCCAAGCCTTATGCCGCTCGGTGGACACTCGTCCAAGTCGTCCAAGTATTCGCGTAAGGACTCGCGCAAGGTCTACGATGAGTCGACGAACACCGAGTGCACTTGCGAGGTGTGCGGCAAGCAATGGCCCGCGAAGAAGCATCTGTGGCAACATTTGATCAGGTTCCACAGAGCAGAAGCTGCCGTGACTTGTGGCGTTTGCCTGAAGCTTTGTGCAACGTACGAAGACCTATCGGAACATCTAAAGAACGTGCATCCATCAATTCTTTCCACCGCTGGCAACAACTTCACGTGTAAGATTTGTGGACGTTATCACAACGCACGCAGCAAGCTCTTACTGCACATGAGCATTCACATCGACTGCAAGAACAACTTTATGTGTCAGCGATGCAACATCAGCTTCGACTCCGAGGAGAAATTAAATGAGCACGTGGTATCCTGCGTTGTGGTTCCTAATCAGAGTGAGGCCGGCGAAGAACCGGTCATGGTGAAAGAAGAGAGCGAAGAAAAGGGTAGTCTCATCGGCGACGAAGAGGATGAAACGCAGGAAAACGAGGTAGAGTCCGGAGACGAGAATTCAGACAACGCTGACAGCAGTTCCGATAAATCCAATGATTCGGATAGCAGTAACAGTAATAGCAACAGTGACAGTTCTAGCGACGATGACAGCGACGATGACGAAGAAGACGGTCGGTCGCAGAACGTAGATAAGGACAGCAACAGCAGCGAGGACTCCGAAAATGCAGAGGAGATCCAGCCACAAGTCGAGGTCAAGCACCAGATGATGGAGGAGACGATGAGCCTTGGTGAGGAGGACGAGGAGGAAGATGGCATGTCCGAATCGGAGAACGACGATTATCTGAAGAAGCAGCAAGAGGCGCAGCAGCAACACGGCATCGAGAACCGCTACGAAATTCAGCAGAAGGAGGCTATGTTAGTCAATTATTCGGACGACGAGGGACCCCCCGCTCTCAGTCCAATGTTGCCTCAGGCGATCAACGAAGGCAGCGCGCCGAACGAGGATAGCCAGGAAGAGTTGACGAATAGGCACATGACTATGAATGACTCATTGAACGTTAAGAAGGAAAAGAGCGACGATAGCGACGAGAATAGCAGCGATGAGGAGGTGCAAGAATCTGGAGACGATGAGGTGCAGCAGGCAGAGCTCGTGGATCCCAACGCTGCCTTCCATGCGGATAATAACTCGACGAGTAGTAATGAAGGCGAGGAAGAACAAGAGGAAGGCGAAGAGCAGGAAGTAGAGGAAGAACAAGAAGAAGAGGAGCAAGAGCAGGAGCAAGAGCAAGAGCATGAGCATGAGCAAGAGCAAGAGCATGAGCAAGAGCAAGAGCAAGAGCAAGAGCAAGAACAAGAGCATGAGGAAGTAGAGGAGGAAGAGGAAGAAGAAGAAGGGCAAGAGCTCGAAATCCAGGAGCACGAAATGCATGAGGACGAAGCACAGGAGCACGAAGTACAAGAAGTCGAAGAAGAGGAAGAAGACGGCAACGTAGAGCACGGTATGAATGAACATGAAGTGTTAGAGGTCGACGAGAATGGAATGCATAATCTGAACGGCACAGTGTTGATGCTGACCAATGATGCGGATGGCAATCAGATCCTAATCGAGCGCAACATGGCCGATCTCGAGAACGACGACTCTGTCCACGACATGGCACAGTACGTCTTCCAGGATGGCACAGGCTTTGCCCTCGAGGACTACGAGGCCATTGTCGAGAATCAAGGTGAGGAGGAAGAAGAGGGACAAGAGCACCATGGTTTCGAGATGGAGATCGGTAACGCACACGAGGAAGAGGTCGAGGAACAGGAACAGGAGGAGGAAGAAACCGAGGAACGAGGCGAGGAATACGAAGAAATGGAGGAGGGCGAAGAGATGGAAGAGGCGACTGAAGAGCACGAAGAGGTGGAAGAGAACGACGAGGAGGAACTCAGTTCTAGTGCCAAAAGCTAA
- Protein Sequence
- MEQREKKYDELCRLCASYDAVKMDIFGEDGKQRQLVEKIQTLLPFKIAEDDRLPKCLCYRCMYNLESFYNFRTACVNAIAMLERCLPPVDTTKVEIKQENNDSSEPYSELRMELLKDKDTGNGSGGGMSMLIPEAPVVNPNAALGTPPRLKSDGEPDNEEIRDSAADDERLDDHDKSDEYYMDMETNPSDFLEMSALVPEEENVLPTQQQNSGVFQHRNEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHVKSRHAGQPPPPESPAPYVQPDSRHQCKTCPKMYTNITDLNKHSRVCLGEQQRKEQANNSFNPQNFGKRNAMSKLKNALDPASDLSSIDSDYENKDYRSAEAKLAKNPQLTILKQALIKGDSAKKEYEERQKMLSKSKKQANASNREGMDPDVKRWYCEVCPLNFATVDELRQHEKSHDADKPYICILCEKDFVLKSSLSRHILSSHGVDPTPLVESDKCLKKSVQEANMQPPLIKVEPNVTKENSSSPFSADNMDNDEDEHENGNDNMLEIETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICSDNAQLLNHVNMYHGGNKLLMSEQRRYSCTICGRQHDSRKKLITHVSIHNIDPSYDPANFVQLNTNYYNENVNSNEGGNELIMDCDDESEKADCYICYKRFPNEDQLIRHQRNAHKSEQLVEVGGNGGVPGQNGTGNRAQYHLFFVCELCGSSHPSKWERWLHVSSMHGNELVIRCERDDCAKIFATKALRNEHAQHHQLQGASPNTCEICGKLWGSRVDYWKHVMGVHADTVPLICGVCLKVFPDVMQLSQHVKLKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGEVYNPSATNSSLIINDASSEMIGLPMPLSLDNGMPQPIEPVSLDLSCEMCGDLKFNTLEDLGNHRRMAHSLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRFCLKTSASKDHLAAHIAKIHRYEPDVKNEMDIKRDNMVYKNSSSNYYHMAAAQSPEEDGLHFCEKCNKSFHKRYLLRRHMKGCQNYRKDPAALLTRCRACERIFKDRASLQKHIENHHSSYECHLCKETITSKLGIMTHNRMHHMHHPDLTCELEHCRKLFRTKEDLELHRKDHQHLGTPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHESILLRPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSDEDLRYHYEHIHNIPKDQLDAFQYRLEVAGNKMDDYDLGALEVVVKEEPEDLDFDCDAFDDDTNGNSNDSKRRRSITDTFDCEMCPEIFLNHELLSSHYRNVHNTDPERMFKRIKLDPSSSNPKKNMRERENYECKNCQKQFCTKALYMSHVNACTRKSVPTSILEAHLKNNNQIKREEPEPIVCETNLNIPDFNLFEDINMQLSGQKPVPSLMPLGGHSSKSSKYSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCATYEDLSEHLKNVHPSILSTAGNNFTCKICGRYHNARSKLLLHMSIHIDCKNNFMCQRCNISFDSEEKLNEHVVSCVVVPNQSEAGEEPVMVKEESEEKGSLIGDEEDETQENEVESGDENSDNADSSSDKSNDSDSSNSNSNSDSSSDDDSDDDEEDGRSQNVDKDSNSSEDSENAEEIQPQVEVKHQMMEETMSLGEEDEEEDGMSESENDDYLKKQQEAQQQHGIENRYEIQQKEAMLVNYSDDEGPPALSPMLPQAINEGSAPNEDSQEELTNRHMTMNDSLNVKKEKSDDSDENSSDEEVQESGDDEVQQAELVDPNAAFHADNNSTSSNEGEEEQEEGEEQEVEEEQEEEEQEQEQEQEHEHEQEQEHEQEQEQEQEQEQEHEEVEEEEEEEEGQELEIQEHEMHEDEAQEHEVQEVEEEEEDGNVEHGMNEHEVLEVDENGMHNLNGTVLMLTNDADGNQILIERNMADLENDDSVHDMAQYVFQDGTGFALEDYEAIVENQGEEEEEGQEHHGFEMEIGNAHEEEVEEQEQEEEETEERGEEYEEMEEGEEMEEATEEHEEVEENDEEELSSSAKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01037254;
- 90% Identity
- iTF_01037254; iTF_01036458; iTF_01035659; iTF_01487238;
- 80% Identity
- -