Plou008746.1
Basic Information
- Insect
- Psyttalia lounsburyi
- Gene Symbol
- -
- Assembly
- GCA_030522865.1
- Location
- JAPYZN010003054.1:5440-6153[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7e-15 2.1e-11 44.3 0.1 3 38 16 52 14 56 0.91 2 2 0.42 1.2e+03 0.3 0.0 10 25 51 65 50 65 0.85
Sequence Information
- Coding Sequence
- ATGAGGAATTACAAGAGGAAGACGGACAGGCAGAGCTGGAGCTCGACGGATATGGCACAGGCCATTGCTATGGTCGTTGAGAAGAAATTGGGAATTAACAAAGCTGCACAGTTGTTCAGTGTGCCCAGTACTACTTTGCAGAATCGAGTCAAGAAGTATCAGAGTGGCTGCTCCCTGGAGGAAGCTGCCAAAAAAGGTTTGGGAAAATTCAAAGCAATATTTACGGAGCAACAGGAGAAATGTCTTGTGGAGTACATCCAGCAGGTCCAGAAGACCAATACCGAGAAGTTTACGACGAAAGATCTGAGAAAATTAGCCTACCAACTCGCAGAGAAGTGCAATGTTCAGCACAAATTCAATGCCGAGGATGGAATGGCAGGGCTGGACTGGTACACTGGCTTCATGAAGAGGCATCCTGAGCTCTCATTCCGCAAGCCCAAGAGCTCTGACGACTACCCGGACCATCACGACTGCCTCGAGATCATCCTGGAGGAGCCCGAAGTGAAGTGTGAACCTGCAGATCCACCAAAACCTTCCATATAA
- Protein Sequence
- MRNYKRKTDRQSWSSTDMAQAIAMVVEKKLGINKAAQLFSVPSTTLQNRVKKYQSGCSLEEAAKKGLGKFKAIFTEQQEKCLVEYIQQVQKTNTEKFTTKDLRKLAYQLAEKCNVQHKFNAEDGMAGLDWYTGFMKRHPELSFRKPKSSDDYPDHHDCLEIILEEPEVKCEPADPPKPSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00046885;
- 90% Identity
- iTF_00728584; iTF_00350923; iTF_00438001; iTF_00438674; iTF_01273016;
- 80% Identity
- -