Dlon008714.1
Basic Information
- Insect
- Diachasmimorpha longicaudata
- Gene Symbol
- -
- Assembly
- GCA_034640455.1
- Location
- CM067954.1:3293078-3296043[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-15 6.1e-12 45.1 0.0 3 38 16 52 14 56 0.91 2 2 0.45 6e+02 0.3 0.0 10 25 51 65 50 65 0.85
Sequence Information
- Coding Sequence
- ATGAGGAACTACAAGAGAAAAACCGACAGACAGAGCTGGAGTTCAACGGATATGGCACAAGCTATTGCTAtggttgttgaaaaaaaattgggaattaaTAAAGCAGCACAGTTATTCAATGTGCCAAGTACTACATTGCAGAATCGGGTTAAAAAGTATCAGAGTGGATGCTCGTTGGAGGAAGCTGCTAAGAAAGGTCTGGGAAAATTTAAAGCAATATTTACTGAACCACAAGAGAAATGCCTCGTGGAATATATCCAACAGGTCCAAAAAAACAACACCGAAAAATTCACAACAAAAGACCTGAGAAAACTTGCCTACCAACTGGCCGAAAAATGTAATGTGCAGCACAAATTCAACGCTGAAGATGGAATGGCAGGATTGGACTGGTACACCGGCTTCATGAAGAGGCATCCGGAGCTGTCATTTCGGAAACCGAAGAGCTCTGACGATTACCCAGACCATCACGACTGCCTCGAAATCATTCTAGAAGAGCCTGAGGTGAAAAGTGAACCAGTAGATCCACCCAAATCTTCCCTATAA
- Protein Sequence
- MRNYKRKTDRQSWSSTDMAQAIAMVVEKKLGINKAAQLFNVPSTTLQNRVKKYQSGCSLEEAAKKGLGKFKAIFTEPQEKCLVEYIQQVQKNNTEKFTTKDLRKLAYQLAEKCNVQHKFNAEDGMAGLDWYTGFMKRHPELSFRKPKSSDDYPDHHDCLEIILEEPEVKSEPVDPPKSSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00046885;
- 90% Identity
- iTF_01273703;
- 80% Identity
- -