Alep002124.1
Basic Information
- Insect
- Aleiodes leptofemur
- Gene Symbol
- -
- Assembly
- GCA_963942555.1
- Location
- OZ012609.1:19926918-19928667[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-10 1.4e-07 31.9 0.1 4 38 17 51 14 56 0.89
Sequence Information
- Coding Sequence
- ATGAGAAATTACAAGAGAAAAACAGACAGACAGAGCTGGAGCTCGACTGGTATGGCTCAGGCAATTGTTCTTgttgttgagaaaaaacttGGAATTAATAAAGCTGCACAGTTGTTTGCTGTACCTAGTACAACACTGCAGAATAGAATTAAGAAGTATCAGAGTGGGTGTACCCTTGAAGAGGCGTCTAAAAAggGCTTGGGAAAATTCAAGGCAATTTTCACCGAACTGCAGGAGAAATGCTTGGTCGAGTACATCCAACAAGTACAGAAAAACAAtactgaaaaatttacaacaaAAGATTTGAGAAGACTTGCTTATCAATTGGCTGAAAAATGCAATGTTCAACACAAATTCAATGCTACAGATGGTATGGCAGGATTAGATTGGTACACTGGTTTTATGAAGAGACACCCAGAGCTATCATTTCGCAAGCAAAAGAGCATTGATGATTATCCAGATCATCACAATTGTCTTGAGATTATTTTAGAAGAGGCAGATGTCAAAACTGAACCAGTTGAATCATCAATAACTTCCAAATAA
- Protein Sequence
- MRNYKRKTDRQSWSSTGMAQAIVLVVEKKLGINKAAQLFAVPSTTLQNRIKKYQSGCTLEEASKKGLGKFKAIFTELQEKCLVEYIQQVQKNNTEKFTTKDLRRLAYQLAEKCNVQHKFNATDGMAGLDWYTGFMKRHPELSFRKQKSIDDYPDHHNCLEIILEEADVKTEPVESSITSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01273703; iTF_00728584; iTF_00350923; iTF_00046063; iTF_00047887; iTF_00438001; iTF_00438674; iTF_00168307; iTF_01273016;
- 90% Identity
- iTF_00046063; iTF_00047887;
- 80% Identity
- -