Basic Information

Insect: Pseudomyrmex dendroicus
Gene Symbol: ZNF236
Assembly: GCA_014825645.1
Location: QVNZ01006537.1:321-11938[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00016 0.019 15.9 0.6 2 23 181 202 180 202 0.96

2 27 0.00072 0.085 13.9 0.4 1 23 208 230 208 230 0.98

3 27 3.2e-05 0.0038 18.1 0.3 2 23 236 257 236 257 0.97

4 27 0.049 5.7 8.1 0.1 3 23 265 285 263 285 0.95

5 27 0.00063 0.074 14.1 0.8 2 23 298 319 298 319 0.98

6 27 3.6e-06 0.00042 21.1 1.4 1 23 340 362 340 362 0.99

7 27 8.9e-06 0.001 19.9 0.6 1 20 368 387 368 390 0.96

8 27 0.00011 0.013 16.4 1.2 1 23 396 419 396 419 0.95

9 27 0.0029 0.34 12.0 0.6 1 23 428 451 428 451 0.97

10 27 2.8e-07 3.3e-05 24.6 0.5 1 23 572 594 572 594 0.99

11 27 0.00063 0.074 14.1 0.8 1 23 600 622 600 622 0.99

12 27 0.0086 1 10.5 4.3 1 23 628 650 628 650 0.97

13 27 4.6e-05 0.0053 17.7 2.4 1 23 654 676 654 676 0.98

14 27 0.0057 0.66 11.1 6.8 1 23 731 753 731 753 0.98

15 27 2.2e-05 0.0025 18.7 4.8 1 23 759 781 759 781 0.99

16 27 1.1e-05 0.0013 19.6 2.1 1 23 787 809 787 809 0.98

17 27 0.00041 0.048 14.6 7.6 1 23 815 837 815 837 0.98

18 27 1 1.2e+02 3.9 1.7 2 23 1189 1210 1188 1210 0.88

19 27 2e-05 0.0023 18.8 2.7 1 23 1216 1238 1216 1238 0.98

20 27 0.0026 0.3 12.1 0.5 2 23 1245 1266 1244 1266 0.97

21 27 3.2e-08 3.8e-06 27.6 1.4 2 23 1335 1356 1334 1356 0.98

22 27 0.00063 0.073 14.1 3.8 1 23 1362 1384 1362 1384 0.99

23 27 2.8e-05 0.0033 18.3 2.2 1 23 1390 1412 1390 1412 0.98

24 27 1.8e-05 0.0021 18.9 2.8 1 23 1418 1440 1418 1440 0.98

25 27 9.2e-07 0.00011 23.0 1.6 2 23 1674 1695 1673 1695 0.97

26 27 0.00012 0.014 16.4 5.4 1 23 1701 1723 1701 1723 0.98

27 27 0.0011 0.13 13.3 4.6 1 23 1729 1752 1729 1752 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00016	0.019	15.9	0.6	2	23	181	202	180	202	0.96
2	27	0.00072	0.085	13.9	0.4	1	23	208	230	208	230	0.98
3	27	3.2e-05	0.0038	18.1	0.3	2	23	236	257	236	257	0.97
4	27	0.049	5.7	8.1	0.1	3	23	265	285	263	285	0.95
5	27	0.00063	0.074	14.1	0.8	2	23	298	319	298	319	0.98
6	27	3.6e-06	0.00042	21.1	1.4	1	23	340	362	340	362	0.99
7	27	8.9e-06	0.001	19.9	0.6	1	20	368	387	368	390	0.96
8	27	0.00011	0.013	16.4	1.2	1	23	396	419	396	419	0.95
9	27	0.0029	0.34	12.0	0.6	1	23	428	451	428	451	0.97
10	27	2.8e-07	3.3e-05	24.6	0.5	1	23	572	594	572	594	0.99
11	27	0.00063	0.074	14.1	0.8	1	23	600	622	600	622	0.99
12	27	0.0086	1	10.5	4.3	1	23	628	650	628	650	0.97
13	27	4.6e-05	0.0053	17.7	2.4	1	23	654	676	654	676	0.98
14	27	0.0057	0.66	11.1	6.8	1	23	731	753	731	753	0.98
15	27	2.2e-05	0.0025	18.7	4.8	1	23	759	781	759	781	0.99
16	27	1.1e-05	0.0013	19.6	2.1	1	23	787	809	787	809	0.98
17	27	0.00041	0.048	14.6	7.6	1	23	815	837	815	837	0.98
18	27	1	1.2e+02	3.9	1.7	2	23	1189	1210	1188	1210	0.88
19	27	2e-05	0.0023	18.8	2.7	1	23	1216	1238	1216	1238	0.98
20	27	0.0026	0.3	12.1	0.5	2	23	1245	1266	1244	1266	0.97
21	27	3.2e-08	3.8e-06	27.6	1.4	2	23	1335	1356	1334	1356	0.98
22	27	0.00063	0.073	14.1	3.8	1	23	1362	1384	1362	1384	0.99
23	27	2.8e-05	0.0033	18.3	2.2	1	23	1390	1412	1390	1412	0.98
24	27	1.8e-05	0.0021	18.9	2.8	1	23	1418	1440	1418	1440	0.98
25	27	9.2e-07	0.00011	23.0	1.6	2	23	1674	1695	1673	1695	0.97
26	27	0.00012	0.014	16.4	5.4	1	23	1701	1723	1701	1723	0.98
27	27	0.0011	0.13	13.3	4.6	1	23	1729	1752	1729	1752	0.97

Sequence Information

Coding Sequence: ATGTCCGCCAACATGTTGACAGAGTCAAAGATAATTATGGACCCTACCTCCGAGTCCAGCGACACACTGCCAGTTAGTTTTATTACCACAGACGACGGTCACATGCTCTTTGCAGTGAGCGAACGTGAGGATGATACACTAGAAATCATGACAACTCCCATCACAGTAATACCACAAAGAAACATAGTGTCTTCGCTGATAAAGACTGTGGATGGGAATTTTATTCTACAATCTCCTATTTTTCAACTGAACGTGGAAGGTGTACCCGAGACGCAACAAACGAATCTTTTGCCAGCTATTCAACACATTGAAAATGTATCTCCAGCTGAACAATTGAAACTAGTGCAGAATGTAAACGAACACAGTGATCTGTCGTTGTTGTGTAGCAGAGATGTTAACGATGTATTGTTGGATAAAGAAGAACAAACCAAAAACGATAATCACGTCAAAGATGATTCTATACGCGCGGATACATCAAGACAGGATGTTCACAGGAGATCTCCTGGCAGACCGAAAAAGATTGGGGACGTGCCAACTCTGAGGTGCGATATATGCGGACAAGAATTTACCAAACAGTTATTGTATCGCAGACATATGGAGAATCACGCGGCGGAAAAACCCCACAGGTGTCCGAAGTGTCCGGCGTCGTTCAACATCCCGCTGAATTTCACGCTTCATATGGCAACGCATAATACCGGCGAGCCGAAGTGTCCCGAGTGCGGCCGGAAATACGCCAGAATGGCGAGTCTCAAGTCCCACATGTTGTTGCACGAAAAGGAGGAGAATCTCTTCTGCGCCGAGTGCGAGGACGGTTTTTCGACAAAGGCCCAATTGGACGCGCATTTAAAACTGCACGAGGAAAAGGCGGCGAACGAGGAAGGAGGCGTGCGAAAGTGTAAATTATGCAACAAACAATTCATGCAACCGGCGCTGTACCGATTACATATTCGGGAGCATTACAGGTTACAGACAAAGATAGCGAAGCAAACGAAGAAAGGGATGAAACACAAGACGGTGTACAAGTGCACGATATGCTTGAAATTCTTTCAAAAACCGAGCCAGCTGATGCGGCACATCAGAGTGCATACCGGAGAAAAACCCTTCAAGTGTGTGATCTGCAACAGGGCGTTCACGCAAAAGAGTTCGCTGCAAATCCATATGTGGCAGCACAACGGCATTCGACCGCACAGTTGCAATCTCTGCACCGCAAAATTTAGTCAAAAAGGAAATCTAAAGGCACATGTACTTAGGGTGCACAGTGCTCCGGAGGGTGAGCCTTCGTACGCTTGTCCTTATTGCGCTTGCATTTTCAAGAAACTGGGCAGTTTAAACGGACACATAAAACGAGTGCATTCTAACGTCTCGGAAGAATCCGGGGCTAAGAAATCCACGGAAACCAACATCACATCGGAAGCCGACATGCGTGCAACGGTCGACAGCGTGATATCGCAACTGGCATCGTTGGAATCCACCGTGAACAATACCGTGGATTCTACCAAGACCGCTGCTGCGTTAAACGCGGAACAAAACGACATTCTGCACCAAGCGTTGAAAAACAGCGATTTGTCGAGTGAAACCAAGGTTACGTCCAAAGAAACTGCGGAATCGAAAAAGACGGAGTCAACGACATACGTCACGATATTGGATAAAACTGCAAACGGTACTTCAAGGAACTTTACCATAAAGCAACATTACATAGGAAACGTACGTTGGTACACGTGTTTGTACTGCCCGAAGGAGTTTAAAAAACCGTCGGATTTAATACGTCATCTGCGTGTCCACACACAGGAGAAACCTTTCAAGTGTATGTACTGCGTGCGATCATTCGCGCTGAAATCGACGATGATAGCGCACGAGCGAACTCACAGCGGATTGAAGAAGTACGCTTGCAATTCCTGCAACAAAAGCTTCGCCTGCCATAATACTCTTACCGCTCATATGAGATTACACACGAAACCACATAAATGTAACATATGCGACATGTCGTTCAGTTCGAGCACCGTTCTCAAAAATCATGTGAAGAGTCACGCGCGAGAGAAACCGAAGATAACGCCTGAGACGGAGAGTCTGATACCGCAGGTGGTGTTGCAGGAGCCGCTCGTCATCAGCGACGCTGACAATAAAATTAGCGTGGCGCAAGTGCAGTCGAAACAGAAACAAATGTACGAGAGCGTCGGCGTGGCCAGGCCACACGAATGTTCCGTCTGTCACGCGGCATTTCGCAAAGTCAGTCACCTGAAGCAACATTTCCGCAGGCATACGGGCGAGCGGCCTTACAAGTGCAACAAATGCGACAGGAGATTCTCGTCCAACAGTGTCCTCAAATCTCATCTGCACACTCACGAAGCTGCGAGACCGTACAGTTGTTCGGTGTGCAACACAAAATTCTCCACGCAGAGCAGCATGAAGAGGCATTTGGTCACGCATAGTAATAAAAGGCCGTTCATGTGTCCATATTGTCACAAAACGTTCAAGACATACGTTAACTGTCGGAAGCATATGAAAATCCATAAACACGAGTTGGCACAGCAGCAATTGGAGGTGCAGAAGACGCAGGAGAAGCAATCTCCAGTCGAGGACAAAGCTACTTCTTCAACATTACCAGAAACTATTACTCTTCCCGAAAATATGGAAGTGTCGTTTCAACAACAAATAGCCTCGGACTTCACGCATGCTTTTTCTGACCAGTTTCAGAACATCAGCACGGATAAGGAGAAAACCTTCTTGTTAACGGACACTATAACATCGACTCAAAATTTATCCGTTGAGGCAACTAATTTGGGCTCAGCGCAAACCTTGCACGCCGACGAAACCGGCACCATTACGTTGCCTCAGTATCCGGGGGATCAAACTTTAACGCCGGAAAACATACGAGAGATCGAGGAAACTTTGAATCAACAGCTGCTTAGTATTGGCATGAATCTCGGGGTGGGAACGAACAATCTCTCGAGACAGATGGACGAGGCGAATATAAGCACTCTCGACGGCGTCAAAGAACAGCCGGTGTTGAACATAATATACGATCACAACAAGACTCTGGACGCATCAGGCAACGCCATTTTCACGCCGCAATTCGACACGTTCGACATAGGTCAAATTACGTTGCAGACGAATAACGAGATGGATGTCGGCTTGAATCCGAGCAACTCCGCGCCAACCATGTCCGGCGTTCCGTCCAAATCTGCAGATGGGAGCAACGGTCAGCAGGAGGAACGAGAAACCGCTTCGATTACCACCGTCAGCAACATAGACGCTTCTCAAGTGATAAAGAACGCTCATCTCATGCTGATAAATCCCAAGGAAAATTGTTCGGAATTGATAAAACTGTCGCACGTGGCTCCGCAAAAGTATTCGAAACCCGCGAAAACGGACACCGCGAACGAAATAGAGATGCAAGTCATCAACGAAGAAGCGCCACAGAAAAGCAACGCTGTTTCGTGCGAGAACGAAAGAAGCCCTTCGTCTTTGTTCATGGAGAACTTTCAAAGTACAATACAGTCGGACATGCTCATCTCCTCTGACATGGATAATCTGACCAAAATGTCCGAGTGCAACACTCTCTTGCAATGTCACATGTGCAACGATCGAGGTTTCACCACGGAAGGATTAAAGGAACACTTGAAATCTCATCGTGGAGCGAAAGAATTCGAATGCTCGGAATGTTCTCAGAGATTCTGCACGAACGGTGGCCTAAGCAGGCACATGAAGATGCACACAAATAAGCAACAGTGGAAATGCACGATCTGTCAGAAGGTGCTGGGCAGCAAGGTGCAATTGAAGCTTCACAGCAAGATGCATACCGAGAGCTGGAACGTCTCGTTCGGCGATAATTCTCCGAAGGAATTCGCTTCGTCCGCTCTTCCGTCATTGACGCTAGATGTGCGAATAGATCCGGATTCGTCGGTGTCCGAGAAAGTTTTGATGGACGCCTTCGCCGAGAAGAAAAGTATAGACCAAGCGGATGAAAATGTGGAAAAGGGAGAAAAGAAGGAATATGTAAATAAATGTAAATACTGTCCGAAAACTTTCCGCAAACCGAGCGACCTTATCAGACACATTCGCACGCACACGGGCGAGCGACCTTACAAATGTACACGGTGCAGCAAGAGTTTTGCGGTCAAGTGCACTCTCGACTCGCACATGAAAGTTCACACGGGTAAGAAGACGTTCCGGTGCCACGTCTGCACCAGCATGTTTGCCACGAAGGGTAGTTTGAAGGTCCACATGCGTCTTCACACGGGCTCCAAACCGTTCAAGTGTCCCATATGTGACATGCGATTCCGCACTTCCGGTCACAAGAAGGTGCACATGCTGAAGCACGCGAGAGAACACAAAGGTGGCACAAAGCGCAAGCCGAAACACGTCAAGTACGCGGCTGTGGCGGAAGCAGCGGCGAGTTGTGAGAAATTCAACAACAGTTCTCCAAATCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCGGTTCAACGCAAAATTTGGACTACTCTTCGGTGGATCATACTGTGAATACCGCGGTTCACTTGCCCGATCAGATTACATTCAATCAGCCCGAGGCAACGACACTTCTCAACAACAACTCCGTGCTGTCAGTGAACGAGAACAACGAGCTGGTGACGAATCTGCAGTTCTTACTGGCAAACGGTTTCGTCACCATCCAGACGGACGACACTCTGCTGAGCGCGCAACCGGCAACGAGCGGTTCAGACACCAGCGGCACCGCGGTGCCAACCAATGTGATCGAATTTGTGAATCCGAATCCTTTCCAAGAAACTTGCAATCTGAGTGATACGAATCACGTGGTGATAACTAGTCAGATACCGGCGACGACAACTGCGAACGACGCGACAGTCATTCAAATGAACGATTGCATATCTTCCATTCCAATGATGCCGATAGAACAGAATCAGGACGCGAACATCAGCGGCGCGTCGTCCGAAACGAAGACAAACACTCAGTCGACGAAATCCTCCAGAAAGGAATGTGATACGTGCGGCAAAACGTTCACGAAGCCGTACCAGTTGGAACGCCACAAACGTAGTCACACGGGCGAGCGGCCGTACAAATGCGAACAGTGCGGCAAGGCGTTCGCTCAGAAGTTCACACTGCATCTTCATCAAAAACATCATACGGGCGATCGTCCATACCCGTGTCCGCACTGCAAGCAATGGTTCTCGCAAAAGTGCAATCTGCAGACGCACTTGAAGCGCGTCCACAAGTTAGTTTTGCTCGACATCAAGAAGCTGAAGAACAATCAGCAGGTGTTGGGCACGCTTCTGCAAGACGGTCAAGGAGACAACGCCAAACTGGTGAACTTGGACGACATACTGGTAGTAGATTTCCTCAAATAA
Protein Sequence: MSANMLTESKIIMDPTSESSDTLPVSFITTDDGHMLFAVSEREDDTLEIMTTPITVIPQRNIVSSLIKTVDGNFILQSPIFQLNVEGVPETQQTNLLPAIQHIENVSPAEQLKLVQNVNEHSDLSLLCSRDVNDVLLDKEEQTKNDNHVKDDSIRADTSRQDVHRRSPGRPKKIGDVPTLRCDICGQEFTKQLLYRRHMENHAAEKPHRCPKCPASFNIPLNFTLHMATHNTGEPKCPECGRKYARMASLKSHMLLHEKEENLFCAECEDGFSTKAQLDAHLKLHEEKAANEEGGVRKCKLCNKQFMQPALYRLHIREHYRLQTKIAKQTKKGMKHKTVYKCTICLKFFQKPSQLMRHIRVHTGEKPFKCVICNRAFTQKSSLQIHMWQHNGIRPHSCNLCTAKFSQKGNLKAHVLRVHSAPEGEPSYACPYCACIFKKLGSLNGHIKRVHSNVSEESGAKKSTETNITSEADMRATVDSVISQLASLESTVNNTVDSTKTAAALNAEQNDILHQALKNSDLSSETKVTSKETAESKKTESTTYVTILDKTANGTSRNFTIKQHYIGNVRWYTCLYCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHSGLKKYACNSCNKSFACHNTLTAHMRLHTKPHKCNICDMSFSSSTVLKNHVKSHAREKPKITPETESLIPQVVLQEPLVISDADNKISVAQVQSKQKQMYESVGVARPHECSVCHAAFRKVSHLKQHFRRHTGERPYKCNKCDRRFSSNSVLKSHLHTHEAARPYSCSVCNTKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQQQLEVQKTQEKQSPVEDKATSSTLPETITLPENMEVSFQQQIASDFTHAFSDQFQNISTDKEKTFLLTDTITSTQNLSVEATNLGSAQTLHADETGTITLPQYPGDQTLTPENIREIEETLNQQLLSIGMNLGVGTNNLSRQMDEANISTLDGVKEQPVLNIIYDHNKTLDASGNAIFTPQFDTFDIGQITLQTNNEMDVGLNPSNSAPTMSGVPSKSADGSNGQQEERETASITTVSNIDASQVIKNAHLMLINPKENCSELIKLSHVAPQKYSKPAKTDTANEIEMQVINEEAPQKSNAVSCENERSPSSLFMENFQSTIQSDMLISSDMDNLTKMSECNTLLQCHMCNDRGFTTEGLKEHLKSHRGAKEFECSECSQRFCTNGGLSRHMKMHTNKQQWKCTICQKVLGSKVQLKLHSKMHTESWNVSFGDNSPKEFASSALPSLTLDVRIDPDSSVSEKVLMDAFAEKKSIDQADENVEKGEKKEYVNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCTRCSKSFAVKCTLDSHMKVHTGKKTFRCHVCTSMFATKGSLKVHMRLHTGSKPFKCPICDMRFRTSGHKKVHMLKHAREHKGGTKRKPKHVKYAAVAEAAASCEKFNNSSPNRXXXXXXXXXXXXXXXXXXXXXXXTGSTQNLDYSSVDHTVNTAVHLPDQITFNQPEATTLLNNNSVLSVNENNELVTNLQFLLANGFVTIQTDDTLLSAQPATSGSDTSGTAVPTNVIEFVNPNPFQETCNLSDTNHVVITSQIPATTTANDATVIQMNDCISSIPMMPIEQNQDANISGASSETKTNTQSTKSSRKECDTCGKTFTKPYQLERHKRSHTGERPYKCEQCGKAFAQKFTLHLHQKHHTGDRPYPCPHCKQWFSQKCNLQTHLKRVHKLVLLDIKKLKNNQQVLGTLLQDGQGDNAKLVNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01269955; iTF_01267005; iTF_01270667;
90% Identity: iTF_01269955; iTF_01267005; iTF_01270667;
80% Identity: -