Basic Information

Insect: Pseudomyrmex gracilis
Gene Symbol: ZNF236
Assembly: GCA_002006095.1
Location: NW:619533-631767[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00013 0.0079 15.9 0.6 2 23 181 202 180 202 0.96

2 27 0.00059 0.035 13.9 0.4 1 23 208 230 208 230 0.98

3 27 2.6e-05 0.0016 18.1 0.3 2 23 236 257 236 257 0.97

4 27 0.04 2.4 8.1 0.1 3 23 265 285 263 285 0.95

5 27 0.00013 0.0079 15.9 0.6 2 23 298 319 298 319 0.98

6 27 2.9e-06 0.00017 21.1 1.4 1 23 340 362 340 362 0.99

7 27 7.2e-06 0.00043 19.9 0.6 1 20 368 387 368 390 0.96

8 27 9.4e-05 0.0056 16.4 1.2 1 23 396 419 396 419 0.95

9 27 0.0024 0.14 12.0 0.6 1 23 428 451 428 451 0.97

10 27 2.3e-07 1.4e-05 24.6 0.5 1 23 571 593 571 593 0.99

11 27 0.00051 0.03 14.1 0.8 1 23 599 621 599 621 0.99

12 27 0.0071 0.42 10.5 4.3 1 23 627 649 627 649 0.97

13 27 7.5e-05 0.0045 16.7 2.3 1 23 653 675 653 675 0.98

14 27 0.0046 0.27 11.1 6.8 1 23 730 752 730 752 0.98

15 27 1.8e-05 0.001 18.7 4.8 1 23 758 780 758 780 0.99

16 27 8.7e-06 0.00052 19.6 2.1 1 23 786 808 786 808 0.98

17 27 0.00034 0.02 14.6 7.6 1 23 814 836 814 836 0.98

18 27 0.34 20 5.2 2.0 2 23 1187 1208 1186 1208 0.93

19 27 1.6e-05 0.00096 18.8 2.7 1 23 1214 1236 1214 1236 0.98

20 27 0.0021 0.13 12.1 0.5 2 23 1243 1264 1242 1264 0.97

21 27 2.6e-08 1.6e-06 27.6 1.4 2 23 1335 1356 1334 1356 0.98

22 27 0.00051 0.03 14.1 3.8 1 23 1362 1384 1362 1384 0.99

23 27 2.3e-05 0.0014 18.3 2.2 1 23 1390 1412 1390 1412 0.98

24 27 1.5e-05 0.00086 18.9 2.8 1 23 1418 1440 1418 1440 0.98

25 27 7.5e-07 4.5e-05 23.0 1.6 2 23 1673 1694 1672 1694 0.97

26 27 9.5e-05 0.0056 16.4 5.4 1 23 1700 1722 1700 1722 0.98

27 27 0.00089 0.053 13.3 4.6 1 23 1728 1751 1728 1751 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00013	0.0079	15.9	0.6	2	23	181	202	180	202	0.96
2	27	0.00059	0.035	13.9	0.4	1	23	208	230	208	230	0.98
3	27	2.6e-05	0.0016	18.1	0.3	2	23	236	257	236	257	0.97
4	27	0.04	2.4	8.1	0.1	3	23	265	285	263	285	0.95
5	27	0.00013	0.0079	15.9	0.6	2	23	298	319	298	319	0.98
6	27	2.9e-06	0.00017	21.1	1.4	1	23	340	362	340	362	0.99
7	27	7.2e-06	0.00043	19.9	0.6	1	20	368	387	368	390	0.96
8	27	9.4e-05	0.0056	16.4	1.2	1	23	396	419	396	419	0.95
9	27	0.0024	0.14	12.0	0.6	1	23	428	451	428	451	0.97
10	27	2.3e-07	1.4e-05	24.6	0.5	1	23	571	593	571	593	0.99
11	27	0.00051	0.03	14.1	0.8	1	23	599	621	599	621	0.99
12	27	0.0071	0.42	10.5	4.3	1	23	627	649	627	649	0.97
13	27	7.5e-05	0.0045	16.7	2.3	1	23	653	675	653	675	0.98
14	27	0.0046	0.27	11.1	6.8	1	23	730	752	730	752	0.98
15	27	1.8e-05	0.001	18.7	4.8	1	23	758	780	758	780	0.99
16	27	8.7e-06	0.00052	19.6	2.1	1	23	786	808	786	808	0.98
17	27	0.00034	0.02	14.6	7.6	1	23	814	836	814	836	0.98
18	27	0.34	20	5.2	2.0	2	23	1187	1208	1186	1208	0.93
19	27	1.6e-05	0.00096	18.8	2.7	1	23	1214	1236	1214	1236	0.98
20	27	0.0021	0.13	12.1	0.5	2	23	1243	1264	1242	1264	0.97
21	27	2.6e-08	1.6e-06	27.6	1.4	2	23	1335	1356	1334	1356	0.98
22	27	0.00051	0.03	14.1	3.8	1	23	1362	1384	1362	1384	0.99
23	27	2.3e-05	0.0014	18.3	2.2	1	23	1390	1412	1390	1412	0.98
24	27	1.5e-05	0.00086	18.9	2.8	1	23	1418	1440	1418	1440	0.98
25	27	7.5e-07	4.5e-05	23.0	1.6	2	23	1673	1694	1672	1694	0.97
26	27	9.5e-05	0.0056	16.4	5.4	1	23	1700	1722	1700	1722	0.98
27	27	0.00089	0.053	13.3	4.6	1	23	1728	1751	1728	1751	0.97

Sequence Information

Coding Sequence: ATGTCCGCCAACATGTTGACAGAGTCGAAGATAATTATGGACCCTACCGAGTCCAGTGATACACTGCCAGTTAGTTTTATTACCACAGACGACGGTCACATGCTCTTTGCAGTGAGCGaacgtGAGGATGATACACTAGAAATCATGACAGCTCCTATCACAGTAATACCACAAAGAAACAGTATAGTATCTTCGCTGATAAAGACTGTGGatggaaattttattttacaatctcCTATTTTTCAACTGAATGTGGAAGGTGTACCTGAGGTGCAACAAACAAATCTCTTGCCGGCGATGCAACAAATCGAAAATGTATCTCAGGTCGAACAATTGAAACTAGTGCAGAATGCAAATGAACACAGTGATCTGTCGTTGTTGTGTGACAGAGATGTTAATGATGCGTTGTCAGATAAGGAAGAACAGACAAAAAACGATAATCAAGTCAAAGATAATTCTATACATGTGGATGTATCCAGACAGGATGTTCACAGGAGATCTCCTGGCAGACCGAAAAAGATTGGGGACATGCCATCGCTGAGGTGCGATATATGCGGACAAGAATTTACCAAACAGTTATTGTATCGCAGACATATGGAGAATCACGCGGCGGAAAAACCCCACAGGTGTCCAAAATGTCCGGCATCGTTCAATATCCCGTTGAATTTCACGCTTCACATGGCAACGCATAATACCGGCGAGCCGAAGTGTCCCGAGTGCGGCAGGAAATACGCCAGAATGGCGAGTCTCAAGTCTCACATGTTGTTGCACGAAAAGGAGGAGAATCTCTTCTGTGCCGAGTGCGAGGACGGATTTTCGACAAAGGCCCAGTTGGACGCGCACTTGAAACTGCACGAGGAAAAAGGGGCAAATGAGGAAGGAGGCGTGCGAAAGTGTAAATTGTGCAACAAACAATTCGTGCAACCCGCGCTGTACCGATTACACATTCGGGAGCATTATAGGCTACAGACAAAGATAGCAAAGCAAACCAAGAAAGGGATGAAACACAAGACAGTGTACAAGTGTACGATATGCTTGAAATTCTTTCAAAAACCGAGCCAGCTGATGCGACATATCAGGGTGCATACCGGAGAAAAACCCTTCAAGTGTGTGATCTGCAACAGGGCGTTCACGCAAAAGAGTTCGCTGCAAATCCATATGTGGCAGCACAATGGCATTCGACCGCACAGCTGCAATCTCTGCACTGCAAAATTTAGTCAAAAAGGAAATTTGAAGGCACATGTACTTAGGGTGCACAGTGCTCCGGAGGGTGAACCTTCGTACGCTTGTCCTTATTGCGCTTGCATTTTCAAGAAGCTGGGTAGTTTGAACGGGCACATCAAACGAGTGCATTCTAACGTCTCGGAAgaATCCGCGGCTAAGAAATCCGCGGAAACTAATATCACATCGGAAGCCGACATGCGCGCGACGGTCGACAGCGTGATATCGCAACTGGCGTCGTTGGAATCCACCGTGAATAACACCGCGGATTCTACTAAGACGACTGTGTTAAATGCGGAACAAAACGACATTCTGCACCAAGCGTTGAAAAACAGCGATCTGTCAAATGAAACCAAGGTCACGTCCAAAGAAACCGCGGAATCGAAAAAGACGGAGTCAACGACATACGTCACGATATTGGATAAAACTGCAAACGGCACTTCAAGAAATTTTACCATAAAGCAACATTACATAGGAAACGTACGTTGGTACACGTGTCTGTACTGCCCGAAGGAGTTTAAAAAACCATCGGATTTAATACGTCATCTGCGTGTCCACACGCAGGAGAAACCCTTCAagTGTATGTACTGCGTGCGATCCTTCGCGTTGAAATCGACGATGATAGCGCACGAGCGAACTCACAGCGGATTGAAGAAGTACGCTTGCAATTCTTGCAACAAAAGCTTCGCGTGCCACAACACTCTTACTGCTCATATGAGatTGCACACGAAACCACATAAATGTAACGTATGCGACATGTCGTTCAGTTCGAGCAACGTTTTGAAGAATCATGTCAAGAGtcacgcgcgagagaagtcAAAGATATCGCCTGAAACGGAGAGTTTAATGCCGCAGGTGGTGTTGCAGGAGCCGCTCGTTATCAGTGACgctgataataaaattagcGTGGCGCAAGTGCAATCGAAACAGAAACAAATGTACGAGAGCGTCGGCGTGGCCAGACCGCACGAATGTTCCGTCTGCCACGCGGCATTTCGCAAAGTCAGTCACTTGAAGCAACATTTTCGCAGGCATACGGGCGAGCGGCCCTACAAGTGCAACAAATGCGACAGGAGATTCTCGTCCAACAGTGTTCTCAAATCTCATCTGCACACTCACGAAGCTGCGAGACCGTACAGCTGTTCGGTATGCAACACAAAATTCTCGACGCAGAGCAGCATGAAGAGGCATTTGGTCACGCATAGCAATAAAAGACCGTTTATGTGTCCCTATTGTCACAAGACGTTCAAGACGTACGTTAATTGTCGGAAGCATatgaaaatacacaaacacGAGTTGGCACAGCAGCAATTGGAGGTGCAAAAGACGCAGGAGAAGCAATCTCCAGTCGAGGACAAAGCTACTTCTTCAACATTACCAGAAACCATTACCCTTCCTGAAAACATGGAAGTGTCGTTTCAACAACAAATAGCCTCGGACTTCACGCATGCTTTTTCTGACCAGTTTCAGAACATCAGCACGGATAAAGAGAAAACCTTCTTGCTAACGGATACTATAACATCGACTcaaaatTTATCCGTTGAGACGACTAATTTGGGCTCATCGCAAACCTTACACGCCGACGAAACCGGCACCATTACGTTACCTCAGTATCCAGGGGATCAAACTTTAACGCCGGAAAACATACGAGAGATCGAGGAAACTTTGAATCAACAATTGTTTAGTATCGGGATGAATCTCGGGGTGGGAGCGAACAATCTGTCGAGACAGATTGACGAGGCGAATATAAGCACTCTCGACGGTGTCAAAGAACAGCCGGTGTTGAACATAATATACGATCACAACAAGACTCTGGACGCATCGGGCAACGCCATTTTCACGCCGCAATTCGACACGTTCGACATTGGTCAAATTACGTTGCAgACGAATAACGAGATGGATATCGGATTGAATCCGAGCAACTCCGCGCCAACCATGTCCGACGTTTCGCCCAAATCTGCAAATGGGAGCAACGGTCAGCAGGAGGAACGAGAAGCCGCTTCGGTCACCACCGCGGTCAGCAACATAGACGCTTCCCAAGTGATAAAGAACGCTCATCTCATGCTGATAAATCCCAAGGAAAATTGTTCGGAATTGATAAAACTGTCGCACGTGCCTTcacaaaaatattcgaaacCCGCGAAAATGGACACCGAAATAGAGATGCAAGTCATCAGCGAAGAAGCGCCACAGAAAACTAACGCTGTTTCGTGCGAAAACGAAAGAAGCCCCTCGTCCCTGTTCATAGAGAACTTTCAAAGTACAATACAGTCGGACATGCTCATCTCCTCTGATATGGATAATCTGACCAAAATGTCGGAGTGCAACACACTGTTGCAATGTCACATGTGCAACAATCGAGGTTTCACCACGGAAGGATTAAAGGAACACTTGAAATCTCATCGCGGAGCGAAAGAATTCGAGTGCTCGGAATGTTCTCAGAGATTCTGCACGAACGGTGGCCTCAGCAGACACATGAAGATGCACACAAATAAGCAACAGTGGAAATGCACGATCTGTCAGAAGGTGCTGGGCAGCAAGGTGCAATTGAAGCTTCACAGCAAGATGCATACCGAGGGCTGGAACGTCTCGTTCGTCGATGGTGATAATTCTCAGAAGGAATTTGTTTCGTCCGCTCTTCCGTCGATGACACTAGACGTGCGAATAGATCCGGATTCGTCGGTGTCCGAGAAAGTTTTGATGGACGCCTTCGCCGAGAAGAAAAGTATAGACCAAGCGGatGAAAATGTGGAAAAGGGAGAAAAGAAggaatatgtaaataaatgtaaatactGTCCGAAAACTTTCCGCAAACCGAGCGACCTTATCAGACACATTCGCACGCACACGGGCGAGCGACCGTACAAGTGTACACGCTGCAGTAAGAGTTTTGCGGTCAAGTGCACTCTCGACTCGCACATGAAAGTTCATACTGGTAAGAAGACGTTCCGCTGCCACGTCTGCACCAGCATGTTTGCCACGAAAGGTAGTCTGAAGGTTCACATGCGTCTGCACACGGGCTCCAAACCGTTCAAGTGTCCCATATGTGACATGCGATTTCGCACTTCCGGTCACAAGAAGGTGCACATGCTGAAGCACGCGAGAGAGCACAAAGGTGGCACAAAGCGCAAGCCAAAACACGTCAAGTACGCGGCTGTGGCGGAAGCAGCGGCGAGTTTTGAGAAATTCGACAACAGTTCTCCAAATTGTACAGCAACGGAGACGGCAacggcaacgacgacgacaacggcgACGACTGTGATGAGCGAAACCGCTCCAACGCAAAATCTGGACTACTCTTCGGTGGAGCATACTGTGAACAATCTCGATACCGCGGTTCACTTGCCAGATCAGATTACATTTAATCAGCCCGAAGGAACAACACTTCTCAACAACAACTCCGTGCTATCGGTGAACGAGAACAACGAGCTGGTGACGAATCTGCAGTTCTTACTGGCAAACGGTTTCGTCACCATTCAGACAGACGACGCTCTGCTGAGCGCGCAACCGGCAACAAACAGCTCAGACACCAGCGGCACCGCGGTCCCAACCAATGTGATCGAATTTGTGAATCCGAATTCTTACCAAGAAACTTGCAATCTGGATGATACGAATCACGTGGTGATAACTAGTCAGATACCGGCGACGACAACTGCAAACGACGCGACCGTCATCCAAATGAACGATTGCATGTCTTCCATTCCAATGATGCCGATTGAACAGAATCAAGACGCGAACAGCGGCGTCGCGTCCGAAACGAAGACAAACACTCAGTCGACGAAATCCTCTAGAAAGGAATGTGATACGTGCGGCAAAACGTTCACGAAGCCGTACCAGTTGGAACGTCATAAACGTAGCCACACGGGCGAGCGGCCGTACAAATGCGAACAGTGCGGCAAGGCGTTCGCTCAGAAGTTCACGCTGCATCTTCATCAAAAACATCACACCGGCGATCGACCGTATCCCTGCCCCCACTGCAAGCAATGGTTCTCGCAAAAGTGCAATCTGCAGACGCACTTGAAGCGGGTCCACAAGTTGGTTTTTTTTGACATCAAGAAGCTGAAGAACAATAATCAGCAGGTATTGGGTACGCTTCTGCAGGACAGTCAAGGAGACAACGCCAAACTGGTGAATTTGGACGACATACTGGTAGTAGATTTCCCCAAATAA
Protein Sequence: MSANMLTESKIIMDPTESSDTLPVSFITTDDGHMLFAVSEREDDTLEIMTAPITVIPQRNSIVSSLIKTVDGNFILQSPIFQLNVEGVPEVQQTNLLPAMQQIENVSQVEQLKLVQNANEHSDLSLLCDRDVNDALSDKEEQTKNDNQVKDNSIHVDVSRQDVHRRSPGRPKKIGDMPSLRCDICGQEFTKQLLYRRHMENHAAEKPHRCPKCPASFNIPLNFTLHMATHNTGEPKCPECGRKYARMASLKSHMLLHEKEENLFCAECEDGFSTKAQLDAHLKLHEEKGANEEGGVRKCKLCNKQFVQPALYRLHIREHYRLQTKIAKQTKKGMKHKTVYKCTICLKFFQKPSQLMRHIRVHTGEKPFKCVICNRAFTQKSSLQIHMWQHNGIRPHSCNLCTAKFSQKGNLKAHVLRVHSAPEGEPSYACPYCACIFKKLGSLNGHIKRVHSNVSEESAAKKSAETNITSEADMRATVDSVISQLASLESTVNNTADSTKTTVLNAEQNDILHQALKNSDLSNETKVTSKETAESKKTESTTYVTILDKTANGTSRNFTIKQHYIGNVRWYTCLYCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHSGLKKYACNSCNKSFACHNTLTAHMRLHTKPHKCNVCDMSFSSSNVLKNHVKSHAREKSKISPETESLMPQVVLQEPLVISDADNKISVAQVQSKQKQMYESVGVARPHECSVCHAAFRKVSHLKQHFRRHTGERPYKCNKCDRRFSSNSVLKSHLHTHEAARPYSCSVCNTKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQQQLEVQKTQEKQSPVEDKATSSTLPETITLPENMEVSFQQQIASDFTHAFSDQFQNISTDKEKTFLLTDTITSTQNLSVETTNLGSSQTLHADETGTITLPQYPGDQTLTPENIREIEETLNQQLFSIGMNLGVGANNLSRQIDEANISTLDGVKEQPVLNIIYDHNKTLDASGNAIFTPQFDTFDIGQITLQTNNEMDIGLNPSNSAPTMSDVSPKSANGSNGQQEEREAASVTTAVSNIDASQVIKNAHLMLINPKENCSELIKLSHVPSQKYSKPAKMDTEIEMQVISEEAPQKTNAVSCENERSPSSLFIENFQSTIQSDMLISSDMDNLTKMSECNTLLQCHMCNNRGFTTEGLKEHLKSHRGAKEFECSECSQRFCTNGGLSRHMKMHTNKQQWKCTICQKVLGSKVQLKLHSKMHTEGWNVSFVDGDNSQKEFVSSALPSMTLDVRIDPDSSVSEKVLMDAFAEKKSIDQADENVEKGEKKEYVNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCTRCSKSFAVKCTLDSHMKVHTGKKTFRCHVCTSMFATKGSLKVHMRLHTGSKPFKCPICDMRFRTSGHKKVHMLKHAREHKGGTKRKPKHVKYAAVAEAAASFEKFDNSSPNCTATETATATTTTTATTVMSETAPTQNLDYSSVEHTVNNLDTAVHLPDQITFNQPEGTTLLNNNSVLSVNENNELVTNLQFLLANGFVTIQTDDALLSAQPATNSSDTSGTAVPTNVIEFVNPNSYQETCNLDDTNHVVITSQIPATTTANDATVIQMNDCMSSIPMMPIEQNQDANSGVASETKTNTQSTKSSRKECDTCGKTFTKPYQLERHKRSHTGERPYKCEQCGKAFAQKFTLHLHQKHHTGDRPYPCPHCKQWFSQKCNLQTHLKRVHKLVFFDIKKLKNNNQQVLGTLLQDSQGDNAKLVNLDDILVVDFPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01268436;
90% Identity: iTF_01268436;
80% Identity: -