Basic Information

Insect: Pseudomyrmex flavicornis
Gene Symbol: ZNF236
Assembly: GCA_014825475.1
Location: QVNW01000567.1:4797-16748[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.00016 0.017 15.9 0.6 2 23 181 202 180 202 0.96

2 26 0.00071 0.076 13.9 0.4 1 23 208 230 208 230 0.98

3 26 3.2e-05 0.0034 18.1 0.3 2 23 236 257 236 257 0.97

4 26 0.048 5.1 8.1 0.1 3 23 265 285 263 285 0.95

5 26 0.00016 0.017 15.9 0.6 2 23 298 319 298 319 0.98

6 26 3.5e-06 0.00037 21.1 1.4 1 23 340 362 340 362 0.99

7 26 8.8e-06 0.00093 19.9 0.6 1 20 368 387 368 390 0.96

8 26 0.00011 0.012 16.4 1.2 1 23 396 419 396 419 0.95

9 26 0.0029 0.31 12.0 0.6 1 23 428 451 428 451 0.97

10 26 2.8e-07 2.9e-05 24.6 0.5 1 23 572 594 572 594 0.99

11 26 0.00062 0.066 14.1 0.8 1 23 600 622 600 622 0.99

12 26 0.01 1.1 10.2 3.2 1 23 628 650 628 650 0.97

13 26 4.5e-05 0.0048 17.7 2.4 1 23 654 676 654 676 0.98

14 26 0.0056 0.59 11.1 6.8 1 23 731 753 731 753 0.98

15 26 2.1e-05 0.0023 18.7 4.8 1 23 759 781 759 781 0.99

16 26 1.1e-05 0.0011 19.6 2.1 1 23 787 809 787 809 0.98

17 26 0.00041 0.043 14.7 7.6 1 23 815 837 815 837 0.98

18 26 1 1.1e+02 3.9 1.7 2 23 1191 1212 1190 1212 0.88

19 26 2e-05 0.0021 18.8 2.7 1 23 1218 1240 1218 1240 0.98

20 26 3.2e-08 3.4e-06 27.6 1.4 2 23 1327 1348 1326 1348 0.98

21 26 0.00062 0.066 14.1 3.8 1 23 1354 1376 1354 1376 0.99

22 26 2.8e-05 0.003 18.3 2.2 1 23 1382 1404 1382 1404 0.98

23 26 1.8e-05 0.0019 18.9 2.8 1 23 1410 1432 1410 1432 0.98

24 26 9.1e-07 9.7e-05 23.0 1.6 2 23 1669 1690 1668 1690 0.97

25 26 0.00011 0.012 16.4 5.4 1 23 1696 1718 1696 1718 0.98

26 26 5.4e-05 0.0057 17.4 8.0 1 23 1724 1747 1724 1747 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.00016	0.017	15.9	0.6	2	23	181	202	180	202	0.96
2	26	0.00071	0.076	13.9	0.4	1	23	208	230	208	230	0.98
3	26	3.2e-05	0.0034	18.1	0.3	2	23	236	257	236	257	0.97
4	26	0.048	5.1	8.1	0.1	3	23	265	285	263	285	0.95
5	26	0.00016	0.017	15.9	0.6	2	23	298	319	298	319	0.98
6	26	3.5e-06	0.00037	21.1	1.4	1	23	340	362	340	362	0.99
7	26	8.8e-06	0.00093	19.9	0.6	1	20	368	387	368	390	0.96
8	26	0.00011	0.012	16.4	1.2	1	23	396	419	396	419	0.95
9	26	0.0029	0.31	12.0	0.6	1	23	428	451	428	451	0.97
10	26	2.8e-07	2.9e-05	24.6	0.5	1	23	572	594	572	594	0.99
11	26	0.00062	0.066	14.1	0.8	1	23	600	622	600	622	0.99
12	26	0.01	1.1	10.2	3.2	1	23	628	650	628	650	0.97
13	26	4.5e-05	0.0048	17.7	2.4	1	23	654	676	654	676	0.98
14	26	0.0056	0.59	11.1	6.8	1	23	731	753	731	753	0.98
15	26	2.1e-05	0.0023	18.7	4.8	1	23	759	781	759	781	0.99
16	26	1.1e-05	0.0011	19.6	2.1	1	23	787	809	787	809	0.98
17	26	0.00041	0.043	14.7	7.6	1	23	815	837	815	837	0.98
18	26	1	1.1e+02	3.9	1.7	2	23	1191	1212	1190	1212	0.88
19	26	2e-05	0.0021	18.8	2.7	1	23	1218	1240	1218	1240	0.98
20	26	3.2e-08	3.4e-06	27.6	1.4	2	23	1327	1348	1326	1348	0.98
21	26	0.00062	0.066	14.1	3.8	1	23	1354	1376	1354	1376	0.99
22	26	2.8e-05	0.003	18.3	2.2	1	23	1382	1404	1382	1404	0.98
23	26	1.8e-05	0.0019	18.9	2.8	1	23	1410	1432	1410	1432	0.98
24	26	9.1e-07	9.7e-05	23.0	1.6	2	23	1669	1690	1668	1690	0.97
25	26	0.00011	0.012	16.4	5.4	1	23	1696	1718	1696	1718	0.98
26	26	5.4e-05	0.0057	17.4	8.0	1	23	1724	1747	1724	1747	0.97

Sequence Information

Coding Sequence: ATGTCCGCCAACATGTTGACAGAATCAAAGATAATTATGGATCCTACGTCCGAGTCCAGTGATACACTGCCAGTTAGTTTTATTACCACAGACGACGGTCACATGCTCTTTGCAGTGAGCGAACGTGAGGATGATACATTAGAAATCATGACAACTCCCATCACAGTAATACCACAAAGAAACATAGTGTCCTCGCTGATAAAGACTGTGGATGGAAATTTTATTCTACAATCTCCTATTTTCCAACTGAATGTGGAAGGTGTACCTGAGACGCAACAAACGAATCTTTTGCCAGCGATGCAACACATTGAAAATGTATCTTCGGTTGAGCAATTGAAACTGGTGCAGAATGTAAACGAACACAGTGATCTGTCGTTGTTGTGTAGCAGAGATGTTAACGATGTGTTGTTAGACAAAGAAGAACAGACAAAAAACGATAATCACGTCAAAGATGATTCTATACGCATGGATACATCAAGACAGAATGTTCACAGGAGATCTCCTGGCAGACCGAAAAAGATTGGGGACGTGCCATCTCTGAGATGCGATATATGCGGACAAGAATTTACCAAACAGTTATTGTATCGCAGACATATGGAGAATCACGCGGCGGAAAAACCCCACAGGTGTCCAAAGTGTCCGGCATCGTTCAACATTCCGTTGAATTTCACGCTTCATATGGCAACGCACAATACCGGCGAGCCGAAGTGTCCCGAGTGCGGCAGGAAATACGCGAGAATGGCGAGTCTCAAATCCCACATGTTGTTGCACGAAAAGGAGGAGAATCTCTTTTGCGCCGAGTGCGAGGACGGCTTTTCGACAAAGGCTCAATTGGACGCGCACTTAAAACTGCACGAGGAAAGGGGGGCGAACGAAGAAGGAGGCGTGCGAAAGTGTAAATTATGTAACAAACAATTCGTGCAACCGGCGTTGTACCGATTACATATTCGGGAGCATTACAGGTTACAGACAAAGATAGCAAAGCAAACGAAGAAAGGGATGAAACACAAGACGATATACAAGTGCACGATATGCTTGAAATTCTTTCAAAAACCGAGTCAACTGATGCGGCACATCAGGGTGCATACCGGAGAAAAACCCTTCAAGTGTGTGATCTGCAACAGGGCGTTCACGCAAAAGAGTTCGCTGCAAATCCATATGTGGCAGCACAATGGCATTCGACCGCACAGTTGCAATCTCTGCACCGCAAAATTTAGTCAAAAAGGAAATCTAAAGGCACATGTACTTAGGGTGCACAGTGCGCCGGAGGGTGAGCCTTCGTACGCTTGTCCTTATTGCGCTTGCATTTTCAAGAAACTGGGCAGTTTAAACGGACACATAAAACGAGTGCATTCTAACGTCTCGGAAGAATCAGCGGCTAAGAAATCCACGGAAACTAATATCACATCGGACGCTGACATGCGTGCAACGGTCGACAGCGTGATATCGCAACTGGCATCGTTGGAATCCACCGTGAACAATACCGTGGATCCCGCCAAGACCGCTGATGCGTTAAACGCGGAACAAAACGACATTCTGCACCAAGCGTTGAAAAACAGCGATTTGTCAAGTGAAACCAAGGTTACGTCCAAAGAAACTGCGGAATCGAAAAAGACGGAATCAACGACATACGTCACGATATTGGATAAAACTACAAACGGTGCTTTAAGGAACTTTACCATAAAGCAACATTACATAGGAAACGTACGTTGGTATACGTGCTTGTACTGCCCGAAGGAGTTTAAAAAACCGTCGGATTTAATACGTCATCTGCGTGTCCACACACAGGAGAAACCCTTCAAGTGTATGTACTGCGTGCGATCCTTCGCGCTGAAATCGACGATGATAGCGCACGAGCGAACTCACAGCGGATTGAAGAAATACGCTTGCAATTCCTGCAACAAAAGCTTCGCATGCCATAATACTCTTGCCGCTCATATGAGATTACACACGAAACCACATAAATGTAACATATGCGACATGTCGTTCAGTTCGAGCACCGTTCTCAAGAATCATGTCAAGAGTCACGCGCGAGAGAAGCCGAAGATAACGCCCGAGACGGAAAGTTTGATACCGCAGGTAGTGTTGCAGGAGCCGCTCGTCATCAGCGACACTGATAACAAAATTAGCGTGGCGCAAGTGCAGTCGAAACAGAAACAAATGTACGAGAGCGTCGGCGTAGCCAGACCGCACGAATGTTCCGTCTGTCACGCGGCATTTCGCAAGGTCAGTCACCTGAAGCAACATTTCCGCAGGCATACGGGCGAACGGCCTTACAAGTGCAACAAATGCGACAGGAGATTTTCGTCCAATAGCGTTCTCAAATCTCATCTGCACACTCACGAAGCTGCGAGACCGTACAGTTGTTCAGTGTGTAACACAAAATTCTCCACGCAGAGCAGCATGAAGAGGCATTTGGTCACGCATAGTAATAAAAGGCCGTTCATGTGTCCATATTGTCACAAAACGTTCAAGACGTACGTTAACTGTCGGAAGCATATGAAAATCCACAAACACGAATTGGCTCAGCAGCAATTGGAGGTGCAAAAGACGCAGGAGAAGCAATCTCCAGTCGAGAACAAAGCTGCTTCTTCAACATTACCGGAAACTATTAGCCTTCCTGAAAATATGGAAGTGTCGTTCCAACAACAAATAGCTTCAGACTTCACGCATGCTTTTTCCGACCAGTTTCAGAACATCAGCACGGATAAGGAGAAAACTTTCTTGTTAACGGATACTATAACATCGACTCAAAATTTATCCGTTGAGGCAACTAATTTGGGCTCAGCGCAAACCTTACACGCCGACGAAACCGGCACCATTACGTTGCCCCAGTATCCGGGGGATCAAACTTTAACGCCGGAAAACATACGAGAGATCGAGGAAACTTTGAATCAACAATTGTTTAATATTGGCATGAATCTCGGGGTGGGAACGAACAATCTTTCGAGACAGATGGACGAGGCGAATATAAGCACTCTCGACGGCGTCAAAGAACAGCCGGTGTTGAACATAATATACGATCACAACAAGACTCTGGACGCGTCGGGCAACGCCATTTTCACGCCGCAATTCGACACGTTCGACATAGGTCAAATTACGTTGCAGACGAATAACGAGATGGATATCGGCTTGAATCCGAGCAACTCCGCGCCAACCAACATATCCGGCGTCCCGTCCAAATCTGCAGACGGGAGCAGCAACGGTCAGCAGGAGGAACGAGAAACCGCTTCGGTTACCACCGTCAGTAACATAGACACTTCTCAAGTGATAAAGAACGCCCATCTCATGCTGATAAACCCCAAGGAAAATTGTTCGGAATTGATAAAACTGTCGCACGTGTCTTCGCAAAAGTATTCGAAACCCGCGAAAACAGACACCGCGAACGAAATAGAGTTGCAAGTCATCAACGAGGAAGCGCCACAGAAAAGTAACGCTGTTTCGTGCGAGAACGAAAGAAGCCCTTCGTCTCTGTTCATGGAGAACTTTCAAAGTACAATACAATCGGACATGCTCATCTCCTCTGACATGGATAATCTGACCAAAATGTCGGAATGCAACACTCTGTTGCAGTGTCACATGTGCAACGATCGAGGTTTCACCACGGAAGGATTAAAGGAACACTTGAAATCTCATCGCGGAGCGAAAGAATTCGAATGCTCGGAATGTTCTCAGAGATTCTGCACGAACGGCGGCCTCAGCAGGCACATGAAGATGCACACAAATAAGCACAAGGTGCAATTGAAGCTTCACAGCAAGATGCATACCGAGGGCTGGAACGTCGTCTCGTACGTCGATGATGATAATTCTCCGAAGGAATTCGTCGCGTCCGCACTTCCGTCAATAACGCTAGACGTGCGAATAGATTCGGACTCGTCGGTGTCCGAGAAAGTTTTGATGGACGCCTTCGCCGAGAAGAAAAGTATAGACCAAGCGGATGAAAATGTGGAAAAGGGAGAAAAGAAAGAATATGTAAATAAATGTAAATACTGTCCGAAAACTTTCCGCAAACCGAGCGACCTTATCAGACACATTCGCACGCACACGGGCGAGCGACCGTACAAGTGTACACGCTGCAGCAAGAGTTTTGCGGTCAAGTGCACTCTCGACTCGCACATGAAAGTTCACACGGGTAAGAAGACGTTCCGCTGCCACGTCTGCACCAGCATGTTTGCCACGAAGGGTAGTTTAAAGGTCCACATGCGTTTGCACACGGGCTCCAAACCGTTCAAGTGTCCCATATGTGACATGCGATTCCGCACTTCCGGTCACAAAAAGGTGCACATGCTGAAGCACGCGAGAGAACACAAAGGTGGCACAAAGCGCAAGCCAAAACACGTTAAGTACGCGGCTGTGGCGGAAGCAGCGGCGAGTTGTGAGAAATTCGACAACAATTCTCCAAATCGCACGGCAACGGAGACGACAACAACGGCGATAGCGGCTACGGCAACGACAACAACGACTGTGACAAACGAAACCGCTCCAACGCAAAATTTAGATTATTCTTCGGTGGAGCATACTGTGAATCTTGATACCGCGGTTCATTTGCCCGATCAGATTACATTTAATCAGTCCGAGACAACGACACTTCTCAATAACAACTCCGTGCTGTCAGTGAACGAGAACAACGAGCTGGTGACGAATCTGCAGTTCTTACTGGCAAACGGTTTCGTCACCATCCAGACGGACGACACTCTGCTGAGCGCGCAACCGGCAACGAGCACCTCAGACACCAGCAACACCGCGGTGCCAACCAATGTGATCGAATTTGTGAATCCGAATCCTTTCCAAGAAACTTGCAATCTGAGTGATACGAATCACGTGGTAATAACTAGTCAGATACCGGCGACGACAACCGCGAACGACGCGACGGTCATTCAAATGAACGATTGCATGTCTTCCATTCCAATGATGTCGATAGAACAGAATCAAGACGCGAACATCAGCGGCGCGTTGTCCGAAACGAAGATAAACAACGCTCAGTCGACGAAATCCTCCAGAAAGGAATGTGACACGTGCGGCAAAACGTTCACGAAGCCGTACCAGTTGGAACGCCACAAGCGCAGTCACACGGGCGAGCGGCCGTACAAATGCGAACAGTGCGGCAAGGCATTCGCTCAGAAGTTCACGCTGCATCTTCATCAAAAACATCACACCGGCGATCGACCGTATCCGTGTCCGCACTGCAAGCAATGCTTCTCGCAAAAGTGCAATCTGCAGACGCACTTGAAGCGCGTCCACAAGTTAGTTTTGCTCGACATCAAGAAGCTGAAGAACAATCAGCAGGTGTTAAGCACGTTTCTGCAAGACGGTCAAGGAGACAACGCGAAACTGGTGAACTTGGACGACATACTGGTAGTAGATTTCCTCAAATAA
Protein Sequence: MSANMLTESKIIMDPTSESSDTLPVSFITTDDGHMLFAVSEREDDTLEIMTTPITVIPQRNIVSSLIKTVDGNFILQSPIFQLNVEGVPETQQTNLLPAMQHIENVSSVEQLKLVQNVNEHSDLSLLCSRDVNDVLLDKEEQTKNDNHVKDDSIRMDTSRQNVHRRSPGRPKKIGDVPSLRCDICGQEFTKQLLYRRHMENHAAEKPHRCPKCPASFNIPLNFTLHMATHNTGEPKCPECGRKYARMASLKSHMLLHEKEENLFCAECEDGFSTKAQLDAHLKLHEERGANEEGGVRKCKLCNKQFVQPALYRLHIREHYRLQTKIAKQTKKGMKHKTIYKCTICLKFFQKPSQLMRHIRVHTGEKPFKCVICNRAFTQKSSLQIHMWQHNGIRPHSCNLCTAKFSQKGNLKAHVLRVHSAPEGEPSYACPYCACIFKKLGSLNGHIKRVHSNVSEESAAKKSTETNITSDADMRATVDSVISQLASLESTVNNTVDPAKTADALNAEQNDILHQALKNSDLSSETKVTSKETAESKKTESTTYVTILDKTTNGALRNFTIKQHYIGNVRWYTCLYCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHSGLKKYACNSCNKSFACHNTLAAHMRLHTKPHKCNICDMSFSSSTVLKNHVKSHAREKPKITPETESLIPQVVLQEPLVISDTDNKISVAQVQSKQKQMYESVGVARPHECSVCHAAFRKVSHLKQHFRRHTGERPYKCNKCDRRFSSNSVLKSHLHTHEAARPYSCSVCNTKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQQQLEVQKTQEKQSPVENKAASSTLPETISLPENMEVSFQQQIASDFTHAFSDQFQNISTDKEKTFLLTDTITSTQNLSVEATNLGSAQTLHADETGTITLPQYPGDQTLTPENIREIEETLNQQLFNIGMNLGVGTNNLSRQMDEANISTLDGVKEQPVLNIIYDHNKTLDASGNAIFTPQFDTFDIGQITLQTNNEMDIGLNPSNSAPTNISGVPSKSADGSSNGQQEERETASVTTVSNIDTSQVIKNAHLMLINPKENCSELIKLSHVSSQKYSKPAKTDTANEIELQVINEEAPQKSNAVSCENERSPSSLFMENFQSTIQSDMLISSDMDNLTKMSECNTLLQCHMCNDRGFTTEGLKEHLKSHRGAKEFECSECSQRFCTNGGLSRHMKMHTNKHKVQLKLHSKMHTEGWNVVSYVDDDNSPKEFVASALPSITLDVRIDSDSSVSEKVLMDAFAEKKSIDQADENVEKGEKKEYVNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCTRCSKSFAVKCTLDSHMKVHTGKKTFRCHVCTSMFATKGSLKVHMRLHTGSKPFKCPICDMRFRTSGHKKVHMLKHAREHKGGTKRKPKHVKYAAVAEAAASCEKFDNNSPNRTATETTTTAIAATATTTTTVTNETAPTQNLDYSSVEHTVNLDTAVHLPDQITFNQSETTTLLNNNSVLSVNENNELVTNLQFLLANGFVTIQTDDTLLSAQPATSTSDTSNTAVPTNVIEFVNPNPFQETCNLSDTNHVVITSQIPATTTANDATVIQMNDCMSSIPMMSIEQNQDANISGALSETKINNAQSTKSSRKECDTCGKTFTKPYQLERHKRSHTGERPYKCEQCGKAFAQKFTLHLHQKHHTGDRPYPCPHCKQCFSQKCNLQTHLKRVHKLVLLDIKKLKNNQQVLSTFLQDGQGDNAKLVNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01268436;
90% Identity: iTF_01268436;
80% Identity: -