Basic Information

Insect: Pseudomyrmex concolor
Gene Symbol: ZNF236
Assembly: GCA_014839585.1
Location: QVOB01004463.1:2435-9192[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 2.8e-06 0.00031 21.4 1.4 1 23 54 76 54 76 0.99

2 22 6.9e-06 0.00078 20.2 0.6 1 20 82 101 82 104 0.96

3 22 2.8e-05 0.0032 18.2 1.2 1 23 110 133 110 133 0.96

4 22 0.0022 0.25 12.2 0.6 1 23 142 165 142 165 0.97

5 22 2.2e-07 2.4e-05 24.9 0.5 1 23 286 308 286 308 0.99

6 22 0.00049 0.055 14.3 0.8 1 23 314 336 314 336 0.99

7 22 0.0067 0.76 10.7 4.3 1 23 342 364 342 364 0.97

8 22 6e-05 0.0068 17.2 1.7 1 23 368 390 368 390 0.98

9 22 0.0044 0.49 11.3 6.8 1 23 445 467 445 467 0.98

10 22 1.7e-05 0.0019 18.9 4.8 1 23 473 495 473 495 0.99

11 22 8.3e-06 0.00093 19.9 2.1 1 23 501 523 501 523 0.98

12 22 0.00032 0.036 14.9 7.6 1 23 529 551 529 551 0.98

13 22 0.81 91 4.2 1.7 2 23 904 925 903 925 0.88

14 22 1.5e-05 0.0017 19.1 2.7 1 23 931 953 931 953 0.98

15 22 0.002 0.23 12.4 0.5 2 23 960 981 959 981 0.97

16 22 2.5e-08 2.8e-06 27.8 1.4 2 23 1052 1073 1051 1073 0.98

17 22 0.00019 0.021 15.6 3.8 1 23 1079 1101 1079 1101 0.99

18 22 2.2e-05 0.0025 18.6 2.2 1 23 1107 1129 1107 1129 0.98

19 22 1.4e-05 0.0016 19.2 2.8 1 23 1135 1157 1135 1157 0.98

20 22 7.1e-07 8.1e-05 23.2 1.6 2 23 1387 1408 1386 1408 0.97

21 22 9.4e-05 0.011 16.6 5.4 1 23 1414 1436 1414 1436 0.98

22 22 0.00085 0.096 13.6 4.6 1 23 1442 1465 1442 1465 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	2.8e-06	0.00031	21.4	1.4	1	23	54	76	54	76	0.99
2	22	6.9e-06	0.00078	20.2	0.6	1	20	82	101	82	104	0.96
3	22	2.8e-05	0.0032	18.2	1.2	1	23	110	133	110	133	0.96
4	22	0.0022	0.25	12.2	0.6	1	23	142	165	142	165	0.97
5	22	2.2e-07	2.4e-05	24.9	0.5	1	23	286	308	286	308	0.99
6	22	0.00049	0.055	14.3	0.8	1	23	314	336	314	336	0.99
7	22	0.0067	0.76	10.7	4.3	1	23	342	364	342	364	0.97
8	22	6e-05	0.0068	17.2	1.7	1	23	368	390	368	390	0.98
9	22	0.0044	0.49	11.3	6.8	1	23	445	467	445	467	0.98
10	22	1.7e-05	0.0019	18.9	4.8	1	23	473	495	473	495	0.99
11	22	8.3e-06	0.00093	19.9	2.1	1	23	501	523	501	523	0.98
12	22	0.00032	0.036	14.9	7.6	1	23	529	551	529	551	0.98
13	22	0.81	91	4.2	1.7	2	23	904	925	903	925	0.88
14	22	1.5e-05	0.0017	19.1	2.7	1	23	931	953	931	953	0.98
15	22	0.002	0.23	12.4	0.5	2	23	960	981	959	981	0.97
16	22	2.5e-08	2.8e-06	27.8	1.4	2	23	1052	1073	1051	1073	0.98
17	22	0.00019	0.021	15.6	3.8	1	23	1079	1101	1079	1101	0.99
18	22	2.2e-05	0.0025	18.6	2.2	1	23	1107	1129	1107	1129	0.98
19	22	1.4e-05	0.0016	19.2	2.8	1	23	1135	1157	1135	1157	0.98
20	22	7.1e-07	8.1e-05	23.2	1.6	2	23	1387	1408	1386	1408	0.97
21	22	9.4e-05	0.011	16.6	5.4	1	23	1414	1436	1414	1436	0.98
22	22	0.00085	0.096	13.6	4.6	1	23	1442	1465	1442	1465	0.97

Sequence Information

Coding Sequence: ATGTCGTTCGCCGTGGACTGTCTGAACTTTGCGTTTCTTCTCATCTGCACGCGCATATTCCACCTCGCTCTCGGAATCAGCGCTCAGTATTACAAGCATTACAGGCTACAAACAAAGATAGCGAAGCAAACGAAGAAAGGGATGAAACACAAAACAGTGTACAAGTGCACGATATGCTTGAAATTCTTTCAAAAACCGAGTCAGCTGATGCGTCACATCAGGGTGCATACCGGAGAAAAACCCTTTAAGTGTGTGATCTGCAACAGGGCGTTCACGCAAAAGAGTTCGCTGCAAATCCATATGTGGCAGCACAACGGCATTCGACCGCACAGTTGCAATCTCTGCACCGCAAAATTTAGTCAAAAAGGAAATCTAAAGGCACATATACTTAGGGTGCACAGCGCTCCGGAGGGTGAGCCTTCGTACGCTTGTCCTTATTGCGCTTGCATTTTCAAGAAGCTGGGCAGTTTAAACGGACACATAAAACGAGTGCATTCTAACGTCTCGGAAGAATCCGCGGCTAAGACATCCACGGAAACTAACATCACGTCGGACGCTGACATGCGTGCAACGGTCGACAGCGTGATATCGCAACTTGCATCGTTGGAATCCACCGTAAATAATACCGTGGATTCTACCAAGACCGCTGCTGCGTTAAACGCGGAACAAAACGACATTCTGCACCAAGCGTTGAAAAACAGCGATTTGTCAAGTGAAACCAAGATTACGTCCAAAGAAACTGCGGAATCAAAAAAGACGGAGTCAACGACATACGTCACGATATTGGATAAAACTGCAAACGGTACTTCAAGGAACTTTACCATAAAGCAACATTACATAGGAAACGTACGTTGGTACACGTGTTTGTACTGCCCGAAGGAGTTTAAAAAACCGTCGGATTTAATACGTCATCTGCGTGTCCACACACAGGAGAAACCCTTCAAGTGTATGTACTGCGTGCGATCCTTCGCGCTGAAATCGACGATGATAGCGCACGAGCGAACTCACAGCGGATTGAAGAAGTACGCTTGCAATTCCTGCAACAAAAGCTTCGCATGCCATAATACTCTAACCGCTCATATGAGATTACACACGAAACCACATAAATGTAACATATGCGACATGTCGTTTAGTTCGAGCATCGTTCTCAAGAATCATGTTAAGAGTCACGCGCGAGAGAAACCGAAGATAACGCCTGAGACGGAGAGTTTGATACCGCAGGTGGTGTTGCAGGAGCCGCTCGTAATCAGTGACGCTGATAATAAAATCAGCGTGGCGCAAGTGCAGTCGAAACAGAAACAAATGTACGAGAGCGTCGGCGTAGCCAGGCCGCACGAATGTTCCGTCTGCCACGCGGCATTTCGCAAAGTCAGTCACCTGAAGCAACATTTCCGCAGGCATACGGGCGAACGGCCTTACAAGTGCAACAAATGTGACAGGAGATTTTCGTCCAACAGTGTTCTCAAATCTCATCTGCACACTCACGAAGCTGCGAGACCGTACAGTTGTTCGGTGTGCAACACAAAATTCTCCACGCAGAGCAGCATGAAGAGGCATTTGGTCACGCACAGTAATAAAAGGCCGTTCATGTGTCCATATTGTCACAAAACGTTCAAGACGTATGTTAACTGTCGGAAGCATATGAAAATACACAAACACGAGTTGGCACAGCAGCAATTGGAGGTGCAAAAGACGCAGGAGAAGCAATCTCCAGTCGAGGACAAAGCTACTTCTTCAACATTACCAGAAACTATTAGCCTTCCCGAAAATATGGAAGTGTCGTTCCAACAACAAATAGCCTCGGACTTCACGCATGCTTTTTCCGACCAGTTTCAGAACATCAGCACGGATAAGGAGAAAACCTTCTTGTTAACGGATACTATAACATCGACTCAAAATTTATCCGTTGAGGCAACTAATTTGGGCTCAGCGCAAACTTTACACGCCGACGAAACCGGCACTATTACGTTGCCTCAGTATCCGGGAGATCAAACTTTAACGCCGGAAAACATACGAGAGATTGAAGAGACTCTGAATCAACAGTTGTTTAGTATTGGCATGAATCTCGGGGTGGGAACGAACAATCTGTCGAGACAGATGGACGAGGCGAATATAAGCACTCTCGACGGCGTCAAAGAACAGCCGGTATTGAACATAATATACGATCACAACAAGACTCTGGACGCATCAGGCAACGCCATTTTCACGCCGCAATTCGACACGTTCGACATAGGTCAAATTACGTTGCAGACGAATAACGAGATGGATATCGGCTTGAATCCGAGCAACTCCGCGCCAATCATGTCCGGCGTCCCGTCCAAATCTGCAGATGGGAGCAACGGTCAGCAGGAAGAACGAGAAACCGCTTCGGTTACCACCGTCAGTAACATAGACGCTTCTCAAGTGATAAAGAATGCCCATCTCATGCTGATAAACCCCAAGGAAAATTGTTCGGAATTGATAAAACTGTCGCACGTGCCTCCGCAAAAGTATTCGAAACCTGCGAAAACGAACACCGCGAACGAAATAGAGATGCAAGTCATCAACGAAGAAGCGCCACAGAAGAGTAACGCTGTTTCGTGCGAGAACGAAAGAAGCCCTTCGTCTTTGTTCATAGATAACTTTCAAAGTACAATACAGTCGGACATGCTTATCTCCTCTGACCAAATGGATAATCTGACCAAAATGTCGGAATGCAACACTCTGTTGCAGTGTCACATGTGCAACGATCGGGGTTTCACCACGGAAGGATTAAAGGAACACTTGAAATCTCATCGCGGAGCAAAAGAATTCGAGTGCTCGGAATGTTCTCAGAGATTCTGCACGAACGGTGGCCTCAGCAGGCACATGAAGATGCACACAAATAAGCAACAGTGGAAATGCACGATCTGTCAGAAGGTTCTGGGCAGCAAGGTGCAATTGAAGCTTCACAGCAAGATGCATACCGAGGGCTGGAACGTCTCGTTTGTCGATGGTGATAATTCTCCGAAGGAATTCGCTTCGTCCGCTCTTCCGTCATTGACGCTAGACGTGCGAATAGATCCGGACTCGTCGGTGTCCGAGAAAGTTTTGATGGACGCCTTCGCCGAGAAGAAAAGTATAGACCAAGCGGATGAAAATGTTGAAAAGGGAGAAAAGAAGGAATATGTAAATAAATGTAAATACTGTCCGAAAACCTTCCGCAAACCGAGCGACCTTATCAGACACATTCGCACGCATACGGGCGAGCGACCGTACAAGTGTACACGCTGCAATAAGAGTTTTGCGGTCAAGTGCACTCTCGACTCGCACATGAAAGTTCACACGGGTAAGAAGACGTTCCGCTGCCACGTCTGCACCAGCATGTTTGCCACGAAGGGTAGTTTAAAGGTCCACATGCGTCTGCACACGGGCTCCAAACCGTTCAAATGTCCCATATGTGACATGCGATTCCGCACTTCCGGTCACAAGAAGGTGCACATGCTGAAGCACGCGAGAGAACACAAAGGTGGCACAAAGCGCAAGCCAAAACACGTCAAGTACGCGGCTGTGGCGGAAGCAGCGGCGAGTTGTGAGAAATTCGACAACAGTTCTCCAAATCGCACGACAACGGAGACGGCGACGGTGGCGGCAACGACGACTGTGATGAACGAAACCGCTCCAACGCAAAATTTGGACTACTCTTCGGTGGAGCATACTGTGAATCTCGATACCGCGGTTCACTTGCCCGACCAGATTACATTTAATCAGCCCGAGGCAACGGCACTTATCAACAACAATTCCGTGCTATCAGTGAACGAGAACAACGAGCTGGTGACGAATCTGCAATTTTTACTGGCAAACGGTTTCGTCACCATCCAGACGGACGACACTCTGCTGAGCGCGCAACCGGCAACGAGCAGCTCAGACACCAGCGGCACCGCGGTGCCAACCAATGTGATCGAATTTGTGAATCCGAATCCTTTCCAAGAAACTTGCAATCTGAGTGATACGAATCACGTGGTGATAACTAGTCAGATACCGGTGACGACAACTGCGAACGACGCGACGGTCATTCAAATGAACGATTGCATGTCTTCCATTCCAATAATGCCGATAGAACAGAATCAAGACCCGAATATCAGCGGCGCGTTGTCCGAAACGAAGACAAACAGTCAGTCGACGAAATCCTCCAGAAAGGAATGTGATACGTGCGGCAAAACGTTCACGAAGCCGTACCAGTTGGAACGCCACAAGCGTAGTCACACGGGCGAGCGGCCGTACAAATGCGACCAGTGCGGCAAGGCGTTTGCTCAGAAGTTCACACTGCATCTTCATCAAAAACATCACACCGGCGATCGACCGTACCCATGTCCGCACTGCAAGCAATGGTTCTCGCAAAAGTGCAATCTCCAGACGCACTTGAAGCGCGTCCACAAATTAGTTTTGCTCGACATCAAAAAGCTGAAGAACAATCAGCAGGTGTTGGGCACGCTTCTGCAGGACGGTCAAGGAGACAACGCCAAACTGGTGAACTTGGACGACATACTGGTAGTGGATTTTCTCAAATAA
Protein Sequence: MSFAVDCLNFAFLLICTRIFHLALGISAQYYKHYRLQTKIAKQTKKGMKHKTVYKCTICLKFFQKPSQLMRHIRVHTGEKPFKCVICNRAFTQKSSLQIHMWQHNGIRPHSCNLCTAKFSQKGNLKAHILRVHSAPEGEPSYACPYCACIFKKLGSLNGHIKRVHSNVSEESAAKTSTETNITSDADMRATVDSVISQLASLESTVNNTVDSTKTAAALNAEQNDILHQALKNSDLSSETKITSKETAESKKTESTTYVTILDKTANGTSRNFTIKQHYIGNVRWYTCLYCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHSGLKKYACNSCNKSFACHNTLTAHMRLHTKPHKCNICDMSFSSSIVLKNHVKSHAREKPKITPETESLIPQVVLQEPLVISDADNKISVAQVQSKQKQMYESVGVARPHECSVCHAAFRKVSHLKQHFRRHTGERPYKCNKCDRRFSSNSVLKSHLHTHEAARPYSCSVCNTKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQQQLEVQKTQEKQSPVEDKATSSTLPETISLPENMEVSFQQQIASDFTHAFSDQFQNISTDKEKTFLLTDTITSTQNLSVEATNLGSAQTLHADETGTITLPQYPGDQTLTPENIREIEETLNQQLFSIGMNLGVGTNNLSRQMDEANISTLDGVKEQPVLNIIYDHNKTLDASGNAIFTPQFDTFDIGQITLQTNNEMDIGLNPSNSAPIMSGVPSKSADGSNGQQEERETASVTTVSNIDASQVIKNAHLMLINPKENCSELIKLSHVPPQKYSKPAKTNTANEIEMQVINEEAPQKSNAVSCENERSPSSLFIDNFQSTIQSDMLISSDQMDNLTKMSECNTLLQCHMCNDRGFTTEGLKEHLKSHRGAKEFECSECSQRFCTNGGLSRHMKMHTNKQQWKCTICQKVLGSKVQLKLHSKMHTEGWNVSFVDGDNSPKEFASSALPSLTLDVRIDPDSSVSEKVLMDAFAEKKSIDQADENVEKGEKKEYVNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCTRCNKSFAVKCTLDSHMKVHTGKKTFRCHVCTSMFATKGSLKVHMRLHTGSKPFKCPICDMRFRTSGHKKVHMLKHAREHKGGTKRKPKHVKYAAVAEAAASCEKFDNSSPNRTTTETATVAATTTVMNETAPTQNLDYSSVEHTVNLDTAVHLPDQITFNQPEATALINNNSVLSVNENNELVTNLQFLLANGFVTIQTDDTLLSAQPATSSSDTSGTAVPTNVIEFVNPNPFQETCNLSDTNHVVITSQIPVTTTANDATVIQMNDCMSSIPIMPIEQNQDPNISGALSETKTNSQSTKSSRKECDTCGKTFTKPYQLERHKRSHTGERPYKCDQCGKAFAQKFTLHLHQKHHTGDRPYPCPHCKQWFSQKCNLQTHLKRVHKLVLLDIKKLKNNQQVLGTLLQDGQGDNAKLVNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01268436;
90% Identity: iTF_01268436;
80% Identity: -