Pden006187.1
Basic Information
- Insect
- Pseudomyrmex dendroicus
- Gene Symbol
- Xbp1_1
- Assembly
- GCA_014825645.1
- Location
- QVNZ01012993.1:28964-31723[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-11 2e-08 34.6 11.0 2 46 82 126 82 126 0.96 2 2 2e-07 0.00021 21.7 6.6 24 64 118 158 115 159 0.93
Sequence Information
- Coding Sequence
- ATGTCCTCCATGAAGAGCGTCATAATCACCCTGCCTAAGGAATTGTCAAAGACATTTCCAAACGAGTTGTCATACAACGCGTGGGCACCCAAATTGAACTTCACTACGTCTATTTTATCTGACAAAACGACAAGGATGGACTCCGCCATCAGAAAAGTGACCGCCAAAGAAGAGGCGCACGATACCAAACCCGCGGAGACCAGTGTACGCGGCAAGAAACGTCGACTGGATCATTTGACGTGGGAGGAAAAATTGCAAAGAAAAAAGTTGAAGAACCGAGTGGCGGCACAGACTTCAAGGGATCGCAAAAAGGCCAAGTTAGACGAGTTGGAAGAAACAGTAAGAACGTTAAGAGAAAGAACAGAACAACTCACACAACAATGCACGATGCTAAGCTCGCAGAACGAGAAGTTATTGGCTGAAAACAAAAGACTCAGAAGCGAAATAGACGTGGTCAAAGATCAGCAACAGCAATATTGCTCCCTATGGTGGAACAGCACAGCCGGCATCGTGTCTGACGCCAGGAGCAGCCATCCTGTTGAAGATTATGACTTTCTGTCTACTTTGGAAGAGCTATTCAGAGATCTCCCAGGAGACGACTGTGAAAAACTCCAAGAATTGGCCGAAAGTTTTATGCAAGAAGTTCCCGCCGAAGTGGAAGCAAATACTCAGAGATCAAATGAACAAGCATCCCTCGAGGACGATTCCGTTAAACAATCTGAATATTCAGACGCAATGGTGGGGCAGGCATCAGAAAATGTGGAAGCCGGTCGAACCAGTGGAGGCGTAAATGACATCTTGTATTTAGGTGATATATCCGATCCACATTCCGTTATCTGTAACACAGCGAGCACGGCATCGTTGAAATCGATCAAAGCCGAAATCAAGCAAGAATCCGAGATAGCACCGGAGACCGTTTACGGCACATATGACGAAGCAACCAATTCCATCACTATCTTCTACGGCGAAGAGAACGGCGATTGTGTGAATATCCAGGAATGCGTGCAGGAAGTGGTGAGCACCGGAGAACAGCAGTTGGAGAGCGGCAACGTCTGTCCTGTCGTTGAAGACGCCACGCATCTCACCGTTTCCTCGGTCAATCACACCAGCTATCCGATGCAATTCTCACCGACGTACAAAGATGCTATGTCACCCGCGACGAGCGACGTCTACTCGGACGCGGACAGTTCCGGTGTTTTCACCGCGGCTTTCTACGGGACAAAGCTGGATTGCGCAAGTCCGGACGGTGGTTACGAGTCGCACGACTCGCCGGACTCGCGTCAATCGAATCTTCTAACCGATCTCGGCTCTCGGATGGAGACCTTCACCGAGCTGTTCCCTGACCTGCTGACCTGA
- Protein Sequence
- MSSMKSVIITLPKELSKTFPNELSYNAWAPKLNFTTSILSDKTTRMDSAIRKVTAKEEAHDTKPAETSVRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEETVRTLRERTEQLTQQCTMLSSQNEKLLAENKRLRSEIDVVKDQQQQYCSLWWNSTAGIVSDARSSHPVEDYDFLSTLEELFRDLPGDDCEKLQELAESFMQEVPAEVEANTQRSNEQASLEDDSVKQSEYSDAMVGQASENVEAGRTSGGVNDILYLGDISDPHSVICNTASTASLKSIKAEIKQESEIAPETVYGTYDEATNSITIFYGEENGDCVNIQECVQEVVSTGEQQLESGNVCPVVEDATHLTVSSVNHTSYPMQFSPTYKDAMSPATSDVYSDADSSGVFTAAFYGTKLDCASPDGGYESHDSPDSRQSNLLTDLGSRMETFTELFPDLLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01269552; iTF_01270951; iTF_01266653; iTF_01267295; iTF_01268755; iTF_01270265;
- 90% Identity
- iTF_01269552; iTF_01270951; iTF_01267295; iTF_01268755; iTF_01266653;
- 80% Identity
- -