Pcub002667.1
Basic Information
- Insect
- Pseudomyrmex cubaensis
- Gene Symbol
- XBP1
- Assembly
- GCA_014825685.1
- Location
- QVOA01010627.1:36748-39598[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-11 1.8e-08 34.6 11.0 2 46 82 126 82 126 0.96 2 2 3.4e-07 0.00033 21.0 7.3 24 64 118 158 115 159 0.93
Sequence Information
- Coding Sequence
- ATGTCCTCCATGAAGAGCGTTATAATCACCCTGCCTAAGGAATTGTCAAAGACATTTCCAAACGAGTTGTCATACAACGCGTGGGCACCCAAATTGAACTTCGCTGCATCTATTTTGTCTGACAAAACGACAAGGATGGACTCCGCCATCAGAAAGGTGACTGCCAAAGAAGAGGCGCACGACACCAAACCCGTGGAGACCAGTGTACGCGGCAAGAAACGTCGACTGGATCATTTGACGTGGGAAGAAAAATTGCAAAGAAAAAAGTTGAAGAACCGGGTGGCGGCACAGACTTCAAGGGATCGCAAAAAGGCTAAGTTAGACGAGTTGGAAGAAACAGTAAGAACGTTAAGAGAAAGAACAGAACAACTCACACAACAGTGCACGATGCTAAGCTCGCAGAACGAGAAGTTATTGGCTGAAAACAAAAGACTCAGAAGCGAAATGGACGTGGTCAAAGATCAGCAACAGCAGTACTGCTCCCTATGGTGGAACAGCACAGCCGGCATCGTGTCTGACACTGACGCCAGGAGCAGCCATCCTGTTGAAGATTATGACTTTCTGTCTACTTTGGAAGAGCTATTCAGAGATCTCCCAGGAGACGACTGTGAAAAACTCCAAGAACTGGCCGAAAGTTTTATGCAAGAAGTTCCCGCCGAAGTGGAAGCAAATACTCAGAGATCAAATGAACAAGCATCCCTTGAGGACGATTCCGTTAAACAGTCTGAATATTCAGACGCAATGGTGGGGCAGGCATCAGAAAATGTGGAAGCCGGTCGAACCAATGGAGGCGTAAATGACATCTCGTATTTAGGTGATATATCCGATCCACATTCCGTTATCTGTAACACAGCGAGCACGACATCGTTGAAATCGATCAAAGCCGAAATCAAGCAGGAATCCGAAATAGCCCCGGAGACCGTCTACGGCACATATGACGAAGCAACAAATTCCATCACTATCTTCTACGGCGAAGAGAACGGCGATTGTGTGAATATCCAGGAATGCGTGCAGGAAGTGGTGAGCACTGGAGAACAGCAGTTGGAGAGCGGCAACGTCTGTCCTGTCGTTGAAGACGCCGGAGTTGCCACGCATCTCACCGTTCCCTCAACCAATCACACCAGCTATCCGATGCAATTCTCACCGACGTACAAAGATGCTATGTCACCTGCGACGAGCGACGTCTACTCGGACGCGGACAGTTCCGGTGTTTTCACCGCGGCTTTCCACGGGACAAAGCTGGATTGCGCAAGTCCGGACGGTGGTTACGAGTCGCACGACTCGCCGGACTCGCGTCAATCGAATCTTCTAACCGATCTCGGCATGGAGAGCTTCACCGAGCTGTTCCCTGAACTGCTGACCTGA
- Protein Sequence
- MSSMKSVIITLPKELSKTFPNELSYNAWAPKLNFAASILSDKTTRMDSAIRKVTAKEEAHDTKPVETSVRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEETVRTLRERTEQLTQQCTMLSSQNEKLLAENKRLRSEMDVVKDQQQQYCSLWWNSTAGIVSDTDARSSHPVEDYDFLSTLEELFRDLPGDDCEKLQELAESFMQEVPAEVEANTQRSNEQASLEDDSVKQSEYSDAMVGQASENVEAGRTNGGVNDISYLGDISDPHSVICNTASTTSLKSIKAEIKQESEIAPETVYGTYDEATNSITIFYGEENGDCVNIQECVQEVVSTGEQQLESGNVCPVVEDAGVATHLTVPSTNHTSYPMQFSPTYKDAMSPATSDVYSDADSSGVFTAAFHGTKLDCASPDGGYESHDSPDSRQSNLLTDLGMESFTELFPELLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01268018;
- 90% Identity
- iTF_01268018;
- 80% Identity
- -