Pcoc015814.1
Basic Information
- Insect
- Pseudomyrmex concolor
- Gene Symbol
- XBP1
- Assembly
- GCA_014839585.1
- Location
- QVOB01025295.1:9462-12220[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6e-11 1.8e-08 34.6 11.0 2 46 82 126 82 126 0.96 2 3 2.2e-07 0.00025 21.4 6.4 24 63 118 157 115 159 0.92 3 3 4.1 4.6e+03 -1.9 0.6 34 48 203 217 201 232 0.75
Sequence Information
- Coding Sequence
- ATGTCCTCCATGAAGAGCGTCATCATCACCCTGCCTAAGGACTTGTCAAAGACATTTCCAAACGAGTTGTCATACAACGCGTGGGCACCCAAGTTGAACTTTACTACATCTATTTTGTCCGACAAAACGACAAGGATGGACTCCGCCATCAGAAAGGTGACCGCCAAAGAAGAGGCACACGACATCAAACCCGCGGAGACCAGTGTACGCGGCAAGAAACGTCGACTGGATCATTTGACGTGGGAGGAAAAGTTGCAAAGAAAAAAGCTGAAAAACCGGGTGGCAGCACAGACTTCAAGAGATCGCAAAAAGGCTAAGTTAGACGAGTTGGAAGAAACAGTAAGAACGTTAAGAGAAAGAACAGAACAACTCACACAACAGTGCACAATGCTAAGCTCGCAGAACGAGAAGTTATTGGCTGAAAACAAAAGACTCAGAAGCGAGATAGACGTGGTCAGAGATCAGCAACAGCAGTACTGCTCCCTATGGTGGAACAGCACAGCCGGCATCGTGTCTGACACTGACGCCAGGAGCAACCGTCCTGTTGAAGATAATGACTTTCTGTCTACTTTGGAAGAGCTATTCAGAGATCTCCCAGGAGACGACTGTGAAAAACTCCAAGAACTGGCCGAAAGCCTTATGCAAGAAGTTCCCGCCGAGGTGGAAGCAAATACTCAGAGATCAAATGAACAAGCATCCCTTGAGGACGATTCCGTTAAACAATCTGAATATTCAGACGCAATGGTGGGGCAGGCATCAGAAAATGTGGAAGCCGGTCGAACCAGTGGAGGCGTAAATGACATCTCGTATTTAGGTAATATATCCGATCCACATTCCGTTGTCTGTAACACAGCGAGCACGGCATCGTCGAAATCGATCAAGACCGAGATCAAGCAGGAATCCGAGATAGCACCGGAGACCGTCTACGGCACATATGACGAAGCAACCAACTCCATCACTATCTTCTACGAAGAGAACGGCGATTGCGTGAATATCCAGGAATGCGTGCAGGAAGTGGTGAGCACCGGAGAACAGCAGTTGGAGAGCGGCAACGTCTGTCCTGTCGTTGAAGACGCCGGAGTTGCCACGCATCTCACCGTTCCCACGGCCAATCACACCAGCTATCCGACGCAATTCTCACCCACGTACAAAGATGCTATGTCACCCGCGACGAGCGACGTCTATTCGGACGCGGACAGTTCCGGTGTTTTCACCGCGGATTTCCACGCGACAAAGCTGGATTGCGCAAGTCCGGACGGTGGTTACGAGTCGCACGACTCGCCAAATCCGCGTCAATTGAATCTTCTGACCGATCTCGGCATGGAGAGCTTCACCGAACTGTTCCCTGAACTGCTGACTTGA
- Protein Sequence
- MSSMKSVIITLPKDLSKTFPNELSYNAWAPKLNFTTSILSDKTTRMDSAIRKVTAKEEAHDIKPAETSVRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEETVRTLRERTEQLTQQCTMLSSQNEKLLAENKRLRSEIDVVRDQQQQYCSLWWNSTAGIVSDTDARSNRPVEDNDFLSTLEELFRDLPGDDCEKLQELAESLMQEVPAEVEANTQRSNEQASLEDDSVKQSEYSDAMVGQASENVEAGRTSGGVNDISYLGNISDPHSVVCNTASTASSKSIKTEIKQESEIAPETVYGTYDEATNSITIFYEENGDCVNIQECVQEVVSTGEQQLESGNVCPVVEDAGVATHLTVPTANHTSYPTQFSPTYKDAMSPATSDVYSDADSSGVFTADFHATKLDCASPDGGYESHDSPNPRQLNLLTDLGMESFTELFPELLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01268018;
- 90% Identity
- iTF_01268018;
- 80% Identity
- -