Pgra005810.1
Basic Information
- Insect
- Pseudomyrmex gracilis
- Gene Symbol
- XBP1
- Assembly
- GCA_002006095.1
- Location
- NW:34885-39389[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.7e-11 8.9e-09 34.5 11.0 2 46 85 129 85 129 0.96 2 3 4.8e-07 0.00026 20.2 5.5 24 63 121 160 118 162 0.92 3 3 3.9 2.1e+03 -1.9 0.4 34 48 228 242 226 252 0.74
Sequence Information
- Coding Sequence
- ATGTCCTCCATGAAGAGCGTAATCATCACCCTGCCTAAGGAATTGTCGAAGACATTTCCGAACGAGTTGTCGTTTAATAACGCGTGGGCACCCAAATTGAACTTCGCCACATCGATCTTGTCCGATAAAACGACAAGGATGGATTCTGCCATCAGAAAGGTGGTCACCACCAAGGAAGAGGAGGCGCGCGACGTCAAACCCGCGGAAACCAGCGTACGCGGCAAGAAACGTCGACTGGATCATTTGACGTGGGAGGAAAAGCTGCAGAGAAAAAAGCTGAAGAACCGGGTAGCGGCACAGACTTCAAGGGATCGCAAAAAGGCCAAGTTAGACGAGTTAGAAGAAACAGTACGAAcgttgagagaaagaacggaACAACTCACACAGCAGTGCACGATGTTAAGCTCGCAGAATGAGAAATTAATGACCGAAAACAAAAGGCTCAGAAGCGAGATAGACGTTGTCAGAGATCAGCAACAGCAGTACTGCTCCCTATGTCAGTCTCGTGTCGGCTGCGCTGTACCTTCAACCGGATCTGCAGTATCCATCAACCCTCTGCCGCAGGGTGGAACAGCACAGCCGGCATCGTGTGACAATGACGCCAGGAGCAGCCGTCCTGTTGAAGATTATGACTTTCTGTCTACTTTGGAAGAGCTATTCAGAGATCTCCCGGGAGACGACTGTGAAAAACTCCAAGAACTGGCCGAAAGCCTTATGCAAGAAGTTCCCGCCGAAGTGGAAGCAAATACTCAGAGATCAAATGAACAAACAACCCTTGAGGACGATTCCGTTAAGCAATCTGAATATTCAGATGCAATGGTGGGGCAGGCATCAGAAAATGTGGAAGCCGGTCGAACCAGTGAAGGCGTAAATGACATCACTTATCTGGGTGATATAGACCCACATTCTGTTGTTTGCAACACAACGAGCACGGGATCGTTGAAATCGGTCAAAGCCGAGATCAAGCAGGAATCCGAGATAGCGCCGGAAACCGTCTACGGCACGTACGACGAAGCAACCAATTCCATCACTATCTTCTACGGCGAAGAGAACGGCGGTTGCGTGAGCATCCAGGAGTGCGTGCAGGAAGTTGTGAGCACCGGAGAACAGCAGTTGGAGAGCAGCGGCAACGTCTGTCCTGTCGTTGAAGACGCCGGAGTTGCCACGCATCTCACCGTTCCCACGGTGGCCAATCACACGGCCGGCTATCCAACGCAATTCTCACCCACGTACAGAGATGCCATGTCACCCGCGACGAGCGACGTCTACTCGGACGCGGACAGTTCAGGTGTTTTCACCGCGGGTTTTCACGCGACAAAACTGGATTGCTCAAGTCCGGACGGTGGTTACGAGTCGCACGACTCGCCGGACTCGCGTCAATCGAATCTTCTGACCGATCTCGGTATGGAGAACTTCACCGAGCTGTTTCCCGAACTGCTGACCTGA
- Protein Sequence
- MSSMKSVIITLPKELSKTFPNELSFNNAWAPKLNFATSILSDKTTRMDSAIRKVVTTKEEEARDVKPAETSVRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEETVRTLRERTEQLTQQCTMLSSQNEKLMTENKRLRSEIDVVRDQQQQYCSLCQSRVGCAVPSTGSAVSINPLPQGGTAQPASCDNDARSSRPVEDYDFLSTLEELFRDLPGDDCEKLQELAESLMQEVPAEVEANTQRSNEQTTLEDDSVKQSEYSDAMVGQASENVEAGRTSEGVNDITYLGDIDPHSVVCNTTSTGSLKSVKAEIKQESEIAPETVYGTYDEATNSITIFYGEENGGCVSIQECVQEVVSTGEQQLESSGNVCPVVEDAGVATHLTVPTVANHTAGYPTQFSPTYRDAMSPATSDVYSDADSSGVFTAGFHATKLDCSSPDGGYESHDSPDSRQSNLLTDLGMENFTELFPELLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01268018;
- 90% Identity
- -
- 80% Identity
- -