Plon015820.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pseudococcus longispinus
Gene Symbol
TFIP11
Assembly
GCA_900064475.1
Location
FIZU01036106.1:1-3481[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3e-81 3.5e-77 260.1 16.3 1 275 396 661 396 661 0.98
2 2 0.2 2.4e+03 -1.8 0.2 105 125 670 690 662 693 0.68

Sequence Information

Coding Sequence
ATGGCAGATGaagaatttatcaagtttgaaATCACCGATGAAGATCTAAATAATGAATTCACTCAACACAGAACCCACAGACTATCGAAACATCAGcagatttatgGAATATGGGCTGATAAAGAGTATTCGGATGGCAGCGACGAAGAACCTCGAGAACGTAAACATttcaaaggcaaaaaaaattaccaagccCCCGTTAATTTCATCGCCGGTGGTATTCATCAACCTGGTGCTAAACCAGCTGACACCGTTGATGATGGAGGTAATAAAGAAGACGATGATGAACCCGAAGTCATCTCTGATTCCAGCGAGGAAGAACTAGTCCGTCCATcttttggtagaaaaaatcgtacaaatttTCCCGATTTCAATGAATTCAATCCGAGTGAAATGGCTGGGCTACGAAAAGCAGTCCCTAAAGAACGAAACGTAACATTGGTTGATAAAGGAGTCGGTAATTGGGAAAAACATACCAAAGGAATTGGTGCAAAATTGCTATTACAGatGGGTTACCAACCTGGCAAAGGTTTAGGTAAAGATTTGCAAGGTATTCAGGCACCTATTGAAGCACATTTAAGAAAAGGCAGAGGAGCAATCGgtgCTTATGGAcctgagaaaaaaaccaaagtaGCGAAAATCGATAAATCCAAAGGTGAAGAAATCGATAccgaaaaagtagaaaaatccGAAAGAACATCGCTATGGAGAAAAGAAGGTATggaatcgaagaaaaaaatacgttacgTTTATAAAAGCGTAGACGAGGTCATCGAAGAGAGTAAAAAACcaggaaagaaaaaagtagaaattagcGAATTGAGTAAAGTCAAAGTAATCGATATGACTGGACCTGAGCAACGAGTTCTTTCCGGATATCATGCGATTTCAGGAGTACAAAAACCCGCCGAAGAATGGGAATTGAGGAAagataaaaagtttttcaatttttctatgcCCGAATTACaacataatttaaatttactgGTCGACGTTTCGGAacagGCGATTATTgacaacgataaaaaaatgaaacaagcCGAAGAACGTTTGAAAGTTTTAGacattcaagaaaaaaatctaagtcAAATGTTAAAACGTGATAAACTTTTgatagataattttcaaaagatgcTCGATATGGTTAATTCTGTGGTGAAATCGTCCAAAGATAAAACCCTAACGTTGGATAGAGCcgaagcaattttttcttcgatgaaAGATAaccatttcaacgaattttgtaaatttgaaatccCAGTACTAGCTGTAAACATCGTAAGATCATTGTTAAAAGAccatttagaaaattggaaaCCTTTGGAAGAACCAAATAAACCGAtacctgaatttttaaaatggaggACGATCTTGCAACTAGAAGACTCCGGTCAAACGTTATTAAACCCTTATTATAAATTAATGTGGGATGTTTGGGTACCTTGTGTTCGTTCTGCTGCTGAAACGTGGCAGTGTCGTCAGTGGTCACCGATGATAGATTTTATTATGAATTGGATTCCTTTTATATCGAAaggaattttagaaaatgttttacAAGATATTATACTCAGACGAATTCAACAAGATGTAGACGAATGGAATCCATTAACCGATTGTGTTCCTATTCATTCGTGGATCTATCCTTGGATTAATTTTCTAGgtaaaaatttcgaaaccagTGTATATCCAACCATTCGACACAAACTTTCTAAAGCTTTGATAAGCTGGCACCCTTCAGATGGATCGGCGAGATTAATGTTGCAGCCATGGATGAGTGTATTCGAACCAGGAGAAATGAATGCCTTTTTGGTAAATAATATTGTACCAAAGCTGCGAAGTGTTTTACTCGATTTTGTGATTAATCCTCACCAGCAATGTttagATAATTGGAAATGGGTAATGGAATGGTCTGAAATGATTCCTGCTCATACGATGGCTCAACTCCTGGATCAAGGCTTCTTCCCTAAATGGTTACAAACTCTCAATGCTTGGCTTCACATGAATCCCGATAATGACCAAGTTAACCAATGGCTGAACGGATGGAAGGGTCTAATACCTGATAATGTTAAAACACAACCAATTGTTAATG
Protein Sequence
MADEEFIKFEITDEDLNNEFTQHRTHRLSKHQQIYGIWADKEYSDGSDEEPRERKHFKGKKNYQAPVNFIAGGIHQPGAKPADTVDDGGNKEDDDEPEVISDSSEEELVRPSFGRKNRTNFPDFNEFNPSEMAGLRKAVPKERNVTLVDKGVGNWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGIQAPIEAHLRKGRGAIGAYGPEKKTKVAKIDKSKGEEIDTEKVEKSERTSLWRKEGMESKKKIRYVYKSVDEVIEESKKPGKKKVEISELSKVKVIDMTGPEQRVLSGYHAISGVQKPAEEWELRKDKKFFNFSMPELQHNLNLLVDVSEQAIIDNDKKMKQAEERLKVLDIQEKNLSQMLKRDKLLIDNFQKMLDMVNSVVKSSKDKTLTLDRAEAIFSSMKDNHFNEFCKFEIPVLAVNIVRSLLKDHLENWKPLEEPNKPIPEFLKWRTILQLEDSGQTLLNPYYKLMWDVWVPCVRSAAETWQCRQWSPMIDFIMNWIPFISKGILENVLQDIILRRIQQDVDEWNPLTDCVPIHSWIYPWINFLGKNFETSVYPTIRHKLSKALISWHPSDGSARLMLQPWMSVFEPGEMNAFLVNNIVPKLRSVLLDFVINPHQQCLDNWKWVMEWSEMIPAHTMAQLLDQGFFPKWLQTLNAWLHMNPDNDQVNQWLNGWKGLIPDNVKTQPIVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01472462;
90% Identity
iTF_00725515; iTF_01263367;
80% Identity
-