Fvir001308.1
Basic Information
- Insect
- Ferrisia virgata
- Gene Symbol
- TFIP11_1
- Assembly
- GCA_900060175.1
- Location
- FIZR01015100.1:49843-53280[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-80 4e-76 256.4 17.1 1 275 396 661 396 661 0.98 2 2 0.32 3.2e+03 -2.4 0.1 105 126 670 691 663 702 0.67
Sequence Information
- Coding Sequence
- atggcaGATGAAGAATTTATCAAGTTTGAAATTACCGACGAAGATCTTAACAATGAATTTTCTCAACACAGAACTCATAGATTATCTAAACATCAACAAATATACGGAATATGGGCTGATCCGGGCGGCTCAGATGGCAGCGATGAAGAACGTCGAGATCGTAAACATTtcaaaggcaaaaaaaattaccaagctCCGGTGAATTTTATCGCTGGTGGAATTCATCAGCCAGGCGCTAAGCCTGCTGAAATCCACGATGATGGACGTAATAAAGAAGACGATGATGAACCTGAAGTAGTTTCTGATTCTAGCGAGGAAGAATTGGTCCGTCCATCTtttggtagaaaaaataaaacaaattttcccgATTTTAATGAGTTTAATCCTAGTGAAATGGCTGGTTTTCGAAAAGCAGGACCTAAGGAGCAAAACATTACACTGGTTGATAAAGGTGTCGGCAATTGGGAAAAGCATACTAGAGGAATCGGCGCGAAGTTATTATTAcagaTGGGATATCAACCAGGAAAAGGTTTGGGTAAAGATTTACAAGGTATTCAGGCTCCAATCGAAGCACATTTGAGAAAAGGCAGAGGAGCAATAGGTGCCTACGGTCCTGAGAAAAAAAccaaagtatcaaaaattgataaatcaaAGGGAGATGAAATCGAAATCGACAAAGTAGAAAAATCCGAAAGAACATCACTATGGAGAAAAGAAGGTGtggaagcgaaaaaaaaaatacgctatGTTTACAAAAGTATCGACGAGGTGAttgaagaaagtaaaaaacctggaaagaagaaaatggaaattaGCGAATTGAGTAAAGTTAAAGTAATTGATATGACCGGACCGGAACAAAGAGTTCTTTCTGGCTATCATGCTATATCTGGTGTTCAGAAACCTGCTGAAGAATGGGAATTacgaaaagataaaaaattctccaactTTTCGATGCCCGAATTACaacataatttaaatttattagtaGACGTTTCGGAAcaggCCATTATtgataacgataaaaaaatgaaacaagcCGAAGAGCGGATCaaagttttagaaaatcaagcaaaaaatCTCAGCCAAACGTTAAATCGAGATAAAATGTTgatcgataattttcataaaatgctCGATATGGTTAATTCTGTTGTAAAATCTTCAAAAGATAAAACGCTCACGTTGGATAGAGCcgaagaaattttctcatctatGAAAgaaaatcattttactgaattttgcaTCTATGAAGTACCCGTACTTGCTGTAAATATTGTTAGACCATTGCTTAAAgatcatcttgaaaattggaaacccTTGGAAGAACCTACCAGACCAATACCagagtttttaaaatggagAACTATTTTACAATTAGAAGATTCCGGTCAAACGTTATTAAATCCTTATTATAAGCTTATGTGGGATGTTTGGGTACCTTGTGTTCGTTCTACTGCCGAATCGTGGCAATGTCGTCAGTGGTCACCGATGGTAGATTTTATCATGAACTGGATTCCTTTTATATCGAAaggaattttagaaaataatttacaagaTATACTACTGCGAAGAATTCAACAAGACGTAGACGAATGGAATCCACTGACAGATTGTGTTCCTATACATTCGTGGATATACCcttggatcaattttctaggtaaaaattttgaaaccagcGTATATCCTACCATAAGGCATAAACTTTCCAAAGCATTGATCAGTTGGCATCCTTCCGATGGATCGGCGAGATTAATGTTGCAACCATGGATGAGTGTGTTCGAGCCCGGAGAAATGAACgcatttttggtaaataataTAGTACCAAAGTTACGAAGCACTTTGCTCGATTTCGTTGTTAATCCTCATCAGCAATGTTTAGATAATTGGAAATGGGTAATGGAATGGTCTGAAATGATTCCTGCACATACGATGGCTCAGTTATTAGATCAAAGTTTCTTTCCTAAATGGCTACAAACGCTCAATGCTTGGTTGCATATGAACCCAGATAACGATCAAATTAACCAATGGTTTAACGGCTGGAAAAGTCTAATACCTGATAATATCAAAGCTCAACCTATTGTCAATGATCATATTACGTCTGCCATGAATATGATAAGTCTCGCTCGAGGTGGTCCTGCAATAGTATTAGAGGAACGTAAATCGAGAATACCTAATCCAAAAGATTCCATCGAAGAATTAAACAGAATGTCTCAACAACACTTATCAATGAAGGATCGAATTCAAATGAGATGTGAAGAAAAAGGTGTACTCTGGATACCAGTTCCTAATCGTTATATCGAAGCCAAGCAAGTGTACAAATGTGGAAAATTACACGCGTACATAGATGGAAATATCGTCTTCGTTAGTCAAGGTGGCGGATCTTTTACACCGATGTCTTGGCAAGAGATGTTGGAGAACGCTGTTTGa
- Protein Sequence
- MADEEFIKFEITDEDLNNEFSQHRTHRLSKHQQIYGIWADPGGSDGSDEERRDRKHFKGKKNYQAPVNFIAGGIHQPGAKPAEIHDDGRNKEDDDEPEVVSDSSEEELVRPSFGRKNKTNFPDFNEFNPSEMAGFRKAGPKEQNITLVDKGVGNWEKHTRGIGAKLLLQMGYQPGKGLGKDLQGIQAPIEAHLRKGRGAIGAYGPEKKTKVSKIDKSKGDEIEIDKVEKSERTSLWRKEGVEAKKKIRYVYKSIDEVIEESKKPGKKKMEISELSKVKVIDMTGPEQRVLSGYHAISGVQKPAEEWELRKDKKFSNFSMPELQHNLNLLVDVSEQAIIDNDKKMKQAEERIKVLENQAKNLSQTLNRDKMLIDNFHKMLDMVNSVVKSSKDKTLTLDRAEEIFSSMKENHFTEFCIYEVPVLAVNIVRPLLKDHLENWKPLEEPTRPIPEFLKWRTILQLEDSGQTLLNPYYKLMWDVWVPCVRSTAESWQCRQWSPMVDFIMNWIPFISKGILENNLQDILLRRIQQDVDEWNPLTDCVPIHSWIYPWINFLGKNFETSVYPTIRHKLSKALISWHPSDGSARLMLQPWMSVFEPGEMNAFLVNNIVPKLRSTLLDFVVNPHQQCLDNWKWVMEWSEMIPAHTMAQLLDQSFFPKWLQTLNAWLHMNPDNDQINQWFNGWKSLIPDNIKAQPIVNDHITSAMNMISLARGGPAIVLEERKSRIPNPKDSIEELNRMSQQHLSMKDRIQMRCEEKGVLWIPVPNRYIEAKQVYKCGKLHAYIDGNIVFVSQGGGSFTPMSWQEMLENAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01472462;
- 90% Identity
- iTF_01262453;
- 80% Identity
- -