Plon015897.1
Basic Information
- Insect
- Pseudococcus longispinus
- Gene Symbol
- RCOR3
- Assembly
- GCA_900064475.1
- Location
- FIZU01028300.1:28146-30550[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.4 1.2e+04 -3.2 0.3 5 12 31 38 31 39 0.86 2 3 7e-09 9.2e-06 26.1 0.0 2 46 125 169 124 169 0.95 3 3 1.7e-11 2.2e-08 34.5 0.0 3 45 393 435 391 436 0.95
Sequence Information
- Coding Sequence
- ATGTTTTTGGAGTCAAATAtggattatttcaaaaataaaagccCTCCTAGCTCAAACGGAAATGATAACGACAGCGACAGCAATTCTTCGACCGAAGAAGAAGaaaataaaattcgtgTCGGACGAGATTATCAAGCTGTGGTCCCTGATCTCATACCAGAGTCTGaacGAAATTCTGAAGAATATTTAGACAAGGCTTTACTCGTATGGTCTCCGACATATCAAATTAGTGATTTAGAAGTGGACGAATATATTCACttggcaaaaaataattacggcTACAACGGTGAGCAAGCTTTGGGTATGTTATTTTGGCACAAGCACGACTTGCAGCAGGCGATGAACGACTTGGCCAATTTTACTCCGTTTCCTGAGGAATGGACGCCCGAAGATAAAGCACTATTTGAGCAAGCATTCCAGTTTCACGGCAAGAACTTTTACCGAATTAGGCAAATGCTTCCAGAAAAGTCAATTCCTACGTTAGTTAAATATTATTActcttggaaaaaaaccaaGAGTAAAACAAGCCTTATGGATCGCCAAGCTCGTAAATTAGCCATTACGCGGAATAATAACGCTACCGAAGAAGGGGCTGGACCTTCTAGTGATCACGGTTCCGAAGGTGGATCTAATACGGATTCCGATTCCGACGATAAAAAATGGATTATACATCGCGGTATAAGACGTGAAAGTGGTTCACCGCCTCGCCCGTCTTTTCCGAGTGGAGAAAATTCGAAAGATAAGGATAATTCGAACGGTggtcaaaaacaaaacaattctTGTATTAATTGCGGAGTCTTGTGCAACGAAACACACACAACTGCTAAAGGACTAATGTGTCGAACTTGCGCCCTTCATTTCAAGAAAACTGGTAATCCTCGTCCAACTTTTGGACCGGCTCGTGGACGCGCTGAGCGCCATCACGTTTTACCCAGGAACAAATGCACTCCGCCGAGAGGAATGTACATCAATCACGATGATTTGATCGCTATTGCGTCCGGATCCGAGACTCAGCCGGATTATATTCTCAAGTCCATGGATCGTGAGCTTCTAACTCTCAAGCGTATtgttcaaaaTAACAAACAGAGTATCAGTTTGTCTAAAATTAGAACATCCAAAGGGATCGATGCATATAAAAGAATAACCAATTCGCATTCGAACTATCGCATAAGCTCAGCTTGGTCTAACGAAGAAGTGTTGCTCGCTGTGCAGGCTATCCGTAATTTCGGTAAAGATTTTCAAGCTATCGCCGACATCGTCGGTACTAAAACTAAAGCTCACGTGAAGTCATTCTACACCACCAACAGAAAACGTTTCAATTTGGATTTATTATTGCAAGATCACGAAAGAAATTTCGGCGGCCTTCCTAATCGTAATAAACCGACCAACACTGTACAAGTAACCGAAATGGAAATAGAAGAAATATCTTCGGATAGTGACGACGGCGCTCCAAATTCAAACTCATCGCCTTCATCGCCTCTATCGAATGTCAACAATAATAATACAAGCAAAGCTCAAACCGTAGCAGCAAAATGA
- Protein Sequence
- MFLESNMDYFKNKSPPSSNGNDNDSDSNSSTEEEENKIRVGRDYQAVVPDLIPESERNSEEYLDKALLVWSPTYQISDLEVDEYIHLAKNNYGYNGEQALGMLFWHKHDLQQAMNDLANFTPFPEEWTPEDKALFEQAFQFHGKNFYRIRQMLPEKSIPTLVKYYYSWKKTKSKTSLMDRQARKLAITRNNNATEEGAGPSSDHGSEGGSNTDSDSDDKKWIIHRGIRRESGSPPRPSFPSGENSKDKDNSNGGQKQNNSCINCGVLCNETHTTAKGLMCRTCALHFKKTGNPRPTFGPARGRAERHHVLPRNKCTPPRGMYINHDDLIAIASGSETQPDYILKSMDRELLTLKRIVQNNKQSISLSKIRTSKGIDAYKRITNSHSNYRISSAWSNEEVLLAVQAIRNFGKDFQAIADIVGTKTKAHVKSFYTTNRKRFNLDLLLQDHERNFGGLPNRNKPTNTVQVTEMEIEEISSDSDDGAPNSNSSPSSPLSNVNNNNTSKAQTVAAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00194244; iTF_00725452; iTF_01472397; iTF_01263295; iTF_01490915; iTF_01150279;
- 90% Identity
- iTF_01490915; iTF_00194244; iTF_01150279; iTF_00725452; iTF_01472397; iTF_01263295;
- 80% Identity
- -