Tper025699.1
Basic Information
- Insect
- Trionymus perrisii
- Gene Symbol
- RCOR3
- Assembly
- GCA_900050545.1
- Location
- FIZV01027499.1:14388-16887[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.4 1.4e+04 -3.2 0.3 5 12 31 38 31 39 0.86 2 3 6.2e-09 1.1e-05 26.1 0.0 2 46 125 169 124 169 0.95 3 3 1.2e-10 2e-07 31.6 0.0 3 45 392 434 390 435 0.95
Sequence Information
- Coding Sequence
- ATGTTCGTGGAATCAAATAtggattattataaaaataaaagtcctCCCAGTTCAAACGGAAATGATAACGACAGCGACAGCAGTTCTTCAACCGAAGAAGAAGaaaacaaaattcgcgTCGGAAGAGATTATCAAGCTGTGGTTCCGGATCTCATACCAGTGTCAGAACGGAATTCAGAAGAATATTTAGACAAGGCGTTACTTGTTTGGTCTCCAACATATCAAATCAGTGATTTAGAAGtGGACGAATATATTCATTTGGCGAAAAACAATTACGGATACAACGGTGAACAAGCTTTGGGTATGTTATTTTGGCACAAGCACGATTTACAACAGGCGATGAACgatttggccaattttacTCCATTTCCTGAAGAATGGACGCCCGAAGATAAAGCATTATTTGAACAAGCATTCCAATTCCATGGGAAAAACTTTTACCGAATTAGGCAAATGcttcCTGAAAAGTCAATTCCTACGTTAgttaaatattattattcttggaaaaaaactaaaagtagAACCAGCTTGATGGATCGACAAGCTCGTAAATTAGCAATTACGCGGAATAATAATGCCACTGAAGAAGGCGCTGCACCAACGAGTGATCATGGTTCTGAAGGTGCATCTAATACGGACTCGGACTCCGACGataaaaaatggaTAATCCATCGTGGTATAAGACGCGAAAGTGGCTCACCGCCCCGTCAGTCTTTCTCAGGCGCAGAAAATTCGAAAGATAAGGATAATTCGAACGGCGGTCAAAAGCAAAACAATACATGTATTAATTGCGGAGTCTTGTGCAACGAAACACACTCCACTGCTAAAGGACTAATGTGCCGAACCTGCGCTCTTCATTTCAAgaaaactGGCAACACACGTCCTACTTTTGGACCAGCTCGTGGACGCGCTGAGCGTCACCATGTATTGCCTCGGAACAAATGCACTCCGCCCAGGGGAATGTATATTAATCACGATGATTTGATTGCTATCGCATCTGGATCCGAGACTCAGCCCGATTATATTCTCAAATCCATGGATCGTGAGCTTTTGACTCTAAAGCGTATTGTTCAAAACAACAAGCAGAGTATCAGTTCGTCCAAGAGTAGAACATCTAAAGGCATCGAAGCTTTTAAACGCATTACTAATTCGCATACGTACCGTGTAAGCCCGACATGGTCTAACGAAGAAATATTGCTCGCTGTACAGGgTATCCGTAATTTCGGTAAAGATTACCAAGCTATAGCTGACATCGTTGGTACTAAGACTAAAGCTCATGTGAAGTCATTCTACGCTACCAACAGAAGACGTTTCAATTTGGATTTATTATTACAAGATCACGAAAGAAATTTCGGTGGACTTCCTCATCCTCGATCCCCACCAAGTCTATCAACGACCGATATGGACGTCGTAGAAGAAATATCTTCAGATAGTGACGACGGCACTGCGAATTCCAATTCGTCGCCTTCATCTCCTTTATCGAATACcaacaataataatacaaGTAAAGCTCAAACCGTAGCTGCCAAATGA
- Protein Sequence
- MFVESNMDYYKNKSPPSSNGNDNDSDSSSSTEEEENKIRVGRDYQAVVPDLIPVSERNSEEYLDKALLVWSPTYQISDLEVDEYIHLAKNNYGYNGEQALGMLFWHKHDLQQAMNDLANFTPFPEEWTPEDKALFEQAFQFHGKNFYRIRQMLPEKSIPTLVKYYYSWKKTKSRTSLMDRQARKLAITRNNNATEEGAAPTSDHGSEGASNTDSDSDDKKWIIHRGIRRESGSPPRQSFSGAENSKDKDNSNGGQKQNNTCINCGVLCNETHSTAKGLMCRTCALHFKKTGNTRPTFGPARGRAERHHVLPRNKCTPPRGMYINHDDLIAIASGSETQPDYILKSMDRELLTLKRIVQNNKQSISSSKSRTSKGIEAFKRITNSHTYRVSPTWSNEEILLAVQGIRNFGKDYQAIADIVGTKTKAHVKSFYATNRRRFNLDLLLQDHERNFGGLPHPRSPPSLSTTDMDVVEEISSDSDDGTANSNSSPSSPLSNTNNNNTSKAQTVAAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01262392;
- 90% Identity
- iTF_01262392;
- 80% Identity
- -