Fvir001022.1
Basic Information
- Insect
- Ferrisia virgata
- Gene Symbol
- RCOR3
- Assembly
- GCA_900060175.1
- Location
- FIZR01020800.1:108427-110893[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-09 7.8e-06 26.1 0.0 2 46 125 169 124 169 0.95 2 2 1.3e-11 1.5e-08 34.8 0.0 3 45 393 435 391 436 0.95
Sequence Information
- Coding Sequence
- ATGTTTTTGGAATCAAGTATggattattacaaaaataaaaatcctctTAGCTCAAACGGAAATGATAACGAAAGCGACAGCAGTTCTTCGGCCGAAGAAGAAGaaaataaaattcgagtCGGGAAAGATTATCAAGCTGTAGTTCCAGATCTCATACCAGAAGCTGAACGGAATTCAGAAGAATACTTGGACAAAGCTTTGCTGGTTTGGTCACCAACATATCTAATTAGTGATTCagaagtGGATGAATATATTCATTTAGCGAAAAATAACTATGGCTATAATGGTGAACAAGCTTTAGGTATGTTATTTTGGCACAAGCATGATTTACAACAGGCAATGAACGACTTGGCAAATTTTACTCCATTTCCTGAAGAATGGACGCCTGAAGATAAAGCACTATTTGAACAAGCATTCCAATTTCATGGGAagaatttttaccgaattagGCAGATGCTTCCAGAAAAGTCAATTCCTACATTAGTTAAATATTACTATTCttggaaaaaaactaaaagtaGAACCAGCTTGATGGATCGACAAGCTCGTAAATTAGCTATTACACGAAATAATAATGCCACTGAAGAAGGTGCGGGACCTGTTAGTGATCATGGTTCGGAAGGTGGATCCAATACGGATTCGGATTCGGACGacaaaAAGTGGATAATACACCGTGGTATACGACGTGAAAGTAGTTCACCGCCTCGCCCGTCTTTCTCTAGCGGAGAAAATTCGAAAGATAAGGATAATTCCAATGGTGGTCAAAAACAGAACAATACTTGTGTTAATTGCGAGGTCTTGTGTAACGAAACACACTCCACTGCTAAAGGACTAATGTGCCGAACTTGTGCTCTTCATTTCAAGAAAACTGGTAATCCTCGTCCGACATTTGGTCCGGCTCGTGGTCGCGCTGAGCGCCATCATGTTTTACCGAGAAACAAATGCACCCCACCCAGAGGAATGTATATTAATCACGATGATTTGATTGCCATTGCATCTGGGTCAGAGACACAGCCGGATTATATTCTTAAATCCATGGATCGTGAGCTTTTAACTCTGAAGCGCATTGTGCAAAATAATAAGCAGAGCATTAGCTCCGCTAAAAGTAGAACATCTAAGGGGATTGATATTTACAAACGTATAACTAATTCACATTCAAACTATCGTCTTAATCGAGAGTGGACTAACGAAGAAATATTGCTTGCCGTGCAggGTATTCGTAATTTCGGAAAAGATTTTCAAGCAATTGCAGATATAATTGGTACGAAAACTAAAGCTCACGTAAAGTCTTTCTACGCTACTAATAGAAAACGGTTCAATTTGGATTTATTATTGCAAGAtcacgaaagaaattttggaGGACTTCGTGACCGTAACACTTCAACCAACACTGTTAAAGTAGCTGAgGTGGACATTGTGGAAGAAATATTATCTTCGGATAGTGATGATGGTACTGCGAATTCATCGCCTGCATCTCCTTTGTCAAAtatcaacaataataatactaGTAAAGCTCAAACTGTGGCAGCGAAATGA
- Protein Sequence
- MFLESSMDYYKNKNPLSSNGNDNESDSSSSAEEEENKIRVGKDYQAVVPDLIPEAERNSEEYLDKALLVWSPTYLISDSEVDEYIHLAKNNYGYNGEQALGMLFWHKHDLQQAMNDLANFTPFPEEWTPEDKALFEQAFQFHGKNFYRIRQMLPEKSIPTLVKYYYSWKKTKSRTSLMDRQARKLAITRNNNATEEGAGPVSDHGSEGGSNTDSDSDDKKWIIHRGIRRESSSPPRPSFSSGENSKDKDNSNGGQKQNNTCVNCEVLCNETHSTAKGLMCRTCALHFKKTGNPRPTFGPARGRAERHHVLPRNKCTPPRGMYINHDDLIAIASGSETQPDYILKSMDRELLTLKRIVQNNKQSISSAKSRTSKGIDIYKRITNSHSNYRLNREWTNEEILLAVQGIRNFGKDFQAIADIIGTKTKAHVKSFYATNRKRFNLDLLLQDHERNFGGLRDRNTSTNTVKVAEVDIVEEILSSDSDDGTANSSPASPLSNINNNNTSKAQTVAAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01262392;
- 90% Identity
- iTF_01262392;
- 80% Identity
- -