Tman010175.1
Basic Information
- Insect
- Trabutina mannipara
- Gene Symbol
- RCOR3
- Assembly
- GCA_900080175.1
- Location
- FKYK01013536.1:1049-3523[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.3 9.5e+03 -3.1 0.3 5 12 25 32 25 33 0.86 2 3 6.9e-09 7e-06 26.1 0.0 2 46 119 163 118 163 0.95 3 3 2.2e-11 2.2e-08 34.1 0.0 3 45 387 429 385 430 0.95
Sequence Information
- Coding Sequence
- ATggattattacaaaaataaaagtccTCCCAGCTCAAACGGAAATGATAACGACAGCGACAGCAGTTCTTCAACCGAAGAAGAAGaaaacaaaattcgcGTCGGGAGAGATTATCAAGCTGTAGTTCCAGATCTCATACCAGAGTCTGaaCGAAATTCAGACGAATATTTGGACAAGGCGTTACTCGTGTGGTCTCCAACATATCAAATTAGTGATTCAGAAGTCGATGAATACATTCACttggcgaaaaataattacggtTACAATGGCGAGCAAGCTTTGGGCATGTTGTTTTGGCACAAGCACGATTTACAACAAGCGATGAATGATTTGGCCAATTTTACTCCGTTTCCTGAGGAGTGGACGCCTGAAGATAAAGCATTATTTGAACAAGCATTCCAATTTCATGGGAAGAACTTTTACCGCATTAGGCAAATGCTTCCTGAGAAGTCAATTCCTACCTTAGTTAAATATTActattcttggaaaaaaactaagaGTAGAACGAGCTTAATGGATCGACAAGCTCGTAAATTAGCAATCACACGAAATAATAATGCCACCGAAGAAGGCGCTGCGCCAACTAGTGATCATGGTTCCGAAGGTGGATCCAATACAGATTCAGACTCTgacgaaaaaaaatggaTAATTCATCGCGGTATAAGACGTGAAAGTGGCTCACCACCTCGTCAGTCGCTCTTAGGAGGGGAAAATTCGAAAGATAAGGATAATTCGAACGGTGGTCAAAAGCAGAACAATACGTGTGTTAATTGCGGAGTTTTGTGCAACGAAACACACTCTACTGCTAAGGGACTAATGTGCCGAACTTGCGCTCTTCATTTCAAGAAAACTGGTAACCCTCGCCCGACTTTTGGACCGGCTCGTGGACGCGCTGACCGCCATCACGTATTACCCAGGAACAAATGCACTCCGCCAAGAGGAATGTATATTAATCACGATGATTTGATCGCTATCGCGTCCGGATCCGAAACTCAACCGGATTATATTCTCAAGTCCATGGATCGTGAGCTTTTAACTCTGAAGCGCATTGTTCAAAACAATAAACAGAGTATCGGTTCGTCTAAAAGTAGGACATCTAAAGGAATCGAAACTTATAGACGGATAACAAATTCACATTCGAACTATCGTGTTAACCCCACATGGTCTGACGAAGAAGTTTTGCTCGCTGTACAGGCTATCCGTAATTTCGGTAAAGATTTTCAAGCGATAGCTGATATCGTGGGAACCAAGACTAAAGCTCACGTAAAGTCATTTTACACGACCAACAGAAAACGTTTCAGTTTGGATTTATTATTACAAGATCACGAAAGAAATTTCGGAGGACTTCCTCGTTCTCCGCCGAGTAGTGTTACAGTGACCGAGatggACATCGTTGAAGAGATATCTTCAGACAGCGACGAGGGCAATGCGAATGCCAATTCGTCGCCTTCATCCCCTTTATCGAATACCAACAACAATAATACAAGTAAAGCTCAAACCGTAGCAGCCAAATGA
- Protein Sequence
- MDYYKNKSPPSSNGNDNDSDSSSSTEEEENKIRVGRDYQAVVPDLIPESERNSDEYLDKALLVWSPTYQISDSEVDEYIHLAKNNYGYNGEQALGMLFWHKHDLQQAMNDLANFTPFPEEWTPEDKALFEQAFQFHGKNFYRIRQMLPEKSIPTLVKYYYSWKKTKSRTSLMDRQARKLAITRNNNATEEGAAPTSDHGSEGGSNTDSDSDEKKWIIHRGIRRESGSPPRQSLLGGENSKDKDNSNGGQKQNNTCVNCGVLCNETHSTAKGLMCRTCALHFKKTGNPRPTFGPARGRADRHHVLPRNKCTPPRGMYINHDDLIAIASGSETQPDYILKSMDRELLTLKRIVQNNKQSIGSSKSRTSKGIETYRRITNSHSNYRVNPTWSDEEVLLAVQAIRNFGKDFQAIADIVGTKTKAHVKSFYTTNRKRFSLDLLLQDHERNFGGLPRSPPSSVTVTEMDIVEEISSDSDEGNANANSSPSSPLSNTNNNNTSKAQTVAAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01262392;
- 90% Identity
- iTF_01262392;
- 80% Identity
- -