Paka009150.1
Basic Information
- Insect
- Propsilocerus akamusi
- Gene Symbol
- grn
- Assembly
- GCA_018397935.1
- Location
- CM031469.1:9651591-9680727[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-19 3.2e-16 58.3 4.7 1 35 254 287 254 288 0.98 2 2 6.3e-18 1.1e-14 53.4 6.9 1 35 314 347 314 348 0.97
Sequence Information
- Coding Sequence
- ATGCCCTCCTCACACGTTTCAACGCCGCAAGTGTGTCGACCCCATTTTCATGCGCCGCTGCCGTGGTCATTAAGCGACCCACCTAAACCGCTTTCATCGGGGAGTGCTTGGGGCTCGCCATTCGCATGCCCTCAGGATCCACAAGATAGTAAATTAGTTGGTCAGATACAAAATAGTCAGAGCAGTAGTGGCCAACATTTATTTTCATTTCCACCCACGCCACCAAAAGATTCAACACCTGATTCAGTACAAACGACTGACTATCAAGCCGCAGTAAATGTTTTTATGCATCAAGCTCAAGCATCCTCAAATAGCCAATTGAATGGAAATGATACGAGTTCGAGTTGCGGACTCGACGTGAAACCGTGCCTATCGGGCTCGGGCAGTGGACAGTCGCAACAGCCAAAACAACGTGAAGGTACGCACCAATCACAGAGTACTAATAGTCAAACTAGCAATACGAATAGTCAAAATCTAAATCATTCGAATGCATCGTCCATTCATAATGGAAATGCAGGCGGCAATACAACAACAGCGCACCATCAACAACAGCAACATGGTGCATTAAATAGTGGAATCTTTGATTCGGCCCATCAAGCATCATACGGTGCATATGAGAGTGGATATTTGGGCTATCCGCAATCAACGAATAGTGTATTTCAATCAAATATGCGCTCATCGGCAATGAATAACAATAGTCCCTCATCAAATCATAAACCACAACGTACAAAAGCGAGAACTAGTGCTGAAGGTCGAGAGTGCGTTAATTGTGGAGCAACGTCAACGCCACTATGGCGACGTGATGGAACTGGACATTATTTGTGCAATGCCTGCGGATTATACTACAAAATGAATGGACAAAATCGGCCGCTCATCAAACCCAAACGAAGACTTAAATTACAGTCACTGCAAAGTGCCGCACGTCGAGCTGGTACGTCCTGTGCAAACTGCAAAACGACAACAACAACGCTTTGGCGACGAAACCAAGGAGGCGAGCCGGTTTGTAATGCATGCGGACTCTACTACAAGCTTCATAATGTAAATCGACCATTAACGATGAAAAAGGAAGGAATTCAAACAAGAAATCGCAAGCTGTCGTCTAAATCGAAGAAGAAGAAAGGTGTCGGCGGTTGTCTTCCGATTGGTAGTCATTTAGGTGATTTAATGAAACCTCTCGATGCAAAACCATTCCCAGGCGGCTTTTCAGCATCAATGGGACAACATGGACATTTATCAGGCGGCTTACATCCAGCACATACACACATGCATGGTGGCTGGTACACAGGAATGGGAGCACTCGGTGCAACGAGTAGTTTACAAAGTGGATTCGCTGCAGCTGGTTCGCTTGGTGGCGGCGTTGTGCCACATTCGCAAGGTTATCACTTAGGACTAAATTCAATGGGCGCTTGGCGTTCAGAATACACATGA
- Protein Sequence
- MPSSHVSTPQVCRPHFHAPLPWSLSDPPKPLSSGSAWGSPFACPQDPQDSKLVGQIQNSQSSSGQHLFSFPPTPPKDSTPDSVQTTDYQAAVNVFMHQAQASSNSQLNGNDTSSSCGLDVKPCLSGSGSGQSQQPKQREGTHQSQSTNSQTSNTNSQNLNHSNASSIHNGNAGGNTTTAHHQQQQHGALNSGIFDSAHQASYGAYESGYLGYPQSTNSVFQSNMRSSAMNNNSPSSNHKPQRTKARTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLKLQSLQSAARRAGTSCANCKTTTTTLWRRNQGGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGVGGCLPIGSHLGDLMKPLDAKPFPGGFSASMGQHGHLSGGLHPAHTHMHGGWYTGMGALGATSSLQSGFAAAGSLGGGVVPHSQGYHLGLNSMGAWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01250744; iTF_01353403; iTF_00347204;
- 90% Identity
- iTF_01353403; iTF_00347204;
- 80% Identity
- -