Pvan005180.1
Basic Information
- Insect
- Polypedilum vanderplanki
- Gene Symbol
- grn
- Assembly
- GCA_018290095.1
- Location
- CM031381.1:17052064-17099360[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-19 4.7e-16 58.1 4.7 1 35 339 372 339 373 0.98 2 2 5.8e-18 1.7e-14 53.1 6.9 1 35 399 432 399 433 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACATCAACAGCAGAAGCGAGTCGCTGGTATGGGAATCAAAGGCTTCCCGGTTCACCCAATACAGCACTTGCTCATCAGAATGCAAGCGGTTCGGCGGGCGGCAGTGTTGATGCATCAGAAATGAGCGCATATTATGCATTAGAAAATAGCAATGCACATCGGAGATATTATTCTGCAGCTGCCAGCTACAGTCCACACACATCACGAATGCCCTCGTCACACGTCTCAACGCCGCAAGTCTGTAGACCACATTTTCATGCACCACTTCCGTGGTCGTTAAGTGATCCACCTAAACCACTGACGTCGAGTAGTGCATGGGGATCGCCATTTGCCTGTCCACAAGATCCACAAGATAGTAAATTAGTTGGGCAAATACAAAATAATCAGAGTAGTAGCGGgcaacatttattttcatttccaccGACACCACCTAAGGATTCAACACCTGACTCAGTACAAACCGGACCGACTGACTATCAAGCGGCCGTAAATGTTTTTATGCATCAAGCTCAAGCGTCCACCAATAGCCAACTAAATGGAACTGATACAAGCTCAAGTTGTGGTCTCGATGTGAAGCCCTGCCTCTCAGGAAATAATGGCAATGGAAGTGGTGGTGGCAGCGGTAGTGCACAGCAATCACAACAAGCGCCAAAACAACGTGAAGGTACTAGCAATAGTCAAAATTCTACTAGCAATAATAGCAATTCAAatagtcaaaatttaaataataataataatcacaCATCCGTACATgcaagtaataataataatagtagcAATAACACGACCACTGCTCATCACCAACAACATAGTCTGTTTGATTCTGCATCACATCAAACGGCATCTTCGTATGGTGCCTATGAGAATAGCTATCTTGGCTATCCGCAATCAACCAACAGCgtatttcaatcaaatataCGCTCATCTACGATGAACAACAATAGTCCATCATCGAACCACAAACCGCAACGCACAAAAGCGAGAACAAGTGCCGaaGGTAGAGAATGTGTAAATTGTGGTGCTACATCGACACCTTTATGGAGAAGgGATGGAACTGGTCACTATTTGTGCAATGCCTGTGGATTATACTATAAAATGAATGGACAGAATCGTCCACTTATCAAACCTAAACGAAGACTTAAACTGCAATCATTACAAAGTGCAGCTCGACGTGCAGGTACATCCTGTGCGAATTGTaagacaacaacaacaacactGTGGCGAAGGAATCAAGGTGGTGAACCTGTTTGCAATGCCTGTGGACTTTACTATAAATTACATAATGTAAATCGACCATTAACGATGAAGAAGGAGGGAATACAGACAAGAAATCGCAAATTGTCGTCAAaatcaaagaagaagaagggtGTTGGTGGATGTCTTCCGATTGGAAGTCATTTAGGTGATCTGATGAAACCTCTCGATACGAAACCCTTCCCCAGTGGCTTTTCAACATCAATGGGACAACATGGTCATCTCTCAGGAGGCCTACATCCCGCACATACACATATGCATGGTGGTTGGTCAGGATGGCCTAGTGCATTAGGTGCATCGAGTAGTCTACAAAGTGGTTTTGCTACTGCTGGGTCTTTGAGTGGTGGTGTAGTGCCTCATTCACAATCTTATCATCTCGGGCTCAATTCAATGGGAGCATGGCGATCAGAATACACATGA
- Protein Sequence
- MDMTSTAEASRWYGNQRLPGSPNTALAHQNASGSAGGSVDASEMSAYYALENSNAHRRYYSAAASYSPHTSRMPSSHVSTPQVCRPHFHAPLPWSLSDPPKPLTSSSAWGSPFACPQDPQDSKLVGQIQNNQSSSGQHLFSFPPTPPKDSTPDSVQTGPTDYQAAVNVFMHQAQASTNSQLNGTDTSSSCGLDVKPCLSGNNGNGSGGGSGSAQQSQQAPKQREGTSNSQNSTSNNSNSNSQNLNNNNNHTSVHASNNNNSSNNTTTAHHQQHSLFDSASHQTASSYGAYENSYLGYPQSTNSVFQSNIRSSTMNNNSPSSNHKPQRTKARTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLKLQSLQSAARRAGTSCANCKTTTTTLWRRNQGGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGVGGCLPIGSHLGDLMKPLDTKPFPSGFSTSMGQHGHLSGGLHPAHTHMHGGWSGWPSALGASSSLQSGFATAGSLSGGVVPHSQSYHLGLNSMGAWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01257631;
- 90% Identity
- -
- 80% Identity
- -