Sate005900.1
Basic Information
- Insect
- Smittia aterrima
- Gene Symbol
- grn
- Assembly
- GCA_033063855.1
- Location
- CP093830.1:4909306-4948868[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-19 4.6e-16 58.1 4.7 1 35 333 366 333 367 0.98 2 2 8.6e-18 1.7e-14 53.1 6.9 1 35 393 426 393 427 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACATCGACAGCAGAAGCGAGTCGTTGGTACGGCAATCAACGATTGCCAGGATCGCCAAACACAGCCTTATCAGCACATCAAAACGCTGGTGGCTCGGCTGGTAGTGTTGACGCATCTGAGATGAGCGCGTACTATGCTTTAGAGAACAGCAATGCTCATCGGAGATATTATTCGGCAGCAGCTGGCTACAGTCCTCACACATCACGAATGCCCTCATCACACGTCTCGACGCCTCAAGTGTGTCGACCACATTTTCATGCGCCCCTACCTTGGTCATTAAGTGATCCACCTAAGCCTTTGTCGTCAGGCAGTGCATGGGGATCGCCATTTGCTTGTCCACAGGATCCACAAGACAGCAAACTCGTTGGACAACTTCAGAATAGTCAGAGTAGTAGTGGGCAgcatttgttttcgtttccgCCAACGCCACCAAAAGATTCAACACCTGATTCAGTACAAACCGGACCAACCGCAGACTATCAAGCCGCTGTTAACGTCTTTATGCATCAAGCTCAAGCATCCTCAAATAGCCAACTGAATGGAAACGATACAAGTTCGAGTTGTGGCCTCGATGTGAAGCCGTGCTTGTCGGGCTCGGGGAATGGCGGTCAATCGCAACAACCGCCAAAACAGCGTGAAGGTACGCACCAATCGCAGAGTACTAATAGTCAAAATAATAGCAGTAATAGCAATTCAAATAGTCAAAGTCTAAATAATCATTCAAATGCATCGCATAATGGAAATGCAGGAAACAATACGACAACTGCACACCATCAACAACATAGCGCATTGAATGGCAGTCTTTTCGACTCCGCGCATCAAACGTCGTCGTACGGAGCTTACGAGAGCGGCTATCTCGGCTATCCGCAATCGACCAACGGCGTATTTCAATCCAACATACGCTCGTCGACTATGAATAACAATAGTCCATCATCGAACCATAAACCGCAACGCACAAAAGCGAGAACAAGTGCTGAAGGTAGAGAATGTGTAAATTGTGGAGCAACATCAACGCCGCTCTGGAGAAGGGACGGAACTGGTCACTACTTGTGCAATGCCTGTGGATTATATTATAAGATGAATGGACAGAATCGTCCACTTATCAAACCGAAACGAAGACTTAAACTGCAGTCACTTCAAAGTGCGGCACGTCGCGCTGGAACATCCTGTGCAAACTGCAAGACAACAACTACAACACTCTGGCGAAGGAATCAAGGTGGCGAGCCAGTTTGCAATGCCTGCGGACTTTACTATAAATTACACAATGTAAATCGACCGTTAACGATGAAGAAGGAGGGAATTCAAACACGGAACCGTAAGTTGTCATCgaagtcgaagaagaagaaaggcGTTGGTGGATGTCTTCCTATGGGACATTTGGGTGATTTGATGAAGCCTCTTGATGCCAAACCCTTCCCAAGCGGTTTCTCCGCCTCAATGGGACAACACGGTCATCTGTCGTCTGGCCTTCATCCTGCTCACACGCACATGCATGGAGGTTGGTACACGGGAATGGGAGCACTTGGAGCATCGAGTAGCCTTCAAAGTGGATTTGCATCAGCTGGCTCACTCGGCGGTGGTGTTGTGCCTCACTCGCAGTCCTATCATTTAGGATTGAACTCAATGGGAGCATGGAGATCCGAATACACATGA
- Protein Sequence
- MDMTSTAEASRWYGNQRLPGSPNTALSAHQNAGGSAGSVDASEMSAYYALENSNAHRRYYSAAAGYSPHTSRMPSSHVSTPQVCRPHFHAPLPWSLSDPPKPLSSGSAWGSPFACPQDPQDSKLVGQLQNSQSSSGQHLFSFPPTPPKDSTPDSVQTGPTADYQAAVNVFMHQAQASSNSQLNGNDTSSSCGLDVKPCLSGSGNGGQSQQPPKQREGTHQSQSTNSQNNSSNSNSNSQSLNNHSNASHNGNAGNNTTTAHHQQHSALNGSLFDSAHQTSSYGAYESGYLGYPQSTNGVFQSNIRSSTMNNNSPSSNHKPQRTKARTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLKLQSLQSAARRAGTSCANCKTTTTTLWRRNQGGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGVGGCLPMGHLGDLMKPLDAKPFPSGFSASMGQHGHLSSGLHPAHTHMHGGWYTGMGALGASSSLQSGFASAGSLGGGVVPHSQSYHLGLNSMGAWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01257631;
- 90% Identity
- iTF_01257631;
- 80% Identity
- -