Cmar003112.1
Basic Information
- Insect
- Clunio marinus
- Gene Symbol
- grn
- Assembly
- GCA_900005825.1
- Location
- CVRI01000006.1:947632-998519[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-19 5.6e-16 58.1 4.7 1 35 336 369 336 370 0.98 2 2 5.7e-18 2e-14 53.1 6.9 1 35 396 429 396 430 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACATCGACAGCAGAAGCAAGTCGTTGGTACGGTAACCAGAGATTGCCTGGATCACCCAACACAGCCTTATCAGCACATCAGAATGCTGGTGGCTCGGCTGGGGGGGTCGACGCTTCAGAAATGAGTGCTTATTATGCTTTGGAAAACAGCAATGCCCATCGGAGATATTATTCGGCAGCTGGTTACAGCCCTCACACATCAAGAATGCCCTCGTCGCATGTCTCAACGCCCCAAGTGTGTCGACCACATTTTCATGCACCATTACCGTGGTCTTTAAGTGATCCACCTAAGCCATTAACATCGGGAAGTGCTTGGGGATCACCTTTCGCTTGCCCACAAGATCCGCAAGATAGCAAACTCGTTGGACAACTTCAGAATAGTCAAAGTGGTAGTGGACAACATCTATTCTCGTTTCCACCAACTCCACCAAAAGATTCAACCCCTGACTCAGTACAAACCGGACCAACCGCCGACTACCAAGCCGCTGTTAATGTTTTTATGCATCAAGCTCAAGCATCCTCAAATAGCCAATTGAATGGAACTGATACAAGTTCAAGTTGTGGTCTCGATGTGAAGCCTTGCTTATCAGGATCGGGGAATAGTGGTGGTCAATCGCAACAACCTCCAAAACAGCGTGAAGGTACGCACCAATCACAAAGTACTAATAGTCAAAATAGTAGCAGTAATAATAGCAATACAAATAGTCAAAGTCTAAATAACCATTCAAATGCATCGTCAGTACACAATGGAAGTGCAGGTAACAACACCACAACTgcacatcatcaacaacatagTGCATTGAATGGTAGTCTTTTTGATTCAACACATCAAACATCATCGTACGGTGCCTACGAAAGTGGTTATCTCGGATATCCACAATCTACTAACAGCGTCTTTCAATCCAACATTCGTTCGTCGGGAATGAATAGCAATAGTCCATCATCCAACCACAAACCACAACGAACAAAAGCGAGAACAAGTGCTGaAGGTAGAGAATGTGTAAATTGTGGAGCAACTTCAACGCCACTGTGGAGAAGAGATGGAACTGGTCATTACTTGTGCAATGCCTGTGGATTATATTATAAGATGAATGGACAGAATCGTCCGCTTATCAAACCGAAACGAAGACTTaAATTGCAGTCACTTCAAAGTGCAGCACGGCGCGCTGGAACATCCTGTGCAAATTGCAAAACAACCACAACAACACTATGGAGAAGGAATCAAGGTGGTGAACCAGTTTGCAATGCCTGCGGACTCTACTATAAATTACACAACGTAAATCGACCGTTAACgatgaagaaagaaggaaTTCAGACACGAAATCGTAAGTTGTcatcaaaatcaaagaaaaagaaaggcGTTGGTGGATGTCTTCCTATGGGTCATTTGGGTGATTTGATGAAGCCACTGGATGCCAAACCATTTCCAGGTGGATTTTCCGCTTCGATGGGCCAACATGGACATCTCTCTAGCGGTTTACATCCAGCTCACACTCACATGCATGGTGGATGGTACACGGGAATGGGTGCACTTGGAGCATCGAGTAGCCTTCAAAGTGGATTTGCATCAGCTGGTTCCCTTGGTGGTGGTGTTGTGCCACATTCGCAGTCTTATCATCTAGGACTCAATTCAATGGGCGCATGGAGATCTGAATACACATGA
- Protein Sequence
- MDMTSTAEASRWYGNQRLPGSPNTALSAHQNAGGSAGGVDASEMSAYYALENSNAHRRYYSAAGYSPHTSRMPSSHVSTPQVCRPHFHAPLPWSLSDPPKPLTSGSAWGSPFACPQDPQDSKLVGQLQNSQSGSGQHLFSFPPTPPKDSTPDSVQTGPTADYQAAVNVFMHQAQASSNSQLNGTDTSSSCGLDVKPCLSGSGNSGGQSQQPPKQREGTHQSQSTNSQNSSSNNSNTNSQSLNNHSNASSVHNGSAGNNTTTAHHQQHSALNGSLFDSTHQTSSYGAYESGYLGYPQSTNSVFQSNIRSSGMNSNSPSSNHKPQRTKARTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLKLQSLQSAARRAGTSCANCKTTTTTLWRRNQGGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGVGGCLPMGHLGDLMKPLDAKPFPGGFSASMGQHGHLSSGLHPAHTHMHGGWYTGMGALGASSSLQSGFASAGSLGGGVVPHSQSYHLGLNSMGAWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01257631;
- 90% Identity
- iTF_01257631;
- 80% Identity
- -