Pcoq023905.1
Basic Information
- Insect
- Proctacanthus coquilletti
- Gene Symbol
- stc
- Assembly
- GCA_001932985.1
- Location
- MNCL01000011.1:1911619-1915668[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.8 2.5e+04 -4.0 1.6 15 19 312 316 311 316 0.81 2 14 0.054 7.2e+02 0.9 0.2 4 10 345 351 344 354 0.95 3 14 4.2e-06 0.056 14.0 15.6 4 19 359 374 356 374 0.93 4 14 2.5e-06 0.034 14.7 14.3 1 18 410 427 404 428 0.85 5 14 9.7e-10 1.3e-05 25.7 13.6 1 19 467 485 467 485 0.98 6 14 0.93 1.2e+04 -3.0 0.5 5 10 515 520 515 520 0.93 7 14 7e-07 0.0093 16.5 14.1 4 18 533 547 526 548 0.86 8 14 0.0039 52 4.5 9.0 1 11 588 598 588 599 0.96 9 14 0.26 3.5e+03 -1.3 0.7 4 10 603 609 602 609 0.92 10 14 3.8e-10 5.1e-06 27.0 14.8 1 18 615 632 615 633 0.97 11 14 2 2.7e+04 -13.0 16.1 10 18 680 689 666 690 0.76 12 14 1 1.4e+04 -3.2 1.3 8 13 695 700 694 701 0.80 13 14 2.8e-08 0.00037 21.0 12.3 1 16 726 741 726 748 0.93 14 14 1.5e-07 0.002 18.7 15.3 1 19 758 777 758 777 0.96
Sequence Information
- Coding Sequence
- ATGTCTGAACTTCCACAATCTGAGCCTGGTGAAAGGAATACGACCAAGAGCAGTAATCCAGGCGAGAACTATGTCGATTTCAACCAGTTCCTCCTACAGCATAATTTGGCCGGACCGGTCGCCGACTTAGCCGCAGCAGGAACTGATATGGCCCACTATTTCGGATTCTTCCCCACTCAGGTGCCTTTCATGCCTGTGCCGAATGTGTTTTATAACGGTTTTGATGCCGCCCCGTACATGTCGGAACTTTCCGACTACCAGAGAGATTTGGCTAGGACATCGAATTTGTTGCCGACAGCGGCTGAATTCATCCCAAGGTTCAATAATCTAGATCTCTCAGAAACAGAGGTGGTGAAAGCTGATCATGTGCCGCCAACGAATGAAGTTCCGTCATCTGAGGCGTTAAACGGAGGTCgaaacagcaacaacaacaacgaggACAAAAATGCGCAAAGAAACCACACTGGGGCTATCAATAAAACCTATGGACGAGGGCGTCACAACGGCGGGGGACGGAATCCCGATTCCAGGTACTACCAAAACGGTAACTACTCAAACCGAAACCGGCAAAACTATGAAAGGAACATGAAGCGCCATGAGAACCACTGGAAAGGTCGGGGAGAATTCCTCGATAACAAGCGGGAGAATGGCTGCTCTGAAGATCAACACCTAGCAAAATCCTCCAGCAAGCAGGAGGTCAATCCGCGGAGCAATGCGATTCCCATTGTAAATGAGGAATCGTTTAATGAGAAACTATCCCAGCGCGAGAAACTAATCCGTGAAATCGAAGGACGTCGACTGGAGTGTCTCGTCTGTGTGGAGCACATAAAAATCCATCAGCCCGTCTGGTCCTGCTCGAGCTGTTACACCATCATTCACCTGAATTGCGTCATCAAGTGGGCGTCCAGCTCGAAATCCAACGACGGCTGGCGTTGCCCCGCTTGCCAGAATGTGACCAAGAACATACCTCGCGACTACTATTGCTTCTGTGGGAAAGTGAAAAACCCCCAGTACAATCGGAGCGATGTAGCCCACAGCTGCGGAGAGGTGTGCGGTCGGAAAAACAATTGTGATCATCCGTGCACCCTCCTTTGCCATCCGGGACCGTGTCCGCCGTGCCAGGCGAACGTGACTCGGTTGTGCGGCTGTGGCAGGACCTCCAAGGTGATGCAGTGTTACATTAAGGAGGATATCGAGTGCGGGACGACTTGTGGGAAATTGCTCAATTGCGAAATTCATTCCTGCGAACGACCGTGCCATCAAGGCAAATGCCCCAAATGTGAAGTGGAAGTCACGCAGAATTGCCACTGTGGGAAGCAGGAGCGAAAAGTGGCCTGCACACGTGAATCAAAGGAGAAGAATTTCTCATGTGGTAAAGCTTGTGGCAAGGATTTGGCTTGTGGTAAGCACAAGTGCAAGGACGTGTGCCACGCTGGTGAATGCAAACCCTGCAAGTTGACTCCTGACGTGGTCACCACGTGTCCATGTGGAAAGACGCCCATTGAGCCTGGTCAGCGGGAGAACTGCCTGCAGCCGATCCCTACGTGCAACAACATTTGTGGGAAGACGTTGAAATGCGGCCAACCAGGTAATCCTCATCGCTGCATCAGCAAGTGTCACACGGGCAACTGTCCACCGTGCAACAAGCAGACTTCGGTGAAATGCCGCTGTGGTCACATGGACCAGATGATCAAATGCCGTCAACTGTCGTCCCGGGCTGATGACGCCCGTTGCAAAAAGCGATGCACCAAGAAGAGAAGTTGCGGCAGGCACAAGTGTAACCAGGAGTGTTGCATCGATATCGACCACGTGTGTCCACAGATCTGCAATTTCACCCTCTCGTGTGGGAAGCACAAATGTGACCGGCCGTGCCACCGCGGCAATTGCCCACCTTGCTACCGGACCTCCTTCGAGGAACTCTACTGCGAGTGTGGGAGTGAAGTTATTTACCCGCCTGTCCCGTGCGGTACTAAAAGACCACCTTGCACAAAACCCTGCTCCCGCCAGCATCCTTGTGATCACCCTGTACAACACAACTGCCACCCCGCCCCGACGTGCCCGCCCTGCATGATATTCACGACGAAATCGTGTCACGGGGGCCATGAGCAACGCAAAACCATTCCATGCAGCCAGGCCTCGTTCAGCTGTGGCATGCCGTGCGGCAAGAAGCTGAGCTGCGGTCGGCACAAGTGCATCAAGCCCTGCCACGAAGGTCCTTGCGAACAGGAGGGGGACATTTGCAAGCAGAATTGCACTCGGACGAGAATAATTTGCGGTCACAAGTGCAACGCTCCGTGCCACGAAGGTGACTGCCCAGAAACTCCATGCAAGGAAATGGTCGAGGTAACATGCGAATGCGGGAACCGCAAGCAAATGCGGATGTGCCACGATTTCTCCAGCGAATTCCGACGGATTGCAACCGCTCAATTGGCGTCCTCCATGCAAGAGATGCAACGTGGAAACATGGTCGAACTGAGCGACATCATGGGCCCCATTAAGATGACCACGAACAAAACACTTGAATGTAACGAGGAGTGCAAGGTACTCGAGAGGAATCGGCGCCTAGCCATCGCCTTACAGTCTCGAAATCCAGAGGTGCCTTCAACGAAAATTCTGACTCGATATTCGGACAACATAAAAGGCTGGGCGAAGAAGGACCTGCAGCTGGTTAAGATGATCCACGATTCTCTTACAAATCTGGTGAAGTTGGCAAAGGAGAGTCCCCAAAGGTCCCGGAGCCATTCGTTCCCGACGATGAATCGAGAAAAACGCGCCCTCGTTCACGAGATGTGCTCCATGTTCGGTGTGGAATCTATCGCATATGATGCGGAACCGAACAGGAACGTTGTTGCTACAGCGTACAAGGACAGGTGCTGGTTGCCTGCCATGAGCATCATGGAAGTGATGCAAAGGGAGAGCGGCCAGAGACGAGTCCCTGTGCCAAACAACAATGCCTGGGGTCTCAAAAGATAA
- Protein Sequence
- MSELPQSEPGERNTTKSSNPGENYVDFNQFLLQHNLAGPVADLAAAGTDMAHYFGFFPTQVPFMPVPNVFYNGFDAAPYMSELSDYQRDLARTSNLLPTAAEFIPRFNNLDLSETEVVKADHVPPTNEVPSSEALNGGRNSNNNNEDKNAQRNHTGAINKTYGRGRHNGGGRNPDSRYYQNGNYSNRNRQNYERNMKRHENHWKGRGEFLDNKRENGCSEDQHLAKSSSKQEVNPRSNAIPIVNEESFNEKLSQREKLIREIEGRRLECLVCVEHIKIHQPVWSCSSCYTIIHLNCVIKWASSSKSNDGWRCPACQNVTKNIPRDYYCFCGKVKNPQYNRSDVAHSCGEVCGRKNNCDHPCTLLCHPGPCPPCQANVTRLCGCGRTSKVMQCYIKEDIECGTTCGKLLNCEIHSCERPCHQGKCPKCEVEVTQNCHCGKQERKVACTRESKEKNFSCGKACGKDLACGKHKCKDVCHAGECKPCKLTPDVVTTCPCGKTPIEPGQRENCLQPIPTCNNICGKTLKCGQPGNPHRCISKCHTGNCPPCNKQTSVKCRCGHMDQMIKCRQLSSRADDARCKKRCTKKRSCGRHKCNQECCIDIDHVCPQICNFTLSCGKHKCDRPCHRGNCPPCYRTSFEELYCECGSEVIYPPVPCGTKRPPCTKPCSRQHPCDHPVQHNCHPAPTCPPCMIFTTKSCHGGHEQRKTIPCSQASFSCGMPCGKKLSCGRHKCIKPCHEGPCEQEGDICKQNCTRTRIICGHKCNAPCHEGDCPETPCKEMVEVTCECGNRKQMRMCHDFSSEFRRIATAQLASSMQEMQRGNMVELSDIMGPIKMTTNKTLECNEECKVLERNRRLAIALQSRNPEVPSTKILTRYSDNIKGWAKKDLQLVKMIHDSLTNLVKLAKESPQRSRSHSFPTMNREKRALVHEMCSMFGVESIAYDAEPNRNVVATAYKDRCWLPAMSIMEVMQRESGQRRVPVPNNNAWGLKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00937703; iTF_01461578; iTF_00936942; iTF_01184209; iTF_01050066; iTF_00628796; iTF_00718204;
- 90% Identity
- -
- 80% Identity
- -