Ncya006779.1
Basic Information
- Insect
- Neoitamus cyanurus
- Gene Symbol
- stc
- Assembly
- GCA_947538895.1
- Location
- OX384544.1:19466727-19470570[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.8 3e+04 -4.0 1.6 15 19 308 312 307 312 0.81 2 15 0.052 8.5e+02 1.0 0.2 4 10 341 347 340 349 0.95 3 15 4.2e-06 0.069 14.0 15.6 4 19 355 370 352 370 0.93 4 15 2 3.3e+04 -4.6 1.0 6 10 396 400 396 400 0.93 5 15 7.1e-06 0.12 13.3 14.4 3 18 408 423 406 424 0.91 6 15 2 3.3e+04 -4.8 1.4 10 13 431 434 429 435 0.70 7 15 5.4e-10 8.8e-06 26.5 12.9 1 19 464 482 464 482 0.98 8 15 1.4e-05 0.23 12.4 16.4 4 18 530 544 523 545 0.86 9 15 0.0039 64 4.6 9.0 1 11 585 595 585 596 0.96 10 15 0.32 5.3e+03 -1.6 0.6 4 10 600 606 599 606 0.91 11 15 3.8e-10 6.2e-06 27.0 14.8 1 18 612 629 612 630 0.97 12 15 2 3.3e+04 -9.3 11.8 10 18 677 686 663 687 0.75 13 15 1 1.7e+04 -3.2 1.3 8 13 692 697 691 698 0.80 14 15 8.3e-06 0.14 13.1 14.9 1 17 723 739 713 745 0.84 15 15 1.3e-07 0.0021 18.9 14.8 1 19 755 774 755 774 0.96
Sequence Information
- Coding Sequence
- ATGTCAGAATTTCCACAATCTGAGAACGGTGAACGGAGTACGGCCAAGAACAACACGACTAGTGGCGAGAACTATGTCGATTTCAACCAGTTTCTACTGCAGCATAACCTCGCTGGGCCAGCAGTAGATTCGGGTGGTGATATGGCTAACTACTTCGGATTCTTCCCCTCTCAGGTGCCTTATATGCCCGTGCCGAATATGTTTTATAATGGTTTTCCGCTTACGGAATACCAGCGGGATTTAGCTCTGTCTTCGAACCTCCTTCCAACGGCTGCCGAATTCATTCCGAGGTTCAGTAATTTAGATATCTCTGAGCCTACAGTGGTTGATCCGGTCCTGTCGGAAGTTTCAAAAACTGACCCTCCGCCAGAAAGTGATGCTGTAGTACCTGAAGCCCCAATCGATGGTCGGAATAACAACGATGAAAATATTTCACAAAGGGGTCAAACCGGGGCCATTAATAAATCATACGGACGGGGACGTAACAACGGTCAGGACCGCTACGGAGGAGGTCGGAATTCAGATTCTAAGTACTACCAGAATGGGAACTACTCAAATAGAAATAGGCAAAATTACGAAAGGAACTTGAAGCGTCACGAAAACCATTGGAAAAGTCGAGGTGAATTCCTTGAAAACAGGCGTGAAAACGGTAACTCAGATGGAAAGCCGTCAAGCAAACTTGAATCTAGTGCCAAGCCCAATGCTATTCCCATTATCAGCGAGGATGCATTCAGCGAAAAATTATCCCAGCGGGAAAAGCTCATCCGAGAAATTGAAGGCCGCCGGTTGGAATGTCTCGTCTGCGTTGAGCCCATTAAAATTCACCAATCGGCGTGGTCCTGCTCCAGCTGCTACACCATCATTCATCTCAATTGCGTCATCAAATGGGCGTCCAGCTCGAAATCCGAGGATGGTTGGCGATGTCCAGCTTGCCAGAATGTAACAAAACACGTACCTCGCGACTACTACTGCTTCTGTGGCAAAGTGAAAAACCCCCAGTACAATCGCAGCGATGTAGCCCACAGCTGCGGAGAGGTCTGTGGCCGAAAAACTAACTGCGATCATCCTTGCACTCTTCTTTGTCATCCCGGGCCATGTCCACCTTGTCAGGCGAATGTGACCCGCATGTGCGGCTGCGGCAGAACTTCAAAAGTTATGCAGTGCTACATTAAGGACGACACTGATTGCGAGGCAACCTGTGAGAAGCTCTTAAACTGCGAGCTCCATACCTGCGATAAGCCGTGCCATCAAGGCAAGTGTCCCAAATGCGAGCACGAGGTTACACAAAACTGCCACTGTGGCAAACAAGACCGACAAGTAGCCTGTACGAGAGAATCAAATGACAAGAAGACTTTTTCTTGTGGAAAACCTTGCAGCCGAGAGCTAGCCTGCGGTAACCACAAATGTAAAGACGTTTGCCACTCCGGTGAGTGTAAGTCCTGTAAGCTGACTCCAGAGATGGTAACGACCTGCCCGTGCGGGAAGATGCCCATTGAGGCTGGTCAGCGGGAAAATTGTCTACAGCCAATCCCAACATGTACTGGCGTTTGCGGCAAGACGTTAAAGTGTGGACAACCAGGCTCTCCTCATCACTGCATCAGTAAGTGCCACTCTGGCAACTGTCCGCCTTGCAACAAGCAGACATCGGTAAAGTGTCGCTGTGGCCACATGGATCAAATGATCAAATGCCGCCAACTATCATCGCGAGCTGACGACGCCCGATGCAAAAAGAGGTGCACAAAGAAGAGAACGTGCGGTAGGCATAAGTGCAACCAAGAATGCTGCATCGACGTCGACCATATCTGTCCGCAGATTTGTAACTTTTCTCTCTCATGTGGGAAGCACAAGTGTGACCGGCCATGTCATCGTGGAAATTGTCCACCGTGCTATAGAAGCTCCTTCGAAGAGCTTTACTGCGAGTGTAGGAGTCAAGTTATCTACCCACCAGTACCATGCGGTACTAAACGGCCACTTTGCACTATGCCATGCTCACGGCAGCATCCATGTGACCATCCTGTACAGCATAATTGTCACTCTGCTTCTACGTGCCCGCCATGTATGATATTCACAACAAAGTCTTGCCACGGAGGACACGAGCAACGCAAAACTATTCCATGCAGCCAATTATCGTTCAGTTGCGGAATGCCGTGTGGCAAGAAATTGAGCTGTGAACGGCACAAATGTATTAAGCCGTGCCACGAAGGTCCTTGCCAGACTGAAGGGGAGATCTGCAAACAGAATTGTACTAAAACGAGGATACTTTGTGGGCACAAATGCAACGCTCCCTGTCACGACGGCGATTGTCCCGAAACGCCTTGCAAGGAGATGATAGAGGTGACTTGTGAGTGCGGAAACCGCAAACAAACGCGATCATGCCAAGACGTTTCGAGCGAATACCGCCGCATCGCAACTGCACAGTTGGCTTCGTCTATGATGGAGATGCAGCGTGGAAATATGGTCGAGTTGAGCGACATCATGGGCCCAATCAAAATGACCAATAACAAAACACTTGAATGCAACGAAGAGTGCAAGGTACTCGAGAGGAATCGGCGCCTGGCCATCGCCTTACAGTCCCGAAACCCAGAGGTGCCTTCAACAAAAATTCTGACACGATACTCGGACAACATAAAAGGCTGGGCGAAGAAGGATCCTCATCTAGTAAAGACGATACACGACGCGTTGACCACACTGGTCAAGTTGGCAAAGGAGAGTCCCCAAAGATCACGGAGCCATTCGTTTCCCACAATGAACCGAGACAAACGCAGTCTTGTTCACGAAATGTGTTCCATGTTCGGAGTGGAATCAGTTGCATATGATGCGGAACCGAACAGGAATGTTGTTGCTACCGCACAAAAGGACAGGTGCTGGCTACCTGCGATGAGCATAATGGAGGTGATGCAGAGGGAGAGCGGCCAGAGAAGGGTCCCAGTCCCCAACAACAATGCTTGGGGTTTGAAGAGATAA
- Protein Sequence
- MSEFPQSENGERSTAKNNTTSGENYVDFNQFLLQHNLAGPAVDSGGDMANYFGFFPSQVPYMPVPNMFYNGFPLTEYQRDLALSSNLLPTAAEFIPRFSNLDISEPTVVDPVLSEVSKTDPPPESDAVVPEAPIDGRNNNDENISQRGQTGAINKSYGRGRNNGQDRYGGGRNSDSKYYQNGNYSNRNRQNYERNLKRHENHWKSRGEFLENRRENGNSDGKPSSKLESSAKPNAIPIISEDAFSEKLSQREKLIREIEGRRLECLVCVEPIKIHQSAWSCSSCYTIIHLNCVIKWASSSKSEDGWRCPACQNVTKHVPRDYYCFCGKVKNPQYNRSDVAHSCGEVCGRKTNCDHPCTLLCHPGPCPPCQANVTRMCGCGRTSKVMQCYIKDDTDCEATCEKLLNCELHTCDKPCHQGKCPKCEHEVTQNCHCGKQDRQVACTRESNDKKTFSCGKPCSRELACGNHKCKDVCHSGECKSCKLTPEMVTTCPCGKMPIEAGQRENCLQPIPTCTGVCGKTLKCGQPGSPHHCISKCHSGNCPPCNKQTSVKCRCGHMDQMIKCRQLSSRADDARCKKRCTKKRTCGRHKCNQECCIDVDHICPQICNFSLSCGKHKCDRPCHRGNCPPCYRSSFEELYCECRSQVIYPPVPCGTKRPLCTMPCSRQHPCDHPVQHNCHSASTCPPCMIFTTKSCHGGHEQRKTIPCSQLSFSCGMPCGKKLSCERHKCIKPCHEGPCQTEGEICKQNCTKTRILCGHKCNAPCHDGDCPETPCKEMIEVTCECGNRKQTRSCQDVSSEYRRIATAQLASSMMEMQRGNMVELSDIMGPIKMTNNKTLECNEECKVLERNRRLAIALQSRNPEVPSTKILTRYSDNIKGWAKKDPHLVKTIHDALTTLVKLAKESPQRSRSHSFPTMNRDKRSLVHEMCSMFGVESVAYDAEPNRNVVATAQKDRCWLPAMSIMEVMQRESGQRRVPVPNNNAWGLKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01256781;
- 90% Identity
- -
- 80% Identity
- -