Basic Information

Gene Symbol
-
Assembly
GCA_030444845.1
Location
JAUDTA010000001.1:1392055-1403075[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 32 8.4e-06 0.0016 20.2 1.0 1 23 261 283 261 283 0.98
2 32 0.012 2.4 10.2 3.7 1 23 306 329 306 329 0.96
3 32 9.5e-05 0.019 16.8 0.5 2 23 336 358 335 358 0.96
4 32 0.0041 0.81 11.7 0.1 1 21 378 398 378 399 0.95
5 32 0.012 2.3 10.2 0.2 2 23 497 518 496 518 0.93
6 32 0.0071 1.4 10.9 0.3 2 23 525 547 524 547 0.91
7 32 9.6e-05 0.019 16.8 0.2 1 23 617 640 617 640 0.96
8 32 0.033 6.4 8.9 1.2 1 23 646 669 646 669 0.95
9 32 0.083 16 7.6 0.8 1 23 682 704 682 704 0.97
10 32 0.01 2 10.4 1.9 3 23 749 770 748 770 0.96
11 32 2 4e+02 3.2 0.4 1 23 803 826 803 826 0.92
12 32 0.29 57 5.9 1.2 2 23 833 856 832 856 0.93
13 32 1.2 2.4e+02 3.9 0.0 2 23 865 887 865 887 0.90
14 32 0.025 4.8 9.3 0.0 2 23 894 916 893 916 0.93
15 32 1.7e-05 0.0034 19.2 1.2 1 23 924 946 924 946 0.98
16 32 0.016 3.2 9.8 1.6 2 23 991 1014 990 1014 0.95
17 32 0.0056 1.1 11.3 1.0 1 23 1017 1040 1017 1040 0.97
18 32 0.00038 0.074 15.0 0.2 2 23 1047 1069 1046 1069 0.96
19 32 0.0012 0.24 13.4 3.9 1 21 1097 1117 1097 1118 0.95
20 32 0.0036 0.7 11.9 1.8 2 23 1132 1153 1131 1154 0.93
21 32 0.48 94 5.2 1.1 1 23 1157 1180 1157 1180 0.94
22 32 0.034 6.7 8.8 2.1 2 23 1187 1210 1186 1210 0.90
23 32 4.1 8e+02 2.3 0.2 2 23 1218 1240 1218 1240 0.94
24 32 4.4 8.6e+02 2.2 0.0 2 23 1247 1269 1246 1269 0.88
25 32 0.3 59 5.8 2.7 2 23 1278 1300 1278 1300 0.96
26 32 0.92 1.8e+02 4.3 0.5 2 23 1306 1328 1305 1328 0.91
27 32 0.0044 0.86 11.6 0.2 1 23 1390 1413 1390 1413 0.95
28 32 8.9e-05 0.017 16.9 0.7 1 21 1440 1460 1440 1461 0.96
29 32 0.43 84 5.4 1.9 2 23 1560 1582 1559 1582 0.94
30 32 1.6 3.1e+02 3.6 0.7 2 23 1589 1611 1588 1611 0.94
31 32 0.93 1.8e+02 4.3 2.5 1 23 1622 1644 1622 1644 0.97
32 32 0.22 44 6.2 0.1 1 19 1648 1666 1648 1669 0.91

Sequence Information

Coding Sequence
atggagagcgcgaggaaCGTAACGATAGCGCCGATGTCGGCGACGACGTCGACGAGGATGACGTCttcgtcgacgacgacgatgccGATGGAGCGGAGGAGATCTTATCACGATCTCTGTCGCCTGTGCGCCTCTTACGACAACGTCAGCATGCACATATTCGGGCAGGAAGGCATAAACCGGCAGCTCGTTGACAAAATCCAGACCTGCCTGCCGTTCAAGATAGAGGAAGACGATCGTTTGCCGAAAGTTCTGTGTTATCGATGCATGTacaatttggaaaatttttacGACTTCAGAACCGCGTGCGTAAACGCGGCCGCTTGGCTGGAAAGAAATAGGCCCAAGGAAGGCACAAACGATGACGGTGCAAATGATAGCGCGCAGTGCAGCGAGATGCACGCGGAGCTTTTCAAGGGAAAGGAAAATATGCCAATATTTATCCCGGAGGCGCCTGTGGTTAATCCGAACGCCGCGTTAGGTACACCGCCGAGATTGAATTCTGACGGTGAGGCCGAGATCGAGCCAGAGATTCTCGACGCGAGCGAAGGTACGGACGAAGTACTCGATGATTCGACGGAGGATCGGCGTTCAGAGATCGATTACGAAGAAGGATATGAGATGGACATGGAGACAAATCCTAGCGACTTCTTAGAAATGACGCCGATGGTAACCGAGGAAAACGAGGAAGAGTGCGTCGCGAACAATACGAGTGCCGCTGCTACCGGTCAGCAAGACGTCGCGGCAGTCTTTCCACCTACGTCGCAGCAGCACGAGGTCTATGTGTGCTCTCTGTGCAACAAGGCGTTTAGCTCCAAGGGTCATCTGTCGCTGCACGCGAGGATTCACGTGGGCGAGGGTGATGTGATCGGTGAAAGGGTCATCACCGACGATCATACCTCGTATCAGCGACCGTACCAATGCGATCTCTGTCACAAATCGTATTCTACTGCGAAGCATCGCTGGGGGCACGTTTCTACGACACATCGaggACATCCTGCGGTAACGTGTGGGTACTGCTCGCGCATATATTCGACGCGATACAACCTTGAGGAGCATATAAAATCGCGACACGCCGGTCTACCGCCACCCCCGGAATTATCGGTTTCCCTTGCCCGCCCGGAGACTCGTTATCAATGTCAAACGTGTCCGATGGTTTATAAAGATCTGGCAGATTTCAACGCGCATCGTCAGATATGCGAGGAACAACGCTCCGATCTATTAGGGCAAGCTGACGCGTCGAACAATAAGAGTGTAATCGATGTGTCCGATATGTCGAGTACTGCAGACTCGGATGACGAGAACAAAGACTTTAGGAGTGCCGAGGCTAAACTGGCCAAGAATCCGAATTTGACTATATTGAAACACGCGTTGACTAAGGGAGACAGTTTAAAACGGAATTACGACGATGATGGTTCAACGTCGAGTTGCAAGACGAGAAAAATGGTCAAGATAGAAGGTGAGACGAATCCTGAGATAAAAAGGTGGTATTGCGAATCTTGTCCGCAAAGTTTCACATCGGTGGACAGTTTAAAGTTGCACGAAGTTAGGCATGATGCCGAGAAGCCGTTTATCTGCATACTATGCAAGAAGGATTTCGTTTTGAAATCCTCATTGATAAGGCACATTACGACGGCACACGGCGTCGATCCTACTCCTATCATCGAGAGCGACAAGTGTCTAAAGACATCTGTGATGCCGCAGAATTGGAATCGAATGGATGTCAGCATTTACGAGCAGAGCGAAATAAAGGAACCACCAGAGTTTTCGTCGTCACCTGAGatAAATTTGGACAATGATGACAAAGACTCGAAAAACAACCACGAGAATGTAGAAATCGAAACAGTATTTATGTGTGAGATTTGTACGAGGGACTTTAATGATCGAGCGTCGTTATGGTTACATATGCGTGCAACGCATAAGGAACTTGCTGCATTCGCCTGTGGAGTGTGTTTAAAGATTTGTAATGATAATACACAACTCCAGAGTCATCTTTACATGTACCACGGAAAATCCAAGCTTTTGATATCGGAACAAAGAAGGTACAGCTGCACAATATGCGGTAGACAGCATGATTCGAGAAAGAAGCTAATCGCTCATGTCTCGATACACAATATCGACTCTGGGTTGGATCCTGCAATTTTTGTACAATTAAacagtaattattataacgaaAACTTAAATGGTACCGAAGGAAATGAGCAAGTAATAGATTTTGATGGAGAAGATAGCGAGAAAGTCGATTGTTACATTTGTTGTAAACCTTTTCCAAGCGAGGATCATCTTATACGACATCAGAGAAATGCGCATaagCCCGAACAGATAATTCCGTCGGGAGACGCCGCGGGAAGTGGAAACGCTGCGAATGTCAACGGCAACGGTAATAGGGCTCAGTATCATTTGTTTTTCGTATGCGAAATCTGCGGTAGTTCTCATTCGAGCAAATGGGAACGTTGGTTGCATATCAACAACATGCATAGTAACGAATCTTCTATCAAGTGCGAATATGAAAACTGTGGGAAGATATTCGCAACAAAATTGTTGCGCAATGACCATTATCAGCATCATTTGATCCAAGGTCCGTCGCCGAACACCTGCGAGATATGCGGGAAATTATGGCCTACCCGTGTCGATTACTGGAAACACGTGATGGGCGTCCACGCGGACATGGTGCCCTTGATCTGCGGCGTTTGTCTGAAAGTATTTTCCGACGTGGTGCAGTTAAGTGCCCACGTTAAGGCGAAACATTGGCCACTGACCAGTGGTGATTTCAGTTGTGATATTTGCGGTAGGCCGTATTCCAATAAATCCAAAATGTCCCGGCATAGAAAGATCCACGGTTTGGAGGTGGCAGCAGCGGCGGCGGTAGTCGCGGACGTCGCGTGTGATAATAGCAACCTCAACGAAACGACCAACGAATCGATCAAGCTCGAGCACGGCAACAACAGGATTGCTGTAGACGTCAAATTGAAATGCGATCAGTGCCCCGAGCACAAGTTCACGACTCTAGACAGTTTACGCAATCATCGTCGGGTGGTGCACAATCTCTTCCCGTGCGATCTATGCGTCAAGTACTATGGTAGGACGTCGCACTTGTGGAAACATGTGAATAGAGTACACAAGGGTCACGCCGACGTGACTTGTCCATACTGTGCGAAAACAAGCGCGTCGAGAGATCATCTGACGGCGCACATCGCGAAGATTCACAGGTACGTCCCCACCATGGGTAGCAAGGACAATCAGAACTGCGTCGTTTCCAAGTCCTTGAGTACGGAAGATGGTGTTTTACATTATTGCGAGAAGTGTAACAAGGGATTCCACAAGCGTTACCTGCTCCGACGTCATATGAAGGGCTGCCAAAACTATCGTAAGGATCCTGGAGCATTATTGACCCGCTGCCGAGCCTGCGAGAGGATATTCAAGGATCGTGCGAGTCTGCAGAAGCACATCGAGAATCACCACAGCACGTATACCTGCCATTTGTGTAACGAGACCATCACCTCCAAGCTGGGTATCATGACGCACAATCGCGTCAATCATATGGATCACCCGGATCTGACGTGCGAGCATCCAAGCTGTAAGAAACTCTTCCGCACCAAGGAGGATCTCGAGTCTCATCGAAAGGATCACAAGTATCACAGCAACCCGAACGTCTGCGATTTTTGCGGCGACACCGTGGAGAACAAACTCAAGTTGAAGATGCACGTGTTATCGTTACATCGGAACGAGATCGGTGTCTCCTGCGGCGTCTGTCTCATTCCTATGAAGGATCCGAAAGACTTGAAGAAACACGTCGAGGGAGAGCACAGCAGCGTTCTTTCCAATCCGAACACGTGTCAGGTGTGTGGCAAGCAGTACGCGTCCAAGTGGAAGGCTTTCGATCACACGAAGAAATGTCATGGAAAAGTTTTTCTCACGTGCAAACAGTGTTTAGCAGTTTTCACGGACGAGAACGATATACGGGATCACTACGAACACGTGCACAATGTTTCGAAGGACCAATTAGCCGTTTTCGAATATAGAATGGACATGAGTGCGAAGAGGGAAGATTACGAGACGCCCGATATCGTCGTGAAGGAGGAACCGGACGATCTCGAGTACGACGAGGAGATGTGCGACGAGAGCTCGAGTGATTCCCGCAAACGCAGACGATCCCCGAATGATACGTACGATTGCAATATATGTCCCGAGATGTTCCTCAATTCGGACACCCTCGCCAAGCATTATCAGAACGTTCACAATACCAATCCTGTTCATATGTTCAAGAAGTTTAAGAAGAGCAACGGCGACAAGCGTAAAATGAGAAACAGAAACAACTACGAGTGCAAGAATTGCAACAAGAATTTCTCCACCAAGACCCTGTTTTGGAATCACATCAACGCGTGCACGCGACGAAACTCGGTATGCAGATTCGACGCCCCGAATAATATCCCGACATCGATTCTGGAGTCGCATCTGAAGAACAATAATCAGATTCAGCGAGAGGAACCGTTGATGAACGAATCCAACTTGAACATTCCTGACTTCAATCTGTTCGAGGACATCAATCTGCAATTCTCGGCCCAGAAACCGGTGCCGAATCTCATGCCGTTGTCGCAGATGAAGTCTACCGGTAATGGCAAGGTCTCGCGCAAAGACTCGCGCAAGGTGTACGACGAAACGACCAATACCGAGTGCACGTGCGAGGTCTGCGGTAAACAGTGGCCCGCCAAGAAGCACCTGTGGCAACATCTGATTCGCTTCCATCGCGCCGAAGCCGCCGTCACTTGTGGTGTGTGCTTGAAGCTATGCAAATCCTATCAAGACCTGAGTGATCACCTGAAGGCCGAGCACGCCCCTGTTTTGTCGCCGGAGGGCAACAATTTCACGTGCAAGACGTGTGGCAGATATCACAACGCGAGAAGTAAACTGCTGCTGCACATGAGCATTCATATCGGCTACTTCCGGTGCGACAAGTGCCAGCAAGGTTTCGCGAGTGAGGAAAAGCTCGGCGAACACGCGGCAAGTTGCAACGGCAAGTCAGAATTTGAGAATCACGCGGTGACGGCGGATATTGAAGATAACACGAAAAACGACAACGATGAGAAGGGTAGTTTGATCGCCGATGAAACGTCGGTCATCGAAGAGGAAGTTGAAGAAGCGGATTTCGAATCGGAGGGCGAAGAAGGTAGCAGAAGCATCCAAAACGAAGAGAACAATAGCGAGGAAGACAATTCGGATAGCGACGACTCGGATAGTGATAGTAGTTCGAGCGAGAACGAGggcgaggaggaagaagaagaggaggagaagcaggaagaggaagaagaggagaatGAGAACGAATCTGACTCGGACACGAGAAGCTCGAGCGCCGCGAGTGGTGACAGTAGATGTAATTCCGAAAGTGAAGAATCGAATATGACGGATTTGCACATGATGCGGAAGGAAACGATGCAATTCAAAAATATCGATAGGTTCAGGATACACGAAGAGAACTCGGCGATGGAGAAGTACGAGGATCAGAGAACCGCTTCCGTTATCGCGGCGACGGATGCAGACCAAAATAAACAGAGTAATTTGAATAACTTACTGATTCCCGGTGCACCTACAAACGTAGACAAATTTAAGGCGGTGCGTCTCCAGGAATCCACTGCAGCTACGGCAAGTGACTACTCCAATGACAACGAGAATGATAACGAGGAAGATGACGAAGAGGAAAACAATGAAaacgacgaagaagaagagggCGATGAGGATGAAAGTGAGGGTGAAGGTGAAGGTGAAGATGAAGATGAAGATGAGGGTGAGGGTGAAGATGAGGGTGAAGATGAGGGTGAAGTTGAAGATGATAATGAAGATGAAGATGAAGGTGAAGGTGAAGGTGAAGGTGACGTTACAAGCGAGGCCGAGGCTGAGAGTGGAGAAGATGAAAACGATGGCGAAAATGACGCTAAAgatgaggaggaggaagaagaagaagaagaagaggggGAGGAAAACGAtgaggacgacgacgacgacgacgacggacCGCCTGTGCTGAGTCCGATAATGCCTTTGTTACCAGAAAACGAATCCGAAGAGCACAGCAATACGATGGATCGTACAAGGCATAAGCTTAGTCCGATGATATCGCTGAATATGGACAAGTTGATGGAGGGATGCGAGATAACGGAGATTAAAACTGACGGGGAAAATACGGCGGCACCGTCGAATGAGTCCAACTTCTTCGTGGCTAATAACAACGATCTACCCGTGACATGGGACGACGAGGATGATGCACGCGATTGCGATTCCGACGCCGAAGACAGAGATGTGATGGTGGTGAAGAACGAGGAAGAGTTTGTCAAGAGGAACATCAACGATCTGGAGGGCGACGACTACCAGGAAGATTCCGCGGATGAGAACGTCATGGACGATGATAGAGATGATGATAGTGGGGAACAGGTGCACGAGATACATAGCCTAGACGGGACAGTGTTAATGATGACTAATGACGCGGAAGGTAATCCGATTTTGATACAGCATAACGTGTTAGATATCGATAACGAGGACTCTAACGCCGAGGAGGCACAGTATATTTACCCAGGGAATACTTACGAGATCGCGGAAGAGGCGgaggacgaggaggaggatTTTGCGACGCGAAACGAAACCGACGTCACGCAGACTGAGATACAAGGTATGTCCTATGTTCAGGATGTGTCGGAGAACGAGGACGAGAGCGGGGGGGATGAAAATGTAGAGGAGAATAGTAGTGACGCCCAGAAATAG
Protein Sequence
MESARNVTIAPMSATTSTRMTSSSTTTMPMERRRSYHDLCRLCASYDNVSMHIFGQEGINRQLVDKIQTCLPFKIEEDDRLPKVLCYRCMYNLENFYDFRTACVNAAAWLERNRPKEGTNDDGANDSAQCSEMHAELFKGKENMPIFIPEAPVVNPNAALGTPPRLNSDGEAEIEPEILDASEGTDEVLDDSTEDRRSEIDYEEGYEMDMETNPSDFLEMTPMVTEENEEECVANNTSAAATGQQDVAAVFPPTSQQHEVYVCSLCNKAFSSKGHLSLHARIHVGEGDVIGERVITDDHTSYQRPYQCDLCHKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRYNLEEHIKSRHAGLPPPPELSVSLARPETRYQCQTCPMVYKDLADFNAHRQICEEQRSDLLGQADASNNKSVIDVSDMSSTADSDDENKDFRSAEAKLAKNPNLTILKHALTKGDSLKRNYDDDGSTSSCKTRKMVKIEGETNPEIKRWYCESCPQSFTSVDSLKLHEVRHDAEKPFICILCKKDFVLKSSLIRHITTAHGVDPTPIIESDKCLKTSVMPQNWNRMDVSIYEQSEIKEPPEFSSSPEINLDNDDKDSKNNHENVEIETVFMCEICTRDFNDRASLWLHMRATHKELAAFACGVCLKICNDNTQLQSHLYMYHGKSKLLISEQRRYSCTICGRQHDSRKKLIAHVSIHNIDSGLDPAIFVQLNSNYYNENLNGTEGNEQVIDFDGEDSEKVDCYICCKPFPSEDHLIRHQRNAHKPEQIIPSGDAAGSGNAANVNGNGNRAQYHLFFVCEICGSSHSSKWERWLHINNMHSNESSIKCEYENCGKIFATKLLRNDHYQHHLIQGPSPNTCEICGKLWPTRVDYWKHVMGVHADMVPLICGVCLKVFSDVVQLSAHVKAKHWPLTSGDFSCDICGRPYSNKSKMSRHRKIHGLEVAAAAAVVADVACDNSNLNETTNESIKLEHGNNRIAVDVKLKCDQCPEHKFTTLDSLRNHRRVVHNLFPCDLCVKYYGRTSHLWKHVNRVHKGHADVTCPYCAKTSASRDHLTAHIAKIHRYVPTMGSKDNQNCVVSKSLSTEDGVLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNETITSKLGIMTHNRVNHMDHPDLTCEHPSCKKLFRTKEDLESHRKDHKYHSNPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEGEHSSVLSNPNTCQVCGKQYASKWKAFDHTKKCHGKVFLTCKQCLAVFTDENDIRDHYEHVHNVSKDQLAVFEYRMDMSAKREDYETPDIVVKEEPDDLEYDEEMCDESSSDSRKRRRSPNDTYDCNICPEMFLNSDTLAKHYQNVHNTNPVHMFKKFKKSNGDKRKMRNRNNYECKNCNKNFSTKTLFWNHINACTRRNSVCRFDAPNNIPTSILESHLKNNNQIQREEPLMNESNLNIPDFNLFEDINLQFSAQKPVPNLMPLSQMKSTGNGKVSRKDSRKVYDETTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCKSYQDLSDHLKAEHAPVLSPEGNNFTCKTCGRYHNARSKLLLHMSIHIGYFRCDKCQQGFASEEKLGEHAASCNGKSEFENHAVTADIEDNTKNDNDEKGSLIADETSVIEEEVEEADFESEGEEGSRSIQNEENNSEEDNSDSDDSDSDSSSSENEGEEEEEEEEKQEEEEEENENESDSDTRSSSAASGDSRCNSESEESNMTDLHMMRKETMQFKNIDRFRIHEENSAMEKYEDQRTASVIAATDADQNKQSNLNNLLIPGAPTNVDKFKAVRLQESTAATASDYSNDNENDNEEDDEEENNENDEEEEGDEDESEGEGEGEDEDEDEGEGEDEGEDEGEVEDDNEDEDEGEGEGEGDVTSEAEAESGEDENDGENDAKDEEEEEEEEEEGEENDEDDDDDDDGPPVLSPIMPLLPENESEEHSNTMDRTRHKLSPMISLNMDKLMEGCEITEIKTDGENTAAPSNESNFFVANNNDLPVTWDDEDDARDCDSDAEDRDVMVVKNEEEFVKRNINDLEGDDYQEDSADENVMDDDRDDDSGEQVHEIHSLDGTVLMMTNDAEGNPILIQHNVLDIDNEDSNAEEAQYIYPGNTYEIAEEAEDEEEDFATRNETDVTQTEIQGMSYVQDVSENEDESGGDENVEENSSDAQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00868271;
90% Identity
iTF_01077657; iTF_00869056;
80% Identity
-