Basic Information

Insect: Popillia japonica
Gene Symbol: Zfpm1
Assembly: GCA_004785975.1
Location: SMLS01073895.1:4519-11450[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1 1.6e+02 3.8 0.0 2 23 7 28 6 28 0.94

2 15 0.15 22 6.5 3.8 1 23 532 554 532 555 0.96

3 15 0.0078 1.2 10.5 0.0 3 23 635 656 634 656 0.94

4 15 6.7e-05 0.01 17.0 3.2 1 23 664 686 664 686 0.98

5 15 4.4e-05 0.0066 17.6 2.2 2 23 689 710 688 710 0.97

6 15 0.25 38 5.8 1.1 1 10 716 725 716 738 0.82

7 15 1.4e-05 0.0021 19.1 5.3 2 23 745 766 744 767 0.95

8 15 0.49 73 4.9 1.3 6 23 781 798 779 798 0.95

9 15 0.00013 0.019 16.1 3.6 3 23 805 826 804 826 0.97

10 15 0.037 5.5 8.4 0.0 2 23 842 862 841 862 0.96

11 15 2.2e-05 0.0032 18.6 1.7 1 20 868 887 868 890 0.92

12 15 0.00019 0.028 15.6 0.1 1 23 898 920 898 920 0.98

13 15 0.00063 0.094 14.0 3.7 1 23 926 948 926 948 0.98

14 15 7.6e-07 0.00011 23.2 3.0 1 23 954 976 954 976 0.98

15 15 0.00028 0.042 15.1 7.5 1 23 982 1004 982 1005 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1	1.6e+02	3.8	0.0	2	23	7	28	6	28	0.94
2	15	0.15	22	6.5	3.8	1	23	532	554	532	555	0.96
3	15	0.0078	1.2	10.5	0.0	3	23	635	656	634	656	0.94
4	15	6.7e-05	0.01	17.0	3.2	1	23	664	686	664	686	0.98
5	15	4.4e-05	0.0066	17.6	2.2	2	23	689	710	688	710	0.97
6	15	0.25	38	5.8	1.1	1	10	716	725	716	738	0.82
7	15	1.4e-05	0.0021	19.1	5.3	2	23	745	766	744	767	0.95
8	15	0.49	73	4.9	1.3	6	23	781	798	779	798	0.95
9	15	0.00013	0.019	16.1	3.6	3	23	805	826	804	826	0.97
10	15	0.037	5.5	8.4	0.0	2	23	842	862	841	862	0.96
11	15	2.2e-05	0.0032	18.6	1.7	1	20	868	887	868	890	0.92
12	15	0.00019	0.028	15.6	0.1	1	23	898	920	898	920	0.98
13	15	0.00063	0.094	14.0	3.7	1	23	926	948	926	948	0.98
14	15	7.6e-07	0.00011	23.2	3.0	1	23	954	976	954	976	0.98
15	15	0.00028	0.042	15.1	7.5	1	23	982	1004	982	1005	0.96

Sequence Information

Coding Sequence: ATGGATAGTGAGAATATCGTGTGCCCTGTCTGTACTCTATTTCTAAGACCCGGTATAACATTAAAGGCTCATCTAAGCAGCCACCCTAAACAGAAAGTAATTGAGGCCCTAGTGCGGATATCAAATAGTGAAAATGAAACCAAGACGCAAGTTAGTACCTCaattcaaaatgaaaatttgatagGTTCCACGAACACTGTGACATCTAACAGTCAACAGTGGAATTCCACGACGATGCCGGTAAATACAGTTTATCCCAATTTTAACGCAATACCAGGAAATCATTCGTTCATCTATCAGCAGTTTATGAGCTCGTCGACACCGCCCCCGAATGTTCTCAATGTTAATCCTTTAACGCAGCAAATTGTTACAATTCCGACAGTATTTAATTCGCAGATGATGTGCCCACCTTACGTTTATCAACAACAGCAAGTTATAATGTCGTCGGGGCCTTCTGTAATGTCGATAGTACCGAAACCGTTACCTATTGAGCTTCCTGCATCATCAAACCAAGAAAGTCGAATAAACGCGATCGAAACCGAAGATGATCAGGAAGAAGATGAACCGGATTTGGTTACTGTCGAGATTTCAGAAGTGAGTAAAAATGACGAGGTAAATTTAGAGACTGACAAAGCTGATAGTGACGATGAGACggaattgaataaaattgaatctCAAATAAACGACATTAAAGACAATTCCGATTATAAAATTGAGGTATCGCAAAGTAAAATCATGCAGGGCAGCTCGATGATCTCAAACGAAACTATCCAGCAAGAAATTTCCGAAAATGTAATTGAAGAATGCGTGAAGAATACTGTATGTGATGAGGGGGTGAATGCCCCGGAAGTCGAGGATGAGTATGGGATGGATTTTCATGTGGATTTAAATAAATCGTGTCAAACACAGACTGTGAGTAATTATGGGGATGTAAGTGGAGCAAACGAGGAGGAGGAAATAGCACAGATTCCAAACGAAGCTGAGAATAAACCGAGTTGCTATTATACCGAGGTACAAGAGAGTATTACTAACACAAACTACACCATCCTCCAGAATAGCTACGATCAAACCGAGTCTACGTACACTTCCACGCATACAGAGAGCCTTTTCGCGAGATCCCACGAACAAAACACGACTAGCGTTATAGATATGGACGGGATGAACCTCTTCATAAACACCGATTTTTTAAACAACCACTTAGTGTCGCAGGTAGACGATTTCGAATGCGCCAACACCGACAGGCCccgtataattttaaatttgggcGGTTTGGACGCGAATTTCGTCAACCGCGACAATAACGACGAGAGTTTGAGCAGGGAAAGCGCTAATATTAGAACGGACGAACATATGCCGCCGCGCGGCGAATTATCCGGGCAAGAAAGTAACGGCGGCACCAGCGATGTTAATTGGAACCGTTTACAATACCAAGAGGTGTGCAGTTCGTACGATCTCATCGCCAGGGAAAATTGGAACGACGACATCTCAGATACCGAACCGAATTCGGCTCCCAATCAGAATAGCAATCCGATTCTATCGAATTGCGATGACGATACACCGACCGTCTCCGGTTTCCGGGAACCCCCAATCACGTATAAGTGCCCTACTTGCGGGGACTCCTTTAATTGCCCCAAAGAGAGGCGGGTGCATCAGAGGGAGCACCATAACATTCCGGAGAAGAAGGAGAAGGAGATTGGGAGTCAAATCGGCGGGAAACGGGTCAAGAAATTGACGATTAAACCGAAGAAGGCCGATATTAAAACGGAAAACAATTTCGATAATGTTTTTACGAATCGGTTAAAGTTGGAGGCGAGCGTTGAAGGTGATAGGTGCGACGTTACACCCCAAAACGAAATCGAAGTACAAAAAAAGGAAGACGTCACTGTAAATAATCCGAATATCTGTACAGTTTGTGATATGGTCGTCGCTGATAACAACGCCCTCAAACAACACCAATTAGAAGCTCATAACTTATCGTCGGAAGTTAGGCACAAATGTAAGACGTGCGAGGAGACTTTCCCTAACGAATCGAAGTATACGGAGCATCTGCGTACTCATCCTTTAGAATGTAGATTATGCGGGAAATATTTCTACCGGAAGCAAAATATGCAGTTGCATATGAAGAGGCATCTCGGGATTAAGCCGTACAAATGCAATATATGCGAGAAGGCGTTTTTAACGAAGCAAAAACATGATGAGCATAAGAATATCCATACGGGGGATACGCCCATTAAATGCAACATGTGCGACGAGACGTTTCGGAGGCATTCGAATTTGGTGCAGCATAGGAATCGGCACCATTTCAATATGAAGCGGAAAATGAAGGATTACGTTTGTTTCTGTGGAGAAATTTTTCACTCTAAACGAAAACTAGCATGGCACAAGGAGATCCACGATCCGAAACCGAAAGCCTGCAGTCACTGCAGCGAAAAATTCATCCACATGTCTAGTCTGACGCGGCACATACGCCGAGCCCACAATGAACGTTTCCTGCCCAACAAGGAGAGGGTCTCCGAGAACGTCGAATGCCCCATCTGCAAGGGCGTATACTTGCGCTCCTACCTAGAGGTGCACATCCGAAATCACAGCGGTCACAAGCCGTTCACGTGCCTGATCTGCAACAAGAGTTTCACGACGAAGTGGAACCTGAAGCTGCACAAATGGACGCACGCGTCGCGCACGGCCAAACCGTTCAAGTGCGATATGTGCAAGGGGGCCTTCATCAGGGAGTCCGATTACATTGCTCACATGAACGCTCACAAATCCGTTAAGCCGTACACGTGTAATTATTGCGGGGCGCAATTCATTAGGAAGTATAATTGTCAGAGGCATGTCAAGGAGCACGAGAAAGTTAAGACGTTTTCGTGTCAAGTTTGCGGTAAATCGTTTCATAGATCTTATTATTTAAAAGACCATATAAGGGTGCACAGCGGGGTTCGCCCTTACACGTGTCATATTTGCGGTAAAACATCAACGACGAAATCCAACCATAACAAGCACGTTAGGATCCATCATGCAAGGGAGCCCGTCAGTACCGAGAACTAG
Protein Sequence: MDSENIVCPVCTLFLRPGITLKAHLSSHPKQKVIEALVRISNSENETKTQVSTSIQNENLIGSTNTVTSNSQQWNSTTMPVNTVYPNFNAIPGNHSFIYQQFMSSSTPPPNVLNVNPLTQQIVTIPTVFNSQMMCPPYVYQQQQVIMSSGPSVMSIVPKPLPIELPASSNQESRINAIETEDDQEEDEPDLVTVEISEVSKNDEVNLETDKADSDDETELNKIESQINDIKDNSDYKIEVSQSKIMQGSSMISNETIQQEISENVIEECVKNTVCDEGVNAPEVEDEYGMDFHVDLNKSCQTQTVSNYGDVSGANEEEEIAQIPNEAENKPSCYYTEVQESITNTNYTILQNSYDQTESTYTSTHTESLFARSHEQNTTSVIDMDGMNLFINTDFLNNHLVSQVDDFECANTDRPRIILNLGGLDANFVNRDNNDESLSRESANIRTDEHMPPRGELSGQESNGGTSDVNWNRLQYQEVCSSYDLIARENWNDDISDTEPNSAPNQNSNPILSNCDDDTPTVSGFREPPITYKCPTCGDSFNCPKERRVHQREHHNIPEKKEKEIGSQIGGKRVKKLTIKPKKADIKTENNFDNVFTNRLKLEASVEGDRCDVTPQNEIEVQKKEDVTVNNPNICTVCDMVVADNNALKQHQLEAHNLSSEVRHKCKTCEETFPNESKYTEHLRTHPLECRLCGKYFYRKQNMQLHMKRHLGIKPYKCNICEKAFLTKQKHDEHKNIHTGDTPIKCNMCDETFRRHSNLVQHRNRHHFNMKRKMKDYVCFCGEIFHSKRKLAWHKEIHDPKPKACSHCSEKFIHMSSLTRHIRRAHNERFLPNKERVSENVECPICKGVYLRSYLEVHIRNHSGHKPFTCLICNKSFTTKWNLKLHKWTHASRTAKPFKCDMCKGAFIRESDYIAHMNAHKSVKPYTCNYCGAQFIRKYNCQRHVKEHEKVKTFSCQVCGKSFHRSYYLKDHIRVHSGVRPYTCHICGKTSTTKSNHNKHVRIHHAREPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00626504; iTF_00627628; iTF_01121068; iTF_00956498; iTF_00434345; iTF_01499085;
90% Identity: -
80% Identity: -