Basic Information

Insect: Trypoxylus dichotomus
Gene Symbol: Sall1
Assembly: GCA_014905495.1
Location: BNES01000021.1:2555533-2568623[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.4 1.2e+02 3.8 0.0 2 23 7 28 6 28 0.94

2 15 0.0047 0.42 11.6 3.3 1 23 532 554 532 555 0.96

3 15 0.01 0.94 10.5 0.0 3 23 636 657 635 657 0.94

4 15 0.00014 0.013 16.4 3.8 1 23 665 687 665 687 0.98

5 15 5.9e-05 0.0053 17.6 2.2 2 23 690 711 689 711 0.97

6 15 0.49 43 5.3 1.2 1 10 717 726 717 739 0.82

7 15 1.9e-05 0.0017 19.1 5.3 2 23 746 767 745 768 0.95

8 15 0.66 59 4.9 1.3 6 23 782 799 780 799 0.95

9 15 0.00018 0.016 16.1 3.6 3 23 806 827 805 827 0.97

10 15 0.05 4.4 8.4 0.0 2 23 843 863 842 863 0.96

11 15 0.00024 0.021 15.7 1.2 1 20 869 888 869 891 0.91

12 15 0.00022 0.02 15.8 0.2 1 23 899 921 899 921 0.98

13 15 0.00085 0.076 14.0 3.7 1 23 927 949 927 949 0.98

14 15 1e-06 9.1e-05 23.1 3.0 1 23 955 977 955 977 0.98

15 15 0.00038 0.034 15.1 7.5 1 23 983 1005 983 1006 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.4	1.2e+02	3.8	0.0	2	23	7	28	6	28	0.94
2	15	0.0047	0.42	11.6	3.3	1	23	532	554	532	555	0.96
3	15	0.01	0.94	10.5	0.0	3	23	636	657	635	657	0.94
4	15	0.00014	0.013	16.4	3.8	1	23	665	687	665	687	0.98
5	15	5.9e-05	0.0053	17.6	2.2	2	23	690	711	689	711	0.97
6	15	0.49	43	5.3	1.2	1	10	717	726	717	739	0.82
7	15	1.9e-05	0.0017	19.1	5.3	2	23	746	767	745	768	0.95
8	15	0.66	59	4.9	1.3	6	23	782	799	780	799	0.95
9	15	0.00018	0.016	16.1	3.6	3	23	806	827	805	827	0.97
10	15	0.05	4.4	8.4	0.0	2	23	843	863	842	863	0.96
11	15	0.00024	0.021	15.7	1.2	1	20	869	888	869	891	0.91
12	15	0.00022	0.02	15.8	0.2	1	23	899	921	899	921	0.98
13	15	0.00085	0.076	14.0	3.7	1	23	927	949	927	949	0.98
14	15	1e-06	9.1e-05	23.1	3.0	1	23	955	977	955	977	0.98
15	15	0.00038	0.034	15.1	7.5	1	23	983	1005	983	1006	0.96

Sequence Information

Coding Sequence: ATGGATAGTGAAAATATCGTGTGCCCTGTTTGTACCTTATTCCTTAGACCTGGAATTACATTAAAGGCTCATCTGAGCAGCCACCCAAAACAGAAGGTGATTGAAGCCTTAGTACGAATATCTAGTGGagagaatgaaacaaaaacgCAAGCTAGCACTTCCAATCAAAATGAGAATTTGATTGGTTCAACAAATACAATAACGTCTAATAATCAGGCATGGAATTCGCCATCAATGCCAGTCAATACAGTTTATCCAAATTTCAGTGCCATGCCTGGGAACCATTCTTTTATCTACCAACAGTTTATGAGTTCCTCAACACCACCaccaaatgttttaaatgttaaCCCCCTGACACAGCAATTCGTAACAGTTCCAACAGTGTTCAATTCTCAAATGATGTGTCCCCCTTATGTCTATCAACAGCAGCAAGTTATTATGTCATCTGGACCTTCTGTAATGTCGATTGTACAAAAACCTTTACCGATTGAACTTCCCACATCACCTAATCAGGAAAATAGAACTAGTACAAGTGAAATAGATGGTGATGATCAAGTCGATTTAATTGATGAGCCAGAACTTGTCACTATTGAAATTTCCGAGTTGAATAAGAGCGAAGAAGAAAACCTAAGGGATAAGGAAGGTAACACACTAGAATTAGACAAAGTAGAAACCGAAATAagcgaaattaaagaaaatgctgACTATAAAATTGATGTATCGCCAAATAAAATTATGCAAGGCAATACGATAATTACTAGCTCAAATATTGCAAGGGACATCTCGGAAGATCCAATTGAAGACTGCATAAAGGACTCAGAATGCGAAAGTGCTTTAACGGAAGTTCATGACTCCGAACAGGAATATTCGGTGGAATGTGATGTTGATTTGAATAAGTCGTGTCAGACGCAAACTGTAAATAATTTCGGTGAAGTCGCTGTTGATGAGGAAGAAGAGGTGATAGAGATCCAAAACGAGCCCGAAAATAAACCTGGCTGTTATTATGCAGAGgtGCAGGAGAGTATTACCAACACAAATTACACCATCCTTCAAAACAGTTACGAACAAGCCGAATCCACCTACACCTCTACCCACGCAGAAAGTCTGTTTGCGTCAAGATCTCACGAACAAAACACGGCCAGCGTAATCGATATGGATGGAATGAACTTGTTCATCAACAGCGATTTTTTAAACAATCACCTAGTGTCGCAAGTGGACGAGTTCGAGTGCGCCAACAACGAACGGCCACGCATCATTCTAAATTTAGGCGGTATGGACAACAACTACATCAGTCGCGACAACAACGATGAAAGTTTAAGTCGGGAGAGCGCTAATATCAGGACTGACGAGCATATGCCTCCCAGAGGCGAGTTATCCGGACAAGAAAGCAACGGCGCCACCAGCGATGAGAACTGGAACCGAGTGCAGTACCAGGAGGTGTGCAGTACTTACGATCTCATCGCCAGAGAGAATTGGAATGACGACATATCCGATTCCGAGCCGAATAGTGCGCCGAATCAAGCTCACAATCAGATATCGAATTGCGACGATGACACTCCTACCGTTTCGGGTTTTCGGGAACCCCCGATCACCTACAAGTGTCCGACATGCGGCGAATCTTTTAATTGTCCCAAAGAAAGGAGAGTCCATCAGCGAGCACACCACAGCATCGCCGAGAAAAGGGATAAAGAGATCGGAGGTCAAATCGGCGGTAAACGCGTTAAGAAATTGACGATAAAACCTAAAAGAAATGACATAAAAACGGAAAACAATTTCGACAACGttttcacaaataaattaaaactagaaTCTAATAATGAGAATGATAAGTGCGACGTCATGCCGCAAACTAACGAAATAGAAGTACAAAAAAAGGAAGACGTCGCTATAAGCAACCCGAACATATGCACTGTCTGCGATATGGTGGTCGCCGATAATAACGCCCTCAAACAACACCAACTTGAAGCTCACAATCTCTCGTCAGACATCCGGCACAAATGTAAGACCTGCGAACAGACCTTTCCCAACGAATCTAAGTATACCGAACACCTCAGGACGCATCCTCTCGAATGTAGACTGTGCGGAAAATACTTCTATCGTAAACAGAATATGCAGCTGCATATGAAGAGGCATCTTGGTATTAAGCCCTTCAAATGCAACATCTGCGAGAAGGCATTCTTAACGAAACAAAAGCATGACGAACATAAAAATATTCACACTGGTGATACCCCTATCAAATGTAATATGTGTGATGAGACCTTTCGGAGGCACTCAAATCTTGTACAGCATAGGAATAGGCATCATTTCAATATGAAGCGGAAGATGAAGGACTACGTTTGTTTTTGCGGagagATTTTTCACTCTAAACGAAAACTAGCATGGCACAAGGAGATCCACGACCCCAAGCCGAAAGCGTGCAGCCATTGCAGCGAGAAGTTTATCCACATGTCCAGCCTGACGAGGCACATCCGGCGCGCTCACAACGAACGCTTTCTGCCGAACAAGGAACGGGTCTCCGAGAACGTCGAGTGCCCGATCTGCAAGGGTGTCTACCTCCGTTCCTATCTCGAAGTGCATATACGCAACCATAGCGGACATAAGCCGTTCAATTGCCTCATCTGCAACAAGGGCTTCACCACCAAGTGGAATCTGAAACTGCATAAGTGGACTCACGCGTCGCGTACGGCGAAGCCGTTCAAGTGTGATCTGTGCAAGGGCGCTTTCATTAGGGAATCGGACTATACGGCCCATATGAACGCTCATAAGTCGGTAAAACCGTACACGTGCAATTATTGCGGCGCTCAGTTCATCAGAAAGTACAATTGTCAGAGGCACGTCAAGGAACACGAGAAGGTGAAGACGTTTTCGTGTCAAGTTTGCGGGAAATCTTTTCATAGATCTTATTACTTAAAAGACCATATAAGGGTACACAGCGGCGTCCGTCCGTACACGTGTCACATTTGCGGAAAAACCTCGACCACGAAGTCCAATCACAACAAACACGTACGGATTCACCACGCCAGAGAACCTGTGAGCACCGAGAACTAG
Protein Sequence: MDSENIVCPVCTLFLRPGITLKAHLSSHPKQKVIEALVRISSGENETKTQASTSNQNENLIGSTNTITSNNQAWNSPSMPVNTVYPNFSAMPGNHSFIYQQFMSSSTPPPNVLNVNPLTQQFVTVPTVFNSQMMCPPYVYQQQQVIMSSGPSVMSIVQKPLPIELPTSPNQENRTSTSEIDGDDQVDLIDEPELVTIEISELNKSEEENLRDKEGNTLELDKVETEISEIKENADYKIDVSPNKIMQGNTIITSSNIARDISEDPIEDCIKDSECESALTEVHDSEQEYSVECDVDLNKSCQTQTVNNFGEVAVDEEEEVIEIQNEPENKPGCYYAEVQESITNTNYTILQNSYEQAESTYTSTHAESLFASRSHEQNTASVIDMDGMNLFINSDFLNNHLVSQVDEFECANNERPRIILNLGGMDNNYISRDNNDESLSRESANIRTDEHMPPRGELSGQESNGATSDENWNRVQYQEVCSTYDLIARENWNDDISDSEPNSAPNQAHNQISNCDDDTPTVSGFREPPITYKCPTCGESFNCPKERRVHQRAHHSIAEKRDKEIGGQIGGKRVKKLTIKPKRNDIKTENNFDNVFTNKLKLESNNENDKCDVMPQTNEIEVQKKEDVAISNPNICTVCDMVVADNNALKQHQLEAHNLSSDIRHKCKTCEQTFPNESKYTEHLRTHPLECRLCGKYFYRKQNMQLHMKRHLGIKPFKCNICEKAFLTKQKHDEHKNIHTGDTPIKCNMCDETFRRHSNLVQHRNRHHFNMKRKMKDYVCFCGEIFHSKRKLAWHKEIHDPKPKACSHCSEKFIHMSSLTRHIRRAHNERFLPNKERVSENVECPICKGVYLRSYLEVHIRNHSGHKPFNCLICNKGFTTKWNLKLHKWTHASRTAKPFKCDLCKGAFIRESDYTAHMNAHKSVKPYTCNYCGAQFIRKYNCQRHVKEHEKVKTFSCQVCGKSFHRSYYLKDHIRVHSGVRPYTCHICGKTSTTKSNHNKHVRIHHAREPVSTEN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01253015;
90% Identity: iTF_00626504;
80% Identity: -